Basic Information

Insect: Tetramorium immigrans
Gene Symbol: salm
Assembly: GCA_011636585.1
Location: VBVO01000097.1:56286-69928[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.2e-05 0.0027 18.6 1.0 1 23 381 403 381 403 0.98

2 9 9.1e-06 0.0011 19.8 2.1 1 23 409 431 409 431 0.98

3 9 4.1 5.1e+02 2.0 3.3 3 23 796 816 795 816 0.92

4 9 3.9e-08 4.9e-06 27.3 0.6 1 23 822 844 822 844 0.97

5 9 5.5e-05 0.0069 17.4 2.6 1 23 854 876 854 876 0.98

6 9 0.011 1.4 10.1 3.2 2 23 1168 1189 1167 1189 0.97

7 9 0.028 3.5 8.8 1.0 1 14 1195 1208 1195 1209 0.92

8 9 5.3e-07 6.6e-05 23.7 2.1 3 23 1435 1455 1433 1455 0.96

9 9 1.8e-07 2.3e-05 25.2 0.9 1 23 1461 1483 1461 1483 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.2e-05	0.0027	18.6	1.0	1	23	381	403	381	403	0.98
2	9	9.1e-06	0.0011	19.8	2.1	1	23	409	431	409	431	0.98
3	9	4.1	5.1e+02	2.0	3.3	3	23	796	816	795	816	0.92
4	9	3.9e-08	4.9e-06	27.3	0.6	1	23	822	844	822	844	0.97
5	9	5.5e-05	0.0069	17.4	2.6	1	23	854	876	854	876	0.98
6	9	0.011	1.4	10.1	3.2	2	23	1168	1189	1167	1189	0.97
7	9	0.028	3.5	8.8	1.0	1	14	1195	1208	1195	1209	0.92
8	9	5.3e-07	6.6e-05	23.7	2.1	3	23	1435	1455	1433	1455	0.96
9	9	1.8e-07	2.3e-05	25.2	0.9	1	23	1461	1483	1461	1483	0.98

