Basic Information

Gene Symbol
Iswi
Assembly
GCA_011638315.1
Location
VBVR01001133.1:18655-21678[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-06 0.0028 18.3 0.0 3 41 797 836 796 836 0.96
2 2 0.0043 6.8 7.4 0.0 3 21 899 918 897 921 0.90

Sequence Information

Coding Sequence
ATGTCCAAGCCGGACGAGAACGCGGACACCGGCGACACCGGGGACAACTCGAACGGGTCCTCGGCGGAGACGACGTCGTCGAGGGGCGGCGACTTCGAGACGAAGCTCGAGACGGACCGCAGCAAGCGGTTCGACTATTTGCTCAAGCAGACCGAGATATTCTCGCACTTCATGACAAACAATCAGAAGGACAAGGCTGGCAGCCCGCTGAAGATCAAGGCCGGCAGGCCGAGGAAGCAGCCGGAGATTCCCAAAACTGACTCCGGCGATCACCGGCATCGCAAGACCGAGCAGGAGGAGGACGAGGAGCTGCTGGCGGAGAGCAACGCCAGCGTGGCGCCCACCACGCGCTTCGAGTCGTCGCCGCACTACATCAAGTCCGGTGAGTTGCGCGACTACCAGATACGCGGCCTGAACTGGATGATATCGCTCTACGAGCACGGCATTAACGGTATCCTGGCGGACGAGATGGGCCTCGGCAAGACGCTGCAGACCATCTCCCTGCTGGGGTACATGAAGCACTTCCGAAACATACCCGGCCCTCACATCGTTATTGTTCCAAAATCGACGCTGGCCAACTGGATGAACGAGTTCAAGAAGTGGTGCCCCAGCCTGCGGGCCGTCTGCCTGATCGGAGACGCCGAGACCAGGAACACCTTCATCCGGGACGTGATGATGCCCGGCGAGTGGGACGTATGCGTGACGTCTTATGAGATGGTCATCAAGGAGAAGTCTGTATTCAAGAAGTTCAACTGGCGCTACATGGTGATAGACGAGGCCCACAGAATAAAGAACGAGAAGTCTAAGCTGTCGGAGATCCTCAGAGAATTTAAAACCACTAATCGGCTCCTTCTGACGGGCACGCCGCTTCAGAATAATCTTCACGAGCTGTGGTCTCTGCTGAATTTCCTTCTACCGGATGTATTCAACAGCTCCGACGACTTTGACTCGTGGTTTAATACAAATAGTTTTCTAGGTGATAATTCCTTAGTCGAGAGACTGCACGCTGTTCTGAGACCGTTCCTCCTGCGACGCCTGAAGTCCGAGGTGGAGAAGGGACTCAAACCGAAGAAAGAGATCAAGGTGTATATCGGTTTGAGCAAAATGCAAAGAGAATGGTATACCAAAGTGTTGATGAAGGATATAGACATTGTAAACGGCGCGGGGAAGATCGAGAAGATGAGGCTGCAGAACATTTTGATGCAGCTGCGAAAGTGTTGCAATCATCCATACTTGTTCGACGGCGCCGAACCCGGGCCGCCGTACACTACCGACGAGCATCTCGTTTACAACTGCGGCAAAATGGTGATACTTGATAAATTGTTGCCAAAATTGCAGCAGCAAGAATCTCGAGTTCTGATATTCAGTCAGATGACAAGAATGCTGGATATCCTAGAAGACTATTGCCACTGGAGGACTTTCCAGTACTGTCGACTCGACGGCAACACCGCTCACGAGGACCGACAGCGGCAGATAAACGAGTACAACGCGCCCGGAAGCGAGAAGTTCATTTTTATGCTGTCGACTCGCGCCGGTGGTTTGGGTATCAACTTGGCGACTGCCGACGTGGTCATCATTTACGATTCAGACTGGAATCCGCAGATGGACTTGCAGGCGATGGATCGTGCGCATCGTATAGGCCAACAGAAGCAGGTGCGCGTTTTCAGGTTTATCACGGAGAATACGGTGGAGGAGAAGATCGTCGAGCGGGCCGAGGTGAAGCTGCGTTTGGACAAGCTTGTCATCCAGCAGGGACGACTGGTCGATGCCAAGCAGACGGCTCTGAACAAGGACGAGATGCTGAACATGATCAGGCACGGCGCGAACGAGGTGTTCGCGTCCAAGGACAGCGCCATCACAGATGAAGATATAGACACGATACTGCAAAAAGGCGAAGCCAAAACGGAGGAGATGAAGCAGAAACTCGAGAGTCTCGGGGAGTCTTCGTTGCGTAATTTCACCGTCGACGCGCCGACGGACTCGGTGTACCAGTTCGAGGGCGAGGATTATCGCGAGAAGCAAAAGATCCTCGGAATCGGCAACTGGATCGAGCCGCCGAAACGCGAACGTAAAGCCAATTATGCCGTCGACGCCTACTTCAGAGAAGCGTTGAGGGTGTCGGAGCCGAAGGCACCGAAAGCACCGAGACCACCGAAGCAGCCGATAGTACAGGACTTTCAGTTCTTCCCACCACGACTCTTCGAGCTGTTGGATCAAGAGATTTACTATTTTCGACAAACGGTCGGGTACAAGGTCCCGAAGAATCCTGAGCTCGGTTCAGACGCCGCTCGAATTCAGAAGGAGGAGCAGCGTAAGATCGACGATGCTCAGCCACTCACCGACGAGGAAATCGCCGAGAAGGAAAAGTTGCTACTTCAAGGCTTCACTAATTGGACGAAGCGTGACTTCAATCAATTCATCAAGGCGAACGAGAAATACGGTCGCGATGACATTGAGAACATAGCGAAGGAGGTCGAGGGGAAGACGCCGGAAGAGGTTATGGAGTATTCGGCCGTCTTCTGGGAACGTTGCCACGAACTGCAGGACATAGATCGCGTGATGGCACAGATCGAGCGCGGCGAGGCCAAGATACAGCGACGCGCCGGCATCAAGAAGGCCTTGGACGCGAAAATGGCCAGATACCGCGCGCCCTTCCACCAGCTCAGGATAGCCTACGGCACGAACAAGGGCAAGAACTACACCGAGGAGGAGGACAGATTTCTCGTTTGTATGCTGCACAAGCTTGGATTCGACAAGGAGAACGTGTACGAGGAGCTTCGCGCCACGGTGAGATCGGCGCCGCAGTTCCGCTTTGACTGGTTCGTCAAATCGCGCACCGCGCTGGAACTGCAACGTCGCTGCAACACGCTGATAACTCTGATAGAGCGCGAGAATCAGGAGCTCGAGGAACGCGAGAGAcaggagaggagaaagaaggGTAGCAACATAGGAACGAAGCCGACGTCGAAGCGAAAGGAGAACTTGCCGGCGCCGCAGGACAAGCcgcggaaaaagaagaagtaa
Protein Sequence
MSKPDENADTGDTGDNSNGSSAETTSSRGGDFETKLETDRSKRFDYLLKQTEIFSHFMTNNQKDKAGSPLKIKAGRPRKQPEIPKTDSGDHRHRKTEQEEDEELLAESNASVAPTTRFESSPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRNIPGPHIVIVPKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLGDNSLVERLHAVLRPFLLRRLKSEVEKGLKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRTFQYCRLDGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDAKQTALNKDEMLNMIRHGANEVFASKDSAITDEDIDTILQKGEAKTEEMKQKLESLGESSLRNFTVDAPTDSVYQFEGEDYREKQKILGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRQTVGYKVPKNPELGSDAARIQKEEQRKIDDAQPLTDEEIAEKEKLLLQGFTNWTKRDFNQFIKANEKYGRDDIENIAKEVEGKTPEEVMEYSAVFWERCHELQDIDRVMAQIERGEAKIQRRAGIKKALDAKMARYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRATVRSAPQFRFDWFVKSRTALELQRRCNTLITLIERENQELEERERQERRKKGSNIGTKPTSKRKENLPAPQDKPRKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00305004;
90% Identity
iTF_01508804;
80% Identity
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