Tpar016789.1
Basic Information
- Insect
- Tetramorium parvispinum
- Gene Symbol
- Jarid2
- Assembly
- GCA_011638315.1
- Location
- VBVR01009420.1:727-6173[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5 2.1e+04 -3.5 0.1 65 82 160 177 136 178 0.59 2 2 1.6e-23 5.9e-20 72.0 0.1 6 89 1347 1428 1343 1428 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTGAGTCGCAACgacaagagaaaaaggaaggaaggagaCCTGGTGGACCTCATGGAGCCACTTTCAGAATCTCCGAAAAGGACCAAAGTTCATGCACAAAGAAAATTTGCGCAGGGTGCAACCACAGTATTTAATACATCACCTACGCCTGTCAAGGACAAGGAGAAAGCTAAACCTACTACGCTCACTGAATTAATAACTCACAAACGTCCAAATACAGAggattttttaacatttttatgctTCAGAggAACATCTATTTTGCCACCCagtttaaatttcttcaatattggcaacaaaaaagagaaacagggACTTAAGCCAGTTCGAACTTCTATAGAAAAAGCATCTTCTACTAATACTTTCACAGAGATTCAGAAACAAGAAACTATATgccaaaaaaatgttacaaaagtAAAGCCTATTGTCtcgaataagaaaaaagtacCTAGTACGTTACATAAAAACATTACCAAGCTTAAGACAGCTACATCTACGGTCCAAGcgcttaaaaagaaatatcaagaGCAACGCCTTGCTAAACAaagaatcaaaaataaattcaaaactaCTTGTGTTATGAGGACAAGATCGTGTACAGAAAGATCTATGTTGAAGGCTGGTCTTCAGTTGGCGCCGCGAAAATTCTTACCTAGAATCAAGGCGAAGAGACATGGGCTAAGAAGTGCTGTATTGCCAGATAAAACTAACAAACCTTTGTCAAGAACAAAAGTGTTGTCCAAAccaaagaagaaaattaattctaaagcGAAAAATAGTGATACATCGAATACAGATGCGTCATCCGAAGAGAATGATGTCGAAGACAATGAAGAAGAAGAGTTACATGTGGAGAAATCGACATCGCAGATAAAGCGTAACATACAAAGAGGCATCCAAAAAAAGATCTGTACCAGAAGTAAATCAGAGATGAAGAGAGTTACAAGATCATCCAGTAGCACGATCCCCTCGCAGAATCTCTCCAGGAGGCCTACCAGAAAAACGAAGGAAGCAGCTGCTGTATATATGGAAATTCTTGGAAGAAAATTAGTGAGCCCAGATTTAGAAAATGACGATAACATTTCAGTTGAGAGCTTTCCCGAACTACCAAACGCTCGTAGAATAGCGCAAACGGAAAATGAGCTTAAAGCCAAAGTGAAACAGAGCAGTATCAAAACTATCACTAAAACTAAAGACTCAAAAGTTAGCTCCTTCAGTAATAACGCTAAGCGATTGGATAAGAGCAAAAATAACAAGTTGATTTTAAAGAGCAAACGTCTGATGAGGGTGCAGAGATATTGCGAAGAAGATAGCGACGAAGAATCTGAGAGTTCAGTAGAAACGAACAATACGAGACCAATTACCAGACAGAGTCTTGGAAAGATTGACAAACCGATTAGCAGGAGTCTTAGATCATCTTCCAAAAGCACAACTATACAAACAGAAATACAAAGTAACGTAAATAGCAAACCGAAGACCCAGGttcaaagttatgtaaaaacagttaaagaaaaattcgtgATAAAGCGTAAACGTGagcaaaatatatctaaaacatTGTCGGTTAAGATTAAGCAAAAAAGTCTTAAAAGTAATCAAAACGAGAAACCAGACTCCGAAGAGGAAACGCTGGGAATGTTGCtcagtaaaataaagaagaagaaagaaaatgaggAGAAAGTGGAAGGACAGATTCTTGACAATGTCAATCAtataaaagaaggaaaagtaACTCGCAGCAACGCGCAAAATGTGAAAGCCGATCTGTTGAGGGTATCGGACGACGAGGAATCTTTTCGTGGGTTTACTAAAAAGGCGATatcaaaagtattaaattcatGTCAGACACATGCCAATGTTAATTTGCTAGTCACAGAGTCTGATGAAAAGTTGAATTTGTCTAAAACATTGGACGTATCGCAAACAATGAAGCAAAGCGCTactttacaagaaaataaagtagAAACGTTGTCGATCAAAGCCGGTTCCCCGGTCGCAAATTCCTTCAACGGCGAGTGCAGTGTATCTGGGCAGGATAAAAAATCGGTATTGAATTTGTCCGTAAAAACGCAAAGCTCGTTATTGCCATCTATGGAACAGACGAAATGTAATCACGAAAACGAGATTTCTTCCAATCTTATGCCATTGTCTAATCTGCACACAAGAAAAGAACGAGTGAATATGTCTACCGAACAGATTGAAAAATGGTTGAACGAAAGCTCGTTCGCTAAAGAAGAGAGCAAGTTAGAAATGGAAAACGTTTCCAGTTTTAGGTATGATTcggcgaaagaaaaattaaaggcgGACGTTTCGCATCTGTCTATCTCGACGAAAATTCAACATTTAGTACGCCCCGTCAACGTAACTCTTTCGAAATTGTCGGACAAGACGAATTTGAAAGACCGTGCGGGAATACACAGCCGAAATGTGATACCAGCATCACCGGATATCCACAATACGGGAGTAAAACAACAGAATGCGGTTGTTGACAAGAATAAGATTACTATTGAGACGAAAGAGattgtcaaaaataaaattgagaaaatgaaCAGAGATACTTCTCTTGCTGAAGATACTAGTGATACTGTGTCCAAATCGGACCAAAATTCAGTAGATGGTTCTATAGAGAAGAAATCGCCaacggaaaagaaaatatttcaaccgCGAAAGCCCTTTTTACCCAAGGTTAAAGAACGTAAGATTGTAATACGGAATGCAAACGCGTTTTCGCCGGAAAACGAGAGCAGCGTTTACGCGTTTGAAAGTGACACTGAGGTTCCTGTTAGCACACCGTTCCGGAGAAAGATCAGAGATGATGTGAAACGTTCGACTATCATAATGGAGTCCACAGCGACTGGTAGAGAGGTATCCGAAACCAAGAAATCGAAGGATTCCGAATCATTAAACAGCAAGAAGAAACCGTCGAACGATCCTACGACGCCCGTGAGGAAAGAAGACGCAAAAGAGGCGCAAGGACCGATAAATGTGCCAAACACGGCTCCAAGCGTGAACAAGTTTGAACTGCCCAAGAATTTTGCAAGCTTGACCAGTGTCCAAGTGCTACCGCTCGATAAACTCACAACGAGTTGGAGCAACGTAAATTGCAGCGCTTCCATAGCAGTGCAGGTGAATCTCGATGAGACCATGCAGGAGCAAGAAAGCGATGCGAGTCAGCAGAAAAGTACCGAGATATCCACTCAGACCGAAATGAATAAcgagaacgacgacgacaacgacggaCAGCTGTTTTACATTCCATTACAGGCTGTTACGAGAAGCGGCCCAAATCTGGTGCAAGGTCAACAGCTAATACAGGGTGTCGCCGTTAAGCTTGGCACGGAAGGACCGACTGGTCCTAATCAAAGAGTACTTCTTCGAGCTAAGTTGGTCACTAAGCCACCATTATCCGTGGCACGTTGTCCTCCGATAGGAACGGTACAACCGACAACACGTACTCCGCCCAATCCTACGGCAATTACAGTGGGGCAGCAGGTACCATCGACGTCAACAACGGAGACTGTGTCGACTACGATAGCAAGTATGCCGAGTGCGGAGACGCAATCATTAGCTTTGAAAAATGAAGTCTCGGTGCCAAACCTGAATCGTCAAAATGTCAGTACGAGTGCAAATAGCAGTTTGGAGAAACTCACAAAGTCACCGAAATCGTCTAGGGAAAGGAAAACTTCTATTGATTCGACAAAAAGCGGGAAGAGGGCACAAATGAAATGCAAACAAAGAGGCTTGGACTTATGTTCTTCGAGCAACAGTACGACGTTCCCAGGCACGAAGATGGAGAATGATGAAGCTCGCGTAGTCGAGGCGCCAACATTTCATCCGACAGAGAAAGATTTTCAGGATCCATTGGAGTATATAGACAAGATAAGGCCGGTTGCTGAAAAATTTGGGATATGTAGAGTAGTTCCTCCACCAAATTTTAAGcCGGAATGCAAGGTGTCTGACGATATGAGATTCACTGCTTATAATCAATATGTGCATCGCATGCTTCACAGATGGGGTCCcaatgtaaaagaaatgatggctatcaaaaaatatttagctaCTCAGAATATTACTTTGACTCAACCTCCATGgATTGGCGGAATGGAAGTAGATTTACCTCACTTATATCAAACAGTTCAAAGTTTGGGTGGATTGAAAgaagttattgaaaaaaagaaatggcaGAAAGTAGCAGATGGCATGAAAATACCGAAATCAGCACAGGATCGTGTTACTAAACTAGATgacatttattgtaaatatttactgCCATATGATACATTATCGCCAgagGAACGTGGGAAGTTATTTGATGAGGTGGAAGCTGAATGGATGAGAAAAGAAAGCAAAGCTTTGCAAAGGCAAGAATCCTCCAATGAGaatgatgaagaagaagatgagGACAGTTCTGATGAAATTGAAGAATGCATTGTGAAAGTAGGAATagagtatattaattatttactattcttatttttgttataa
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATTVFNTSPTPVKDKEKAKPTTLTELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNIGNKKEKQGLKPVRTSIEKASSTNTFTEIQKQETICQKNVTKVKPIVSNKKKVPSTLHKNITKLKTATSTVQALKKKYQEQRLAKQRIKNKFKTTCVMRTRSCTERSMLKAGLQLAPRKFLPRIKAKRHGLRSAVLPDKTNKPLSRTKVLSKPKKKINSKAKNSDTSNTDASSEENDVEDNEEEELHVEKSTSQIKRNIQRGIQKKICTRSKSEMKRVTRSSSSTIPSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNISVESFPELPNARRIAQTENELKAKVKQSSIKTITKTKDSKVSSFSNNAKRLDKSKNNKLILKSKRLMRVQRYCEEDSDEESESSVETNNTRPITRQSLGKIDKPISRSLRSSSKSTTIQTEIQSNVNSKPKTQVQSYVKTVKEKFVIKRKREQNISKTLSVKIKQKSLKSNQNEKPDSEEETLGMLLSKIKKKKENEEKVEGQILDNVNHIKEGKVTRSNAQNVKADLLRVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVTESDEKLNLSKTLDVSQTMKQSATLQENKVETLSIKAGSPVANSFNGECSVSGQDKKSVLNLSVKTQSSLLPSMEQTKCNHENEISSNLMPLSNLHTRKERVNMSTEQIEKWLNESSFAKEESKLEMENVSSFRYDSAKEKLKADVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRAGIHSRNVIPASPDIHNTGVKQQNAVVDKNKITIETKEIVKNKIEKMNRDTSLAEDTSDTVSKSDQNSVDGSIEKKSPTEKKIFQPRKPFLPKVKERKIVIRNANAFSPENESSVYAFESDTEVPVSTPFRRKIRDDVKRSTIIMESTATGREVSETKKSKDSESLNSKKKPSNDPTTPVRKEDAKEAQGPINVPNTAPSVNKFELPKNFASLTSVQVLPLDKLTTSWSNVNCSASIAVQVNLDETMQEQESDASQQKSTEISTQTEMNNENDDDNDGQLFYIPLQAVTRSGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPIGTVQPTTRTPPNPTAITVGQQVPSTSTTETVSTTIASMPSAETQSLALKNEVSVPNLNRQNVSTSANSSLEKLTKSPKSSRERKTSIDSTKSGKRAQMKCKQRGLDLCSSSNSTTFPGTKMENDEARVVEAPTFHPTEKDFQDPLEYIDKIRPVAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQNITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVEAEWMRKESKALQRQESSNENDEEEDEDSSDEIEECIVKVGIEYINYLLFLFLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01354407;
- 90% Identity
- -
- 80% Identity
- -