Timm009197.1
Basic Information
- Insect
- Tetramorium immigrans
- Gene Symbol
- ARID5B
- Assembly
- GCA_011636585.1
- Location
- VBVO01003809.1:2319-7124[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-23 4.2e-20 72.5 0.0 1 89 84 170 84 170 0.95 2 2 3.6 1.4e+04 -2.9 0.0 6 32 519 546 516 548 0.70
Sequence Information
- Coding Sequence
- ATGGCCATTGTGATGAAAATTCGGAATAATAAAGTGGTTTATCTAAATATACCCGCACCAAAACTAAAGGGCAGACCGAGAAGAAAACGTAAAAAGCGCAGCGCTTCGCCGGGTGAATCCTCGAACGAGAGCGAAGCCTCAGTGGCGTCGACGTCGAAGAGCACGTCGGCGATCACCAGCCTGGTGATACCCACAGTCGGGAGGCCGCCCTCGTCCGGGGTACGGCGGAGCGAGAGGAAAACCAGCGCGGAAGAAAAGAAGTTTATCACCGACGTGCAGAGCTTTATGAACTCTCGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGACCTGTTCCTGTTCTACACGAAAGTGCAAATGCTTGGTGGTTACGATACCGTCAGTGCTGGTCGCCTTTGGAAGACCATCTACGACGACATCGGTGGCAATACAGGCAACACTAGTGCAGCGACTATTACACGTAGACACTATGAAAGATTATTATTACCTTATGAAAGATATCAGCGAGGCGAAGACACAAAAGTGAAATTGAATCACGGACGACGGACCAAGAGTATGTCCGAGGATTTAGATATCAAGGAGGAAGCGAACGATATATACATGTCGGAGACTCCTCCGCCTATAGATGCAATTCCTGCAACCACAACATCGCCCTTACAACCAATAATGTCAGCAACAACGACTTTACTCTCGAGTGAGAAACCCAAAGCTGAAACCGGCAAGACATCCTCGTTACGTAGCGTGCGAGTGAAGCCGGAACGCCTCAAGTCcttaaatacaataatcgCCAATAATGCGACACCTTCCAGCCAGCAAGCTAGCCAACTGCCAAGTCCACCGCCATCCTCCAATACGTCTATCTCAACGCCCAATAGCACACCCTCCACAACGCCAACGAATGGTACCAGTAACAATCAGAGTGTCTTGGAGAGACAGCTCAACAGTCCTTTGATATCCCAACAAGTTCCACCATCGTGTTCGCCAGGCTTGCCCGTGACTAGTGTAGCAACAAATGCGTCGACAGTTGTCACTCTAACGCCTCCGCCTGAAAAGGATATGAAGGAGATCAAGTTAGATCCCAAGCAGACGACTCTACTGGCGCAGGGCAAGGAAAATATACCACTGTTTGGCGGGGAGAAATTTGCGGAAAAGACGATAGTCCCGCCGGTCTCCAGATCGCCCGAAGTGATAGACCTTGAAAACGAGAGCGACACGAGTCGAGACAAGATAATCATTCCCAGCTTCAAGAAACGTAAACTCGAGATCTTGCGCGAAGGCGGTCTCGAAGTCACCGCCGTTGATCTGGACGCTCGACCGAGCGTGATTCAGAGCAATGTCGCCATGTCGCCGCAACAACAACCTCTGCCGGCTACAATGAAGTCCACTGAGGAGAAACAACCGTCGATCTCGCCGTATCCACTTCCAGTCACGCCCAATTCCATTCCTAAGTTGATATCGGTCACCGTGACGCCCGATATAGGACACATGTTACCGTCGCCGCATCAGGATCATCAAAATCATCAATCACGAATATCAGCGATTAAACAACTACCGGCTCATCACAACAATAACAACATTAGCATGATGAACAACAATAATGTGGCGAACAGCCGAGTGATAAATCTCGGTAATTCGAACAATGCTGCATTGTTGCAATTGTATGCAAACGCGAACGTCGTACCACAATCTGCGCAGCATCCAAACCATCGTTTTGTTCCACCAAATATTCCAAACGGTAGGTTATTACCGCCAAAGGTGACACAGTCAAGATCGATATTTGTGCATAACGAAAGGACGGTTTACGGAAATCCCAAGGATATTCTTATCTCTCCACCAAAATATCGCTCGTCGCATTTGCatcaacagcagcaacaacgCTTGCAGCATCCGCAAATGAGTTCTAGCAACGACATCGGACAAGGAGGTGTTCTCGATTTGACACAAAAGTCTATCGAGAAACCTACGTTCCCTAGGCCCAGTCTAGAAATAGTCAAAGTACCTGTAGTACAGAGGCCTAATCCGTTAAATCTAGATGTGCGAAATTCACCCGCCAAGGACAAATCGTCGGACAGACCTGTCGCCGACTGTCCAAGGCGAATACCCTTCCCTGCCTACCAAAATGTAATCGACAGTCGAACTATCGCGTCGAATAACCTCGAGATTACATTAGTGAATCCCAAGCACAAAAACAATCACCTCCTCATGTCTCACGTCCAAATACCAAGTCCACCTAATAAAAGCAATGCGATAGGAACGATAAATAGTGCGCAAAGGAGGCTGCTACAACCGCAGCAACAAGTGAATGGAAAGTATATGGTGAGAAGCGAGCCGGTTTCGCCATACACACCGAGGAAGCCAAGTCATCCTATCATACCGAACGTACCCAATTTGAATCATCTGAATCACAGTGGAAATTCGTTTCCTAGAATGCAGGCAACGACGttacagcaacagcagcaacagcaacagcaaatGAGTATTGACAGGAGGAAAGCGGCTGCGGAGGCCGGCAGGGATCATCAGCATCGTAGGATCAGCGAGGGCGAGAAATCATCTTTGGCAgcgcaacagcagcagcagcagcagcaacaacatcAGGAAATGAGGCACAGCGAGGCCGGGCGACGACACAGTTTACCCAGCATACCATCGGGTTTTGTGCCGACAGTACCACAAAACAATTCTACCGCCTTTCCATTGTCGCAACTGCCAAACGCATCCGGCAAGTTCCTACCAATCCTGGATCCCATGTATTACTCTACGTTCTATAACGGTCTGTTCCCACCGCCAATTCCGCCCACGGCCGCCGCAGCTGCTGCCGCCGCGTCGTCATTTTTACCGCCGGAGTTTAACGCGTATTACAAGGAATTACTCGCTTCCTCGCAACCAAGACTGACGGGGATGATAGGGCAGCCGCCGCATCAGCAGCCGGCCGTCCCGACGTCTAAGTAG
- Protein Sequence
- MAIVMKIRNNKVVYLNIPAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTSAITSLVIPTVGRPPSSGVRRSERKTSAEEKKFITDVQSFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDTVSAGRLWKTIYDDIGGNTGNTSAATITRRHYERLLLPYERYQRGEDTKVKLNHGRRTKSMSEDLDIKEEANDIYMSETPPPIDAIPATTTSPLQPIMSATTTLLSSEKPKAETGKTSSLRSVRVKPERLKSLNTIIANNATPSSQQASQLPSPPPSSNTSISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPSCSPGLPVTSVATNASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGGEKFAEKTIVPPVSRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQSNVAMSPQQQPLPATMKSTEEKQPSISPYPLPVTPNSIPKLISVTVTPDIGHMLPSPHQDHQNHQSRISAIKQLPAHHNNNNISMMNNNNVANSRVINLGNSNNAALLQLYANANVVPQSAQHPNHRFVPPNIPNGRLLPPKVTQSRSIFVHNERTVYGNPKDILISPPKYRSSHLHQQQQQRLQHPQMSSSNDIGQGGVLDLTQKSIEKPTFPRPSLEIVKVPVVQRPNPLNLDVRNSPAKDKSSDRPVADCPRRIPFPAYQNVIDSRTIASNNLEITLVNPKHKNNHLLMSHVQIPSPPNKSNAIGTINSAQRRLLQPQQQVNGKYMVRSEPVSPYTPRKPSHPIIPNVPNLNHLNHSGNSFPRMQATTLQQQQQQQQQMSIDRRKAAAEAGRDHQHRRISEGEKSSLAAQQQQQQQQQHQEMRHSEAGRRHSLPSIPSGFVPTVPQNNSTAFPLSQLPNASGKFLPILDPMYYSTFYNGLFPPPIPPTAAAAAAAASSFLPPEFNAYYKELLASSQPRLTGMIGQPPHQQPAVPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254583;
- 90% Identity
- iTF_00126486;
- 80% Identity
- -