Tpar000140.1
Basic Information
- Insect
- Tetramorium parvispinum
- Gene Symbol
- SMARCC2
- Assembly
- GCA_011638315.1
- Location
- VBVR01003032.1:12717-18760[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-15 1.1e-11 45.2 0.3 3 44 641 682 639 684 0.95
Sequence Information
- Coding Sequence
- ATGCTGTCGCTAGGCCCGAAAAAGGACGGCGGACCCAACGCCAAGTTCTTCGAGGCGCCGGAAATTCTCACCCAGCTTGACGGTGTTAAGCAGTGGCTGCTCAAGAACTGCAAGAAGtATGTACAAACGGATCCGCCCACTAACAAGAGCTTAGCCACATTGCTGGTGCAGCTTTTACAGTTTCAGGAGGACAATCTTGGGAAAAATGTATCAAAGCCATCTATGACTAGGCTTCcaaTGAAATGCTTCCTGGATTTTAAGCCTGGCGGTGGAGTGTGTCACATATTAGCCACTGCTTATCGTTTTAAACAGGAACAAGGATGGCGGCGTTTTGATTTTCCTGGTGGAAAATCGGGGTCTCGTATGGATCGTACAGTGGACATGTTGATGGCGGCGGAACGTGCTTTAATACAGAATAGATGTATGACTGTACCAAGTATTTTCGTGAGACCGGATGTTGACAAGAATACAGCTGGAAAAGTGAAAGATATAGTTAGAAAGCATCAGGGGACCGTCGTGGAGAATGAAGCTGATGCTACACACATTATCTATCCTCCAGTAGATCCGATGGAAGAGGAATACGCACGACCCTGTATGAGACGCGAGCGATCGGTTCTAATTCATTGGTATTATTTTCCTGACAGTTATGATTCTTGGTTGACTCTGGATCTTCCATGGGATTATCCCGAAGGGACTTACACAAACACAAATTCAAGatcaATGTATAAAGTATCAGCTACGTGGGCGTTAGATTTAGATCAATATAACGAGTGGATGAATGAAGAAGATTATGAGGTAGATGATAACGGTCAGAAGAGAGTACACAAATATAGACTTTCAGTGGAAGATTTGATGGCACAACCATCTCATCCGCCACCCGCGAAGAAACCTAAGAGAAAACGATCGCCCAGTCCACCTCCAAAGCTTGGCAAGCGTAAAAGTAGCAGAGCACCTTCGGGTATCCAAAGTGCTTCTTCCGCGTCGTCGACAACAGTTCCGAAGAAGTCACGCGGTGGCGATGAAGAGGAAGATCTGACTCAGGGAATGGAAGATCCGCCCGCCGAACCTCGTATTGTCGAGGTGGTCGCTACTCCCACAAATCCTCCAATTACGGGTCAAGGCAATGCTACAACGGGTAACTCCACGTTGGCATCTACCGGTAGTAAAAAGCAAGACAGCGAGCTTCAACCTCTCAAATCTGGCAATTTAACCGATCTTGATGAACAAATGGAAGGAGACAAAGGAAGCTCTCAAGGTGGCCAAGATAGAGAGGAAAGAGATACTAGTAAAGAAAGGGGTGAGGGTGGCAAAGGCGACGAACCGGAAGACAATGTAACAGAACAGACGCATCATATCGTTGTTCCTAGCTATTCCGCTTGGTTTGATTACAATTCGATTCACACTATAGAGAAGCGAGCTTTATCGGAATTCTTTAACGGCAAAAATAAGTCTAAAACTCCGGAAATTTATCTTGCGTATCGGAATTTTATGATTGACACTTATCGATTAAATCCAACGGAATATATTACATCGACCGCCTGCAgACGGAATTTAGCCGGAGATGTTTGTGCGATAATGCGTGTGCACGCATTTTTGGAGCAATGGGGACTCATTAACTATCAGGTAGACGCAGAGTCCAGACCGACGCCAATGGGACCTCCACCGACGTCGCATTTCCACGTTCTGTCGGACACACCATCCGGTTTGGCACCGGTCAATCCGAATCCGCCGAAAACGCCACAGCCGTCTGCTGCAAAGCTGTTGCTCGACTTGGAGAAGAAACCGGCGAGCGTGACGGGTGCCCTGGGCGCAGAGGAGAAGGCTTCGGCGGGCGCGATGGCAAACTTCGGTTTAAAAATCGACCAATATTCAAGGAAACCGGCAGTCCTGAAAAACAAACAAGCGGCAGGTGCCACGCGCGATTGGACAGAACAGGAGACCCTTCTGCTATTGGAAGGATTAGAATTACACAAGGACGATTGGAACAAAGTATGCGAACACGTGGGCACGAGGACGCAGGACGAGTGTATCTTGCATTTCTTACGTTTACCTATAGAGGATCCATATTTGGAAGAAGGTGGTCCCGAAGGGTTGGGTCCATTGGCTTACCAACCAGTACCGTTTTCAAAAGCCGGTAATCCTGTTATGAGTACGGTCGCCTTCCTTGCATCGGTCGTGGATCCTAGAGTAGCTGCGAGTGCGGCAAAGGCAGCTATGGAAGAGTTTGCCGCGATAAAAGATCAAGTACCAGCCGCATTAATGGAccagcatttaaaaaatgttcaagcTAGCGCTAATTTAGATGgtAAATTTGATCCAGCGGCGGGATTGGCACAATCAGGCATCGCTGGCACAGGGCCACCTGAACCGCCTGACGATACAGCGGCATCTACTGCGACAACGACTCCGTCTGTACCAGCGGGTGCGGCTAGCTCTCCTCATTCCACAGCTCCGACTCCCGAAGCGAAGAAAGAGGAACAAGAAAAAGGTAAAGACGCTATGGAAGTCGAACAAACTCAAGTAGACGTTACGAAGAAAGAGGACGAATCGAAAGAAGGCGAAGAAGACACAAAATCTACCACTGATCCAGAAGCTGCTGAagcgaaagagaagaaagataagGTGGTAAGGGACGCTCAGCTTCAATctgcggcagcggcagcgctAGCAGCCGCAGCTGTTAAAGCCAAACATTTAGCAGCAGTTGAGGAACGCAAGATCAAGTCATTGGTTGCGTTACTAGTCGAAACGCAGatgaaaaaattggaaattaagTTGCGTCACTTCGAAGAATTGGAAACCACAATGGAGCGTGAACGCGAGGGTCTCGAGTATCAGCGGCAGCAACTTATCACCGAGCGACAACAGTTCCACCTCGAACAATTGAAGGCAGCCGAGTTTAGGGCCCGACAGCAAGCTCACCAGCGACTTGCCCAGgaacagcaacaacaacaacagcagcaacaacagaaTCAACAACATCCGCCCTGGCAACCACCTGTAacgcaacaacaacagcaacaaccACCAAGTCCACAGGCTCAACCGCAACAGCCGCCACCGCACACGCCACCGCAGCAGACATAA
- Protein Sequence
- MLSLGPKKDGGPNAKFFEAPEILTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLLVQLLQFQEDNLGKNVSKPSMTRLPMKCFLDFKPGGGVCHILATAYRFKQEQGWRRFDFPGGKSGSRMDRTVDMLMAAERALIQNRCMTVPSIFVRPDVDKNTAGKVKDIVRKHQGTVVENEADATHIIYPPVDPMEEEYARPCMRRERSVLIHWYYFPDSYDSWLTLDLPWDYPEGTYTNTNSRSMYKVSATWALDLDQYNEWMNEEDYEVDDNGQKRVHKYRLSVEDLMAQPSHPPPAKKPKRKRSPSPPPKLGKRKSSRAPSGIQSASSASSTTVPKKSRGGDEEEDLTQGMEDPPAEPRIVEVVATPTNPPITGQGNATTGNSTLASTGSKKQDSELQPLKSGNLTDLDEQMEGDKGSSQGGQDREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKLLLDLEKKPASVTGALGAEEKASAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPAALMDQHLKNVQASANLDGKFDPAAGLAQSGIAGTGPPEPPDDTAASTATTTPSVPAGAASSPHSTAPTPEAKKEEQEKGKDAMEVEQTQVDVTKKEDESKEGEEDTKSTTDPEAAEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLAQEQQQQQQQQQQNQQHPPWQPPVTQQQQQQPPSPQAQPQQPPPHTPPQQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01473111;
- 90% Identity
- iTF_00867330;
- 80% Identity
- -