Basic Information

Insect: Tetramorium immigrans
Gene Symbol: -
Assembly: GCA_011636585.1
Location: VBVO01002517.1:14290-21590[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.27 33 5.8 0.3 1 23 124 149 124 149 0.97

2 16 2.3 2.8e+02 2.8 0.4 3 23 164 184 163 185 0.79

3 16 3.2 4e+02 2.4 3.2 1 23 191 213 191 213 0.96

4 16 0.0005 0.062 14.4 0.3 2 23 219 240 218 240 0.97

5 16 1.1 1.3e+02 3.9 9.3 2 21 526 545 525 548 0.94

6 16 0.86 1.1e+02 4.2 1.2 2 23 718 739 717 739 0.96

7 16 0.28 35 5.7 0.2 3 23 755 775 753 775 0.97

8 16 0.0087 1.1 10.4 0.2 1 23 783 805 783 805 0.98

9 16 0.15 18 6.6 1.0 2 23 903 924 902 924 0.95

10 16 0.12 15 6.9 0.7 3 23 936 956 934 956 0.96

11 16 0.0038 0.47 11.6 0.2 1 23 1033 1055 1033 1055 0.97

12 16 0.032 4 8.7 0.3 1 23 1132 1154 1132 1154 0.97

13 16 2.5e-05 0.0031 18.5 0.7 1 23 1160 1182 1160 1182 0.97

14 16 0.0048 0.59 11.3 2.6 1 23 1252 1274 1252 1274 0.97

15 16 0.00077 0.097 13.7 1.7 1 23 1280 1302 1280 1302 0.99

16 16 0.4 50 5.2 0.6 2 23 1398 1419 1397 1419 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.27	33	5.8	0.3	1	23	124	149	124	149	0.97
2	16	2.3	2.8e+02	2.8	0.4	3	23	164	184	163	185	0.79
3	16	3.2	4e+02	2.4	3.2	1	23	191	213	191	213	0.96
4	16	0.0005	0.062	14.4	0.3	2	23	219	240	218	240	0.97
5	16	1.1	1.3e+02	3.9	9.3	2	21	526	545	525	548	0.94
6	16	0.86	1.1e+02	4.2	1.2	2	23	718	739	717	739	0.96
7	16	0.28	35	5.7	0.2	3	23	755	775	753	775	0.97
8	16	0.0087	1.1	10.4	0.2	1	23	783	805	783	805	0.98
9	16	0.15	18	6.6	1.0	2	23	903	924	902	924	0.95
10	16	0.12	15	6.9	0.7	3	23	936	956	934	956	0.96
11	16	0.0038	0.47	11.6	0.2	1	23	1033	1055	1033	1055	0.97
12	16	0.032	4	8.7	0.3	1	23	1132	1154	1132	1154	0.97
13	16	2.5e-05	0.0031	18.5	0.7	1	23	1160	1182	1160	1182	0.97
14	16	0.0048	0.59	11.3	2.6	1	23	1252	1274	1252	1274	0.97
15	16	0.00077	0.097	13.7	1.7	1	23	1280	1302	1280	1302	0.99
16	16	0.4	50	5.2	0.6	2	23	1398	1419	1397	1419	0.97

