Tbic011889.1
Basic Information
- Insect
- Tetramorium bicarinatum
- Gene Symbol
- JARID2
- Assembly
- GCA_011636605.1
- Location
- VBVP01004628.1:1549-13273[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1 7.8e+03 -2.1 0.2 56 83 149 178 135 179 0.66 2 2 2.1e-23 7.9e-20 71.6 0.1 6 89 1357 1438 1353 1438 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTGAGTCGCAACgataagagaaaaaggaaggagGGAGACCTAGTGGACCTCATGGAGCCACTTTCAGAATCTCCGAAAAGGACCAAAGTTCATGCACAAAGAAAATTTGCGCAGGGTGCAACCACAGTATTTAATACATCACCTACGCCTGTCAAGGACAAGGAAAAAGCTAAACCTACTATGCTCACTGAATTAATAACTