Tbic004485.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetramorium bicarinatum
Gene Symbol
gata4
Assembly
GCA_011636605.1
Location
VBVP01001504.1:1-37295[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.6e-18 3.3e-14 52.7 3.2 1 34 575 607 575 609 0.97
2 2 1.7e-18 6.4e-15 55.0 4.1 1 35 629 662 629 663 0.98

Sequence Information

Coding Sequence
ATGGAAAATGGCGCCATGGTTGAGCCAACCGGTGCCGAAGCAGTCGCTATTGCGGTCGCCGCCGTTGCCGCTGGTGCCGACAATCATGCCAATGAGGATTCCAATACCACTTATACCCTTCATGAGCTCGACTATCATCCCACACACATAATCCAGGAGAGTTTTGGGGGCGGTGATATGAGGGaggagcagcagcagcaacaggtTTCCCAACCGCACCACCAACAGCATGACACACACCATCACCATCgtcaacaacagcagcagcaacagcagcagcagcaacagcagcagcagcagcagcagcagccgccgccgccgccgccgccgccaccaccgccgctgcCGTCGTCGCAACACCATCACCAACAGACTCAACAGTATGTTCAGCTTGGGGCGAGAGAGGTCCCGGTTCCCGAGGGAGGGGATAGCACGGAGGCCTCCATCGCGCCGGAGGGACGCCGTGCCGGCAGTCACATGCCTCACTCCACGATGCATCGTTACGGTATCGAGACGCTCTCACCAACCACGACGGACCATCATCACCATCAACAACAGCaacatcatcatcatcatcatttaTCTGAGGTGCATCAACATACCGCTTTATCCTCTGCTCATCGTCATCTGGAAGATTCGCAGCAGCATCATCAAGAAACTGACGAAGACGTGGATCGAGGGGTGAGCAGCATCACCGCAGCCATGAGAGGTGCACGGGGTGATTATCTAGGTGTACTCTTTCCGACTCTCACTTCGTCGAGCAGCACGTCCAGCAACGGTGGTAGcagtcatcatcatcatcatacGTCGCACCACTTGGAGGACGTATTGTCCGAAGAGTCTTATTTGCAACATCAAATCCGTACTGGCGGAGCCCCCCCGACCGGCGGTGGTTCTCCATCGGTGAGAACCGTCGGCGGCTCGCCGACTTCTAGTCATAGCCCGCACGACGATCAGGCTCTCTCATCGCCACATCGCCAAGCCCAAGAGAGTTATAGCCCCACTGAACAGGGCAGATTGCAATCTTTTACGCATCTTACGGCTATGCAACCACCGTCGGTTCAGACCAATCATGGATTGCAGGAAGCCGAGCGCGTCTCCGATCAGCTGTACATTGATTCGATCTACACGCATCATGCCGCTGGTACCCCTCATCATCATCAGGACCAACACGACCAAGGCCCCTCCGCGCCGCATTCGCCCAGCGGCCCACTCTCCAGTTCATCAATGTATCGACCAATGAGTGGAGTAAGTGCGATGGGTACCGTAGCTGGAACCGGAGGAACATATACCCTTCCTTACATGACGAGCAGTCCCACGGAACTGACGTCGCCACCTCAACTTTGGAATGCTCAGGTTACAGGCCTGTCTGGACTTCCCATTCCTGAGGATTATGGCAGCAAATCCTCGAGTACGGTGTCCCATCAATCATTACCGGCTTTTTCGCAACCTTTCGGCACTCGGTCAAGTTTCCGCGGTTACAGTCCGCCATATTCAATCCCTCAGCAGAATACCACCGGCACTGCCGCTGTCTCCGCCGTAGAAGCTACTTCTTGGACGTATGCCAACGTATCGCCAACCGATGCGTTAACGACACAATATGGCACACCAACCAGGCGACAAACTGTTAACTCGGCGACAGCACCGACGCAAATTAGCGCCGCGGCGAGTTTAACTGCaaTGCACAACATCGAAGCAGAGTACTTTACGGAGGGTCGCGAGTGCGTGAACTGCGGCGCGATTTCCACACCCTTATGGCGCAGAGATGGTACCGGGCATTACCTCTGCAACGCATGCGGTCTCTACCATAAGATGAACGGAATGAATCGTCCATTAGTTAAACAGCCACGTCGCCTGTCTGCCACGAGACGCGTCGGTCTATCTTGTAGCAACTGTGAAACCATGACGACGTCCCTGTGGCGTCGCAACTCACAGGGCGAACCAGTGTGCAATGCCTGTGGTCTTTATTACAAGCTGCATGGTGTCAACAGGCCATCGACTATGAAGAAGGATAGTATTCAGACGCGCAAGCGAAAGCCTAAGGGTGGAATGAAAAGTAGCGATACGCCTCTTTCAGGCAGTGTCGCGCAATGCAcgaacaataataacaacaataacAATAGCGTTAAACTTGAACCAGATACTTACGGTGATCTGAGGATGGCGGCCCATACTGGCGTGTCGCAAGTGACATACCCGAGCAATCTCTACAGTAGTCCTCAAGCTTCGAGCAGAATAGTGCCTTATCAACCCGTGTATTACGATCTGATCACTTCGCAGCAGCAGTCACACCAACTGCTAGAGACCCATTCGCCAAAGATTGAATGTCCGTCTCCACCTTGCACCACTCGCTCGCCTGGAATAGTCTCAGCTAATCAATCACCTGATCATCACCAACTCACCTCACCACATATTGTCACTCTGAGTAGTCCGTCAACCAGTCCAGCCGGATCTAAAATTATGCTGGATAATGGTCACCTTGAGAGGTCTACGGTTGTGTCAATATCATCTTAA
Protein Sequence
MENGAMVEPTGAEAVAIAVAAVAAGADNHANEDSNTTYTLHELDYHPTHIIQESFGGGDMREEQQQQQVSQPHHQQHDTHHHHRQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPLPSSQHHHQQTQQYVQLGAREVPVPEGGDSTEASIAPEGRRAGSHMPHSTMHRYGIETLSPTTTDHHHHQQQQHHHHHHLSEVHQHTALSSAHRHLEDSQQHHQETDEDVDRGVSSITAAMRGARGDYLGVLFPTLTSSSSTSSNGGSSHHHHHTSHHLEDVLSEESYLQHQIRTGGAPPTGGGSPSVRTVGGSPTSSHSPHDDQALSSPHRQAQESYSPTEQGRLQSFTHLTAMQPPSVQTNHGLQEAERVSDQLYIDSIYTHHAAGTPHHHQDQHDQGPSAPHSPSGPLSSSSMYRPMSGVSAMGTVAGTGGTYTLPYMTSSPTELTSPPQLWNAQVTGLSGLPIPEDYGSKSSSTVSHQSLPAFSQPFGTRSSFRGYSPPYSIPQQNTTGTAAVSAVEATSWTYANVSPTDALTTQYGTPTRRQTVNSATAPTQISAAASLTAMHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSATRRVGLSCSNCETMTTSLWRRNSQGEPVCNACGLYYKLHGVNRPSTMKKDSIQTRKRKPKGGMKSSDTPLSGSVAQCTNNNNNNNNSVKLEPDTYGDLRMAAHTGVSQVTYPSNLYSSPQASSRIVPYQPVYYDLITSQQQSHQLLETHSPKIECPSPPCTTRSPGIVSANQSPDHHQLTSPHIVTLSSPSTSPAGSKIMLDNGHLERSTVVSISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00182325;
90% Identity
-
80% Identity
-