Sequence Information

Coding Sequence: ATGACACAAGATAAAGACAATAGTTCCAGTGGAAGCCAAAAGTGTATGAAATGGTATATAACGGATCCATTGAAGCTGTGCACTCGTCACGAGTTGAGAAAGAACATCCACATGTTACGTCGACGAATATCTAGAGAAGAAAATGACTTTACATCGGACGGCGAAGAGAGCGGTGGTGGAGGAGGAGGTGGCGAGGAAGCCGTGGATCTCACAGCGACGAGATCTCATCAGGGCGACGATGATCCTATGGAAGAGGATGAGGAAGAAGGTATCGACGAGCAAGACGAGCAGGATGAGGACGAGGAGGGCTCGCGCAAACAGATTCATCATCGGCAAGATGCGGAGAACAATAATAACTTTGTGGAAAGCGGTTTACCTACCGCAATATTTCCGCCCGCTGGAACTAGTCACGTCACCCTCGAGGCCCTTCAGAATACAAAAGTGGCGGTCGCCCAATTCGCTGCCACTGCCCTCACCGGGGCGGACAGCGAAGCGGCACTACAGGACTTGGCGTTTCTGGAGAACACGCTGTGCACCCTTCAGAATCAACAAGTATTGCAATTACAGCTGATTCGGCAGCTACAGCAGCAATTGCTGATCACTCACGGGCAATCGGTAATGCAATCGTCGGCAACGGAGCCAACTGACAGCAAGGAGGCCTCGTCGTCTCCCATTATTCATCCGAAACCATTGTCGAGTCTCGCGTCACCTCCTTCTTCTCGTCCACCGAGTCATCATCAGCAAACGTCACCGGCGCCGCTGACCCCGAATCTACTTCAGGAACGACCGACGTCGACGAGCAGCGCCTCACCTTTGAATCTACCCCTGTCTTCGTCCAGCGCGACGTCAACCGTCAGCACGACCACCAGCAGCCAAATGCCGTTGCCGCATCAAATGCCACCGCTTTGCTCGATAAGCGCCTCCCTTGCTTCGTCGATCATAACGAATACCGATCCGCCGCCGCTCCACGAGCCAAACACTCTGGATATTCTTCAAAAGCGTACTCAGGAGGTATTGGATAACGCGAGTCAAGGACTGGCCAACAATTTGGCCGACGAGCTCGCGTTTAGAGGCAAGGGCTCGCGACTGTCTCCTTACGATTCGAAATCGAGCGGTGGTCGCGGCGAGCCCTTCTTCAAGCATCGATGTCGCTTCTGCGGCAAAGTCTTCGGTAGCGACTCGGCGCTACAAATCCACATACGATCCCACACAGGTGAGCGACCCTTTAAGTGCAACGTATGTGGAAGTCGATTCACGACCAAGGGCAACCTGAAGGTCCACTTCCAAAGGCACACGGCCAAATTTCCACACGTTAAGATGAACCCGAATCCTGTTCCAGAACATTTAGATAAATACCACCCGCCCCTCTTGCAGCAGATCGCTAGCGCGCAGAGACCGATGCCGtccccgccgccgccgccaccaccatcCTCTCATCACCCCTCGTTTCATCCGGCGACAACGCACGGTTTCCTCCCGCCACAACCGCCCATACCTTTGAGCCTCACCTTACCCAATATGACACCTCTTTACCGATCCCCAGTTATTAATCATCGGGACGATCAAGATGTGCCGGAGAATCTTAGTAAACCCATAACCACCGCTCCGCAGACATCTCCCACCTCTCCCGTTGCCATCTTGAATTCTCGTCATTCCTTTCACGACAATCTTCATCAACAACATCAAAAGCAGCAGCTTGAGCAAAGAGAGGAGATAAAACTCGAACAGAGATCGCCCGGGCAGGAGCCATATCAGCAGCGACCGATGAGCCGGGAAGGCGCCGAGCGAATAACACCGAAGAGAGAACCCGAGGAGGCGGAAGAGGTCGCGGAGGAAGAGAGCGAAGATTTCGAAGAGACCACGAGACGATACCTCAATTCACCCCAATCCGCGAATCCACCGTCCCAGCCGCAAACGTACGAGGATTGCAGTATGGACAGCAAGATTAGCGGACGTTTAGAGGGCGACGGGGAAATGGAGGTGGACGAGGAAATAGAGGAGCAACCGGAAAACCTTTCGGGCAGAGGTACGATCAGTCGTTTGCCTCAACAAATGGTCACGTACCCGGGAGCATCGCCGGCTAGCAGTAGCGCCAGTAGCGGTAGCCTGCAGACATCTTTCGCTGGAATCCTGTTCCCAGGTCCGCCAGCTCATCACCAAATTCCTCATCTTCCTGTTTCCACGCAGGCAGGATCCACCACGACGTCCGTGAGTGACATGATCGATCCATCCAAGGATCCGGCGATCTATTCGACTTTACTACCGCGGCCTGGCAGCAATGACAATTCCTGGGAGAGCTTGATCGAAATAACGAAAACCTCGGAGACGTCGAAGCTGCAGCAACTAGTCGACAATATCGAGCACAAACTGAGCGATCCCAATCAATGCATCGTTTGCCACAGAGTGCTCTCATGCAAGAGCGCGTTGCTGATGCATTATCGGACTCACACCGGCGAGCGTCCTTTCAAGTGTAAAATTTGCGGTCGCGCCTTCACGACGAAGGGCAATCTGAAAACCCACATGGGAGTGCACAGAGCTAAACCGCCACTGAGAGTGTTGCATCAGTGTCCCGTGTGTCACAAGAAATTCACGAACGCTCTCGTATTGCAGCAGCACATACGCCTTCACACCGGCGAACCCACCGATCTCAGCCCGGAGCAGATCCAAGCTGCGGAAGTGAACGAGTTCCCGCCCGGCTACCATCCGCTGGCGTCTTTCCTCCCGCAAGGATTCCCGCCGATACATCCGACCGGCGCAGGCTTCTCCTTAGGATTCCCTCCATCCAGGCAAACGGCCATCGAGCAACAATCACAGGAAAGCGATGCCGAAGCGAAAGAAGACTCTCAGCACCGAGCAAGATTTATGGAGGAGCACGAGGAGATGGAAGATCAGGAAGACGAGGATCAAGATCACCGAGAGGATGACGAGAGGTGCGAGTTGAATCGCGACAGGCGTAGCATCGATGTCGAAGAGGAGCAGGACCACGAGAGTCAAGACACGACCGAGCACAAAGACATGACGCTTCCGATATTTTCGACCTCATTGGCGGCGCTCGAGAATCAAGTGAGGACCATCACGACGACGGCCACGAGTACGAATGTGGCTAGATCACCGTCCTTTCATCGATACAACGGCAGCGAGAAGAGCACTAGCCCGCCGACCTCCGGAGCCCCGCTCGACCTAACGCCCCGCGCTTCGTCCACGCCAGCGTCGGTGGCCTCGGCGTCGCCGACACCGCCGCCCCAGGCCGCGCCGCATCATCCACCGAATCCCTTCGGCATGTTCGCGGGCCTACTGCAAGCAGCCTCGTCCGCTCCTACCACCAGCACGATAGGCACGTCAAATATAAACAGCGTCACTTCGATGAGTGCCGTCAACCCGGGAAGCGGCCCCGGTGGCGGACCACTTGCCTCGCTGACCACTTCGGCGGTACTAGCCGCATCGTCGACTTACAATCCGCTCGGCCTAGCTGTCGGAGGCCCAGCAGTACGTGGCAACACCACATGTAAATTCTGCTACAAGACATTCGCGTGCCAATCTGCATTGGAGATACATTACCGGAGTCATACGAAGGAGCGACCTTTCAAATGCACCATATGCGATCGAGGTTTTTCCACGAAgAACGATGATTCCGGTCAGCAAGTATGTTCCTGCGCGGACCAACCCTTCGCCGCGAAGGGTCCGATCCTCTCACAACCCAATCCCCAATATCGCTCGTACCCGGCAAGATCGGCTGCCGGAAATAGTGAGAAACCGAAACGCAGGCGGCGGCGGCCTGAGGAACGGAAGAACCGGGGGCGGACAGGAACAGGAGGGGGGCGAAGGCTGACGTCTGTTTATCCTGCCGTCCGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTACCCTCGGACCACGTCTTCCTGGGTAATATGAAGCAGCATATGTTGACTCACAAGATTCGCGATATGCCGCCACATCTGTTCAGCGATCCCAAGCatcaacagcaacagcagcagcagcagcaaccaccgccaccgccgccgcagcaacaacagcagcagcagcagcaaccaCAGCAACCACAGCAGCAGGATCAGGAGACTTCCAGAAGTCCAATGTGCGTCGACGATTCAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCACCTCGACCACCCCCGCCGATGCCACCAACATCCTCCATTGAGTCCACGATACCAGTAAAGAGATCGCCAGAGGGAGATCTACCGGCACCGAAGAGACCAGCCAGCGTGCAGAGCAAGCATTTGTGCCAGATTTGCAATAAGAATTTCTCCTCGTCTTCGGCGCTCCAGATTCATATGAGAACTCACACTGGCGACAAGCCGTTCCGATGCACCGTCTGCCAGAAGGCGTTCACCACCAAAGGCAACCTTAAGGTGCATATGGGTACTCACATGTTCACCAACGGAACGTCACGTCGAGGCCGACGGATGTCGTTGGATATACCACCTCTGCCAATCACGCCCAAGGACTCGGAGTTTCTGCAACGACGACCGGACCTCTTTTACCCGTATCTTCCCGCGCCATTCCTTAACGGCGTCCAGCAGAAGCTGAACGAGATTTCGGTGATTCAAAGTAGCAACGGGTTACCTCCCCATTCCTTGAGCGCGGGCAAGTACGCGGCAAGCCTGTTCGGCTCGGTGTACGGTGCCGGCGGGGGTGGGTTCTCTCTGGATAAACAGCCGATCGGGCCGACCAGTAACGGGCCCTTGGACGGCAAGTCCGCGATACCCTCGGGATCCATGCTCTTCCAGACACCGTCGCCCGCGCACTCGCCCGGCGCGTCGTCCAACGGCGGTAATCAGACATCCGCCAGCGTGTCCTGGACCGGCGACACTCTTCAGCATCACTTCGACCGGGAAACACCGAGTAGAACCGAGAACGACGCGACACCGCCTACGGCACGGCTACCACCGCCACCGGCGAGGGGAGAGGGATTGGCCGCGTGA
Protein Sequence: MTQDKDNSSSGSQKCMKWYITDPLKLCTRHELRKNIHMLRRRISREENDFTSDGEESGGGGGGGEEAVDLTATRSHQGDDDPMEEDEEEGIDEQDEQDEDEEGSRKQIHHRQDAENNNNFVESGLPTAIFPPAGTSHVTLEALQNTKVAVAQFAATALTGADSEAALQDLAFLENTLCTLQNQQVLQLQLIRQLQQQLLITHGQSVMQSSATEPTDSKEASSSPIIHPKPLSSLASPPSSRPPSHHQQTSPAPLTPNLLQERPTSTSSASPLNLPLSSSSATSTVSTTTSSQMPLPHQMPPLCSISASLASSIITNTDPPPLHEPNTLDILQKRTQEVLDNASQGLANNLADELAFRGKGSRLSPYDSKSSGGRGEPFFKHRCRFCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASAQRPMPSPPPPPPPSSHHPSFHPATTHGFLPPQPPIPLSLTLPNMTPLYRSPVINHRDDQDVPENLSKPITTAPQTSPTSPVAILNSRHSFHDNLHQQHQKQQLEQREEIKLEQRSPGQEPYQQRPMSREGAERITPKREPEEAEEVAEEESEDFEETTRRYLNSPQSANPPSQPQTYEDCSMDSKISGRLEGDGEMEVDEEIEEQPENLSGRGTISRLPQQMVTYPGASPASSSASSGSLQTSFAGILFPGPPAHHQIPHLPVSTQAGSTTTSVSDMIDPSKDPAIYSTLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLSDPNQCIVCHRVLSCKSALLMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYHPLASFLPQGFPPIHPTGAGFSLGFPPSRQTAIEQQSQESDAEAKEDSQHRARFMEEHEEMEDQEDEDQDHREDDERCELNRDRRSIDVEEEQDHESQDTTEHKDMTLPIFSTSLAALENQVRTITTTATSTNVARSPSFHRYNGSEKSTSPPTSGAPLDLTPRASSTPASVASASPTPPPQAAPHHPPNPFGMFAGLLQAASSAPTTSTIGTSNINSVTSMSAVNPGSGPGGGPLASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCKFCYKTFACQSALEIHYRSHTKERPFKCTICDRGFSTKNDDSGQQVCSCADQPFAAKGPILSQPNPQYRSYPARSAAGNSEKPKRRRRRPEERKNRGRTGTGGGRRLTSVYPAVRLPPLMPPALGLLPSDHVFLGNMKQHMLTHKIRDMPPHLFSDPKHQQQQQQQQQPPPPPPQQQQQQQQQPQQPQQQDQETSRSPMCVDDSSXXXXXXXXXXXXXXXXXPPPRPPPPMPPTSSIESTIPVKRSPEGDLPAPKRPASVQSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMFTNGTSRRGRRMSLDIPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSSNGLPPHSLSAGKYAASLFGSVYGAGGGGFSLDKQPIGPTSNGPLDGKSAIPSGSMLFQTPSPAHSPGASSNGGNQTSASVSWTGDTLQHHFDRETPSRTENDATPPTARLPPPPARGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00417805;
90% Identity: iTF_01421750;
80% Identity: -