Sequence Information

Coding Sequence: ATGTCGGGAAGGCTGCCCCGGTTGCGGGCACTGCGACCGCggccgcagcagcagcagaagCGTGCGAGAGCGTCGGagcccgtcgtcgtcgtcgtcgacgcgaCGACACCGAGGCCGGAAGGTAACCTTAAAGGGGCCGCCGCCGCGAGTCACGAGGTGGAGCACGATGGAGCGAAGAGGCACGACGCGAAGAAGGGCGAAGACACGGCGGCCgacgctgctgctgctgctgctGAGGAAGAgcaggaggaggaggaggaggaggaagtgATGCTGGACGGCAACGTGGACGTTGATGTCGAtatcgacgtcgacgtcgatgTCGCCGTGAATGCCGACGACGCGCTCGACGTTGAATCGCAGGCATCTTACGAGTGCAAGACGTGCGACCCGCCGAAAACGCTGTCGAGTATCAAGGCCTACTTCGAGCACCTGCGAAAGGAGCACAGATACAAGgGCACGAACGGGCACAGTCCAGTCGAAAATCGTTGCCCTGCGTGTTCGTATGTCGCATTGAACGTGAAAGATCTTGAAAATCACCAAAGAGTGCAccatttgaaaagaaaattctttcgaTGCGCAAAATGCGATTACGTGACGCACATCAGAGCGCGTTATACTAAGCATGTTAAATATCATTCTATGCCGATGATCAAGTGCGATGCTTGTGATTTTAGTTCAGCGTATAAGTGGAATCTAGAAAGACACATGCGGAATCACGGAGGTGGAGGTGCTTTCAAATGTCGTGCATGTAATTTTACCGCTGATATCCGTCAGAGCTTAACGGTGCATGAGTCATATCATCATGACCCGCCTGTGGGTCAGGTCAACCGCAAAAGTAATAACGCTTTCGAACGTAAGCCACGAAATAGTCCAAAACGTTACAATCAGGTTGGAGCCAGCGACTTTCGAGAAGCGTTAGGTAAAAACGGAAGTACAACCACGTCGGCCGCCTCCTCCGACTCGTTCGTATCAGATCACTCGTTAATTTCGATAGACGATAAGAAAAGCGCGGCCCTAGCCAGCGCGGAGTGCATCGCGTTGAAATGCGAGGAGAAAGGCTGCCAGTTTATAACAGCCTGGGATTCCGAGATGCAGCGTCATTTAGCGGAATGCCACGCGCCCGTTGTTATAACCAAGCCAAGAAAACCACTGCCGATGTTGATCCCACTGAGCCTAGCGAGCCCTAACAAGTCCAATAACACGCACGGTAGTAGCGGGCCGCCTACGACCCTGCTGAAGGTACCGCGTGTCAGAGTGAGACCCGAGCTGGCGCAAATCGCGAGAGATACGGAACTGGCTAAGATGTACGGGAACAAGGAGGCCGCGAATTCCAAGAGGAGTCTCAATACTGCGGCCGGCGTGTTTGAGAGAAAGAATGCCTCCTTCTTCGATAAACTGAAGGAGAAGctaacgacgacggcgacgtcgATTAATAACGGTGTGCCGGAGGTAGCTGTAAGTAGTGAGAACGACTTGAAATGCTGGTGTACGTTTAAAGCTAGTAGCATGGAGGAGCTAGCTTGCCACAGACAGACACACCACACCGCGCTCAGCGTGTCCGTGGGCACGACACGTTGTCCTAAGTGTAGAAGACGTTGCAAGAGTACGACTGATCTCCAAACGCATATGCAATGCTGCCATTCGCGCAACGATCCTACGCCGTCCATCGATAGTAGTTTAGAGAAAGTAACGAATCGCTCAGATGTCCGCATGACCTCGTACCGTGACGAATACTCTTTCCCGTCGCAAATGGATTGGGACGCGAATCTCAGAGGACTAAATTCTTCTGGATCTCCGGTAGAACAGCAATCGTGGAATGAGGATCATATGGAGCAGCGTAGCATAGAGGAAACGAATTCTGAGGAATCGTCGACAAAGTTGTTGATCGTGGGCAATAAAGAATACGTTTCGATGACCGGCACAGCGTCACAATCTCCCATCACGATTTTACCGTCGAGCGAGGCAAATCAAAATAGTCAGAACATAGACGTGAGTCTGCGACCTCCACCACCGCTCAAAGCAGCGGTTAGAAGTCGCGGGCAGTCTCTGTTGAAGAACAGTCCTATCACGATGCACATCACCACCCCTAGCGGTGGTGGTGCGGTCTCCATATCCCCAGCGATAGATGAGAGCAAACGCACTCAGTGGAAATGTAAACGTTGTAATTACCGTGATACCAACAAAGACAACGTGTTGTTGCATGTTAAATCTCATTACGAATCTGTTGATCACGAGTCTGTCGAAAGGAATCCATTTGGTTGTGGGGATTGTCCGTTTTCAGCATCGGATGCTGCCACTCTGTCCCTTCACAGGATGCACCATCGGCCGAACTTAGATGCTATATTTAAATGCTATCTTTGTCCATACTACGTTAGTACAAAGGCAGAACTGTTGGAGCACGCTAGGCTCCACGGGGAAGAGCTGGCAGCTATGCATCAGCAAAATATAGATCTTCAGTTTTCAAACTCCAGGAATCACCTGCAACAAATATCAATTTCCGAAGGCGgtGTTTCTCGAACGAAGGACGAATCGTCTATAGAACAAGTGATTCAAATAACGTCGCGCAACAATGTAACGGCGTCTTCAAAAGAAGTTCAGTCGCAACCGCCCCCACCGCCGTCGCTTCTTCTAGATACCCGAGCCCTTCCAGATTCTCCGCTAGTTTGGGTATCGCGGCCAGATGGCACTCTGACGAAGATGCTCAAGTGTCGCCATTGTCCGTACATATCGTCACGTCGTGCGGAAGTGCGCGATCACGAGACAATGCATGTAGACGTGCCAACTCAAGGTCCCTTGATCGCCTGCACGGATTGTAGTTTCACTTGCTCACGTCGGGAGGTAATGATCGCACATACAGAAATGCATGCGGGATCTCTCGGCACTGTTCACTGTCTCGTCGACGAGATCCGTCCTGATTCGCAACAAGTGAGCGATCTGACCACTCTGCTCGGCTTGACGCACACTCCTGTGCTTGGCAACGAGCCCGACGTGCAGGACTCGCGTCTGGTGCATTGCTGTGGCAAATGCCCGGCGCGGTTTCTGTGCGAGAAGGAGCTACGCATCCACCTGCGGTATCACACCACGGAACTAGCGTTTTCGTGCCAGTGGTGCTCGTACGCGGCGCGACAACCGGCACATCTGTTGGCTCATCAGAAGGCGCATTCGACGGAGTATCAGGAGCGCACCAAGTACCTGTTGTCCTTGTACGGTCACTCGCAGCGTTACCCACCGCCCGCGACAGCGTGCGTCGAGGCGGAGAATGAGGAAGACTGTGAGAATACGCCGAACGTCGCGTGGATCGTTGTTGAGATCAACGAGAACGCAAACAACTCGTATAACAGTGTCAGCGCTACCGCGGTGACCGTTCAAAGGACTCAGGGGAATCAGGTATTTACGTGCGCCAAGTGTCCTGCTCGTTACTTCAAACTCGATGCCTTGGAGTACCATATGACCCTTCACGGATCAAACAATCGTTTCAAGTGTAACGATTGCGATTATTCGTCGAAAACTGCACAGAATCTATTGAAACATCAAGTGGTACATCGACGGCACAATGAAACCAACGAAGCGACTGTGGAGCTATCGTCTACCGTCGCCATCACCGCCACCACTATCGATTCCGCTCCGATGTCCTCTCCCGAATCGTCGTTACAGTCGCCGCCGGATCCGCAATTTGGTATCTTCATGCGCGGCAATCCCAACTTCGTTTATCCGGGTTACCTGAGGAATGGTCGTCTGAAGGAGAAGCGCTACAAGTGTCACAAATGTCCGTCCGCTTTTGAAAAGCGCGAGCAGTATAGAGTCCATCTGACTTTGCACGGCGCGAAGCAGCGCTATCGCTGCGATACATGCGATTACTCGGTGAAATATTATGCGAATTACATACAGCATCTGAAGAAGCACCAGGCGAACGCAGAGGCACAGGCATCCCGCAGACAATTCGAGGACGATCGGATCTCGGTCGATAGCGACAGCATCATCGACGTAGTCGCATCGACGTCGTCGCGCAAGTCTTCGCGATCGTCCGCTGCTGCTAACATGCTCGCGGTATTGTCCTCCGCCAACAATGCGTCCAACGTCAATAACAATGCCGCGCTGCAACCCTCCAACCAGGATAGGCAGAGCTTACTGCTCATGCAAAAGAAGGGCATTATTTCGTCGACGGGCGAGACCGACGCGGAGACGATCCGCTGCCAGAGCTGCCCGTTCTCTACCACCGACAAGGACGTTATGGACGCGCACAAGCGTCGCCATGGTATCGAGCGAATGACGCCGCCGTGCCCGCACTGCGACTACATTCCACGGAAAGATGAGAATATCGGTGAGCACATCAAACTGCACTTCACGAGACTGTACAAGCCCGAGTCCTACCTCATCGTCGAGCTGCTGACGCTGACAATGGAGAAGATATCCGCGAACAACAAGGACAACAAGGGTGGTCAGCGGTTGAAGGAGCTATTGTTCAAGGAATGCGCCGACGGTAGATTCCTGCCACTCACCGAGTCGAttaactctctttctctaggCACCTCTTCCTCGACAATGAAGGCTGCCAAGGAAAAGGTCATCGTAGATCCGAACACAGGCGAGACCAAGCATCATCGTCTTGCCACGTAA
Protein Sequence: MSGRLPRLRALRPRPQQQQKRARASEPVVVVVDATTPRPEGNLKGAAAASHEVEHDGAKRHDAKKGEDTAADAAAAAAEEEQEEEEEEEVMLDGNVDVDVDIDVDVDVAVNADDALDVESQASYECKTCDPPKTLSSIKAYFEHLRKEHRYKGTNGHSPVENRCPACSYVALNVKDLENHQRVHHLKRKFFRCAKCDYVTHIRARYTKHVKYHSMPMIKCDACDFSSAYKWNLERHMRNHGGGGAFKCRACNFTADIRQSLTVHESYHHDPPVGQVNRKSNNAFERKPRNSPKRYNQVGASDFREALGKNGSTTTSAASSDSFVSDHSLISIDDKKSAALASAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVVITKPRKPLPMLIPLSLASPNKSNNTHGSSGPPTTLLKVPRVRVRPELAQIARDTELAKMYGNKEAANSKRSLNTAAGVFERKNASFFDKLKEKLTTTATSINNGVPEVAVSSENDLKCWCTFKASSMEELACHRQTHHTALSVSVGTTRCPKCRRRCKSTTDLQTHMQCCHSRNDPTPSIDSSLEKVTNRSDVRMTSYRDEYSFPSQMDWDANLRGLNSSGSPVEQQSWNEDHMEQRSIEETNSEESSTKLLIVGNKEYVSMTGTASQSPITILPSSEANQNSQNIDVSLRPPPPLKAAVRSRGQSLLKNSPITMHITTPSGGGAVSISPAIDESKRTQWKCKRCNYRDTNKDNVLLHVKSHYESVDHESVERNPFGCGDCPFSASDAATLSLHRMHHRPNLDAIFKCYLCPYYVSTKAELLEHARLHGEELAAMHQQNIDLQFSNSRNHLQQISISEGGVSRTKDESSIEQVIQITSRNNVTASSKEVQSQPPPPPSLLLDTRALPDSPLVWVSRPDGTLTKMLKCRHCPYISSRRAEVRDHETMHVDVPTQGPLIACTDCSFTCSRREVMIAHTEMHAGSLGTVHCLVDEIRPDSQQVSDLTTLLGLTHTPVLGNEPDVQDSRLVHCCGKCPARFLCEKELRIHLRYHTTELAFSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGHSQRYPPPATACVEAENEEDCENTPNVAWIVVEINENANNSYNSVSATAVTVQRTQGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCNDCDYSSKTAQNLLKHQVVHRRHNETNEATVELSSTVAITATTIDSAPMSSPESSLQSPPDPQFGIFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDRISVDSDSIIDVVASTSSRKSSRSSAAANMLAVLSSANNASNVNNNAALQPSNQDRQSLLLMQKKGIISSTGETDAETIRCQSCPFSTTDKDVMDAHKRRHGIERMTPPCPHCDYIPRKDENIGEHIKLHFTRLYKPESYLIVELLTLTMEKISANNKDNKGGQRLKELLFKECADGRFLPLTESINSLSLGTSSSTMKAAKEKVIVDPNTGETKHHRLAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00127818;
90% Identity: -
80% Identity: -