Timm000954.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetramorium immigrans
Gene Symbol
ZBTB41
Assembly
GCA_011636585.1
Location
VBVO01003756.1:1-5617[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.0033 0.42 11.8 0.4 1 23 88 110 88 110 0.93
2 29 6.5e-07 8.1e-05 23.4 0.8 1 23 116 138 116 138 0.99
3 29 1.1e-06 0.00013 22.7 0.5 1 23 144 166 144 166 0.98
4 29 0.001 0.13 13.3 2.3 3 23 174 195 173 195 0.96
5 29 5.6e-05 0.007 17.3 3.0 1 23 200 222 200 222 0.97
6 29 3.4e-05 0.0042 18.0 1.2 1 23 231 253 231 253 0.98
7 29 4e-06 0.00049 21.0 1.0 1 23 259 281 259 281 0.97
8 29 5.9e-05 0.0074 17.3 1.3 2 23 288 309 287 309 0.96
9 29 4.7e-06 0.00059 20.7 3.3 1 23 315 337 315 337 0.98
10 29 0.013 1.6 9.9 0.2 1 23 413 435 413 435 0.96
11 29 3e-05 0.0037 18.2 0.4 2 23 442 463 442 463 0.97
12 29 1.2e-05 0.0015 19.5 5.8 1 23 494 516 494 516 0.95
13 29 0.00024 0.03 15.3 3.6 2 23 522 543 521 543 0.97
14 29 0.0016 0.2 12.7 0.1 1 23 548 570 548 570 0.98
15 29 6.1e-06 0.00077 20.4 2.1 1 23 578 600 578 600 0.98
16 29 0.52 65 4.9 3.0 1 23 606 629 606 629 0.94
17 29 0.0003 0.038 15.0 0.3 3 23 642 662 640 662 0.96
18 29 1.7e-06 0.00021 22.1 1.8 1 23 668 690 668 690 0.96
19 29 4.5e-08 5.6e-06 27.1 0.2 1 23 696 718 696 718 0.98
20 29 6.9e-07 8.6e-05 23.3 1.0 1 23 724 746 724 746 0.98
21 29 0.00078 0.098 13.7 1.7 1 21 752 772 752 773 0.96
22 29 0.03 3.8 8.7 3.0 1 23 861 883 861 883 0.96
23 29 3.7e-07 4.6e-05 24.2 1.4 1 23 889 911 889 911 0.99
24 29 0.0029 0.36 11.9 1.0 1 23 918 941 918 941 0.96
25 29 4.5e-05 0.0056 17.6 3.2 1 23 947 969 947 969 0.98
26 29 0.014 1.7 9.8 0.1 1 23 975 998 975 998 0.97
27 29 9.1e-05 0.011 16.7 1.8 1 23 1008 1030 1008 1030 0.97
28 29 0.17 21 6.4 2.0 1 23 1034 1057 1034 1057 0.90
29 29 0.00019 0.023 15.7 3.0 1 19 1063 1081 1063 1083 0.94

Sequence Information

Coding Sequence
aaTGAAAAACCAGCAGAGACGTGTGTAAAAAATGAACTATCTATAGATGAATGTACGGATTCTACGTTGGTTTCAATTTTcgttaaagaagaagaaaatgtaaagCAGGAAGATTgcaatgtacaatataaagcTATAAGTTTGAGACGTAAATCTTCTGAGAATCCCTTGACGCAAAAAGAACCTGAAAAAACTACAAACGGAGAAATTACTCGTCAGAATTATTCAAGCCTGAAGAAACAATCCACCAGTCAAACGTTTTACGAATGTAGCATATGTACGAAACTTTTTAGATCAAAGAACTTGTTTGAAGGTCATTTGGTAGCGCATAGTGATGCTCGACCCTACCAATGCGACGTCTGCGGCAAATCTTTCAAGAGGACCAATACCTTAGCGGTACACAAGCGAATCCACACTCATGAGAAGAACTTTATTTGTGACGTATGTGGTCGCGCGTTTGTGCAGGCCTCTCAGTTGGCTACTCACCATAGACGTCACTTCGAGAAGTACACGAGGCATTGCGAGATCTGCAATAAGGGCTTTTTCACGAACGCCGAGCTTCATGGACACATGAACGTGAAGCACGGCGCCAAAGAACACGTGTGTACCGCCTGCAACAAGTCGTTCCCCAACAATCATACTTTGGTACGTCACTTGAAGATCCATGATCCGAACTTCAAGCCAGTAAAACACCAGTGTGAGTTCTGCGGCAAGATATTCGCCTACAAGAATTCATTGGTAGTCCACGTCAAATCGCACACCGGCGAGAACAAATACGACTGTCATCTGTGCGGCAAATCCGTCTCGTCTAAGGGATCTCTTCAAGATCATCTGCGTCTTCATGGCGGGGAGAAATCCTTGATCTGCGACATTTGCGGCAAGGCTTTTCATAAGAGAACGACATTGGTTGTGCATAAAAGGACCCATACCGGCGAGAAGCCATACTCGTGTGATACTTGCGGAAAATCTTTCACGCAACATTCGACCCTCGTTATACATAAACGATACCACACTGGCCAGAGACCaTACAACCAGCTACCGTTTTCTGAAGACTATTACCCGATGTTCTCTAAACTTGAACTGGTGAAGAAGAACAACGAACCCGCCAAGTTCTCAACGAAGTGTCCAGGAGCAGCGGACGCGACTGATGAGACAACAGCTTCAATAAATCCTGAACAAAGCATCATAAAGCAGGAAGTAAATGATGAGGATGACGAGGAAGATCTTCCTTTAGCgtatcaatgtaaattatgcaGCGTTCTCTTTGCTTCGCAATCCTTGTTGGACACTCATGAGCTCGAGCATAAAGGTAAGCGGAAGAATACGTGTGCCCAATGTGGCCGGGTCTTCAGAACCGGTATCCTTCTCCGCAAGCATATGAAGGTACATACGGTACGTAAAAGCAGTCGCAACTCTTCAGGAGTAGCCGGCCGTACCACATCATTGAAGAAGGTGAAGAAGGAGAAGCCCGAGTTGGAGTTTCTCTGCAAGACTTGTAACAAGGTTTTTCGGCACAAGAGCAATTACCAGAAGCATTTGTTGCGCCACACAGTAGGTGATCTTCCCTGCAAGCATTGTCCCAAGAAATTTCGATTGTTTCGCGATTTAACGAGGCACGAGAAGACCCATTTCCTACCGAGTTATGTGTGTAAGGAGTGCGATTATGAGACCACCGTTTTGGCAGCTTTGAGCATCCACATGACGCGACATATGGACAAGGCGGATCTGCCGTTTAAGTGCAATGAATGCGACAAGCGTTTCCGGAAGAAACTCGATCTTCAGGAGCATTACAATATTCACTCGGGCGAGAAGCCGTTTGTCTGTCAACTCTGCAACAACGCTTTCTACCTGAGACGACAGCTCTCCGCACACTGTAGACGTACGCATCCTGAATTGAAGGCCAACAAAGTGACCAGCACCGCTTGCGACATTTGCGGCCGTGTACTTGCCACGAAGAGGTCACTCTTTCGACACAAGGAAAGTCACAATCCGACGAAGCTGTATCTCTGTGATTATTGCGGAAAGAGTCTTAGCAGTGCTGAACATTTGAAGAAGCACCGACGGATCCACACCGGGGAAAAACCTTACGTTTGCGACATTTGCGGAAAGGGTTTCACCGACTCCGAAAATCTGAGAATGCACAGGCGAGTGCACACGGGGGAAAAGCCGTACAAGTGCGACCAGTGCCCGAAAGCGTTCTCGCAGAGGTCGACGTTGACGATTCACAAACGCGGACATACTGGGGAACGGCCTTACGTCTGCCAGATATGCCACCGTGGATTCTCTTGCCAGGGCAACTTGACAGCCCATCAGAAGTCTACAATTTTTGAAGTCGAAGAGTTGATAGGACAAAATATCAAGACTGAGCGTAGCGAAGAAGCATCCAAGGGATACAGTCATACGTGGTTTGAGATAGATTCAAATTCAACGATCGAAAACTTGATAATCAAagaggaaataattataaacgaaaCAAACGAAACGTTGAAGGAGCCTTTTAACGCAACACATGACGAGAACTTCAAAAATACTTTGATTAATatcgaagaaagagaaaaaaaaagaagtaatcgTGGGAGATACAAATGTTCCACATGCCATATGAGCTTCTCTCTATACGGAAGGTATAAAGACCACATAGGGAGCCACAGCAATAAACGTCCGTACAAGTGTACCGTTTGTGAGAAAAGTTTTAAACGTAAATCGGCGGTGAACCAACATTTGCGGATCCACAATCCATCTGATAACACACATATTTGTGACGTGTGTggttttatttcgaaaaatagagCTTCATTTAAGATCCACGTTCGACGATTGCATATGCGCGACCTTCCATACCGTTGTGAGCACTGCAGCAAGCGATTCATCTCAAAATATGCTCTCGAGGATCACAGGACAAGCCACCTAGGTGACAAAACCTTTGTTTGTGATAACTGCGGCAATGCTTACTTGCAGAAAACACAACTGATCGCACACGTCAACCGCATGCACAGCGAGAGACAAAAGGCGCCGAAGCAGCATCAATGCGGTTTTTGCAACAAAAGCTTTGTCTCGGAGCTTAATCTTCGTAATCACGCGAGATTGCACTCGCAGGTGTTCCTATGCACTCAATGCGGCGAAAAGTTTATGACAGATTGTGCACTGAAGTTACATGAATATAAGTTACACACGGACACGAAACGATACCTATGCGATTTCTGCGGACAAACTTTCACACGGCGTAGCAGCTTGACGAGACACTGCCGTGGGCGATGTAAAAAATCATCCGACGCCGCCACGAATACTGCTCAGTAA
Protein Sequence
NEKPAETCVKNELSIDECTDSTLVSIFVKEEENVKQEDCNVQYKAISLRRKSSENPLTQKEPEKTTNGEITRQNYSSLKKQSTSQTFYECSICTKLFRSKNLFEGHLVAHSDARPYQCDVCGKSFKRTNTLAVHKRIHTHEKNFICDVCGRAFVQASQLATHHRRHFEKYTRHCEICNKGFFTNAELHGHMNVKHGAKEHVCTACNKSFPNNHTLVRHLKIHDPNFKPVKHQCEFCGKIFAYKNSLVVHVKSHTGENKYDCHLCGKSVSSKGSLQDHLRLHGGEKSLICDICGKAFHKRTTLVVHKRTHTGEKPYSCDTCGKSFTQHSTLVIHKRYHTGQRPYNQLPFSEDYYPMFSKLELVKKNNEPAKFSTKCPGAADATDETTASINPEQSIIKQEVNDEDDEEDLPLAYQCKLCSVLFASQSLLDTHELEHKGKRKNTCAQCGRVFRTGILLRKHMKVHTVRKSSRNSSGVAGRTTSLKKVKKEKPELEFLCKTCNKVFRHKSNYQKHLLRHTVGDLPCKHCPKKFRLFRDLTRHEKTHFLPSYVCKECDYETTVLAALSIHMTRHMDKADLPFKCNECDKRFRKKLDLQEHYNIHSGEKPFVCQLCNNAFYLRRQLSAHCRRTHPELKANKVTSTACDICGRVLATKRSLFRHKESHNPTKLYLCDYCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHKRGHTGERPYVCQICHRGFSCQGNLTAHQKSTIFEVEELIGQNIKTERSEEASKGYSHTWFEIDSNSTIENLIIKEEIIINETNETLKEPFNATHDENFKNTLINIEEREKKRSNRGRYKCSTCHMSFSLYGRYKDHIGSHSNKRPYKCTVCEKSFKRKSAVNQHLRIHNPSDNTHICDVCGFISKNRASFKIHVRRLHMRDLPYRCEHCSKRFISKYALEDHRTSHLGDKTFVCDNCGNAYLQKTQLIAHVNRMHSERQKAPKQHQCGFCNKSFVSELNLRNHARLHSQVFLCTQCGEKFMTDCALKLHEYKLHTDTKRYLCDFCGQTFTRRSSLTRHCRGRCKKSSDAATNTAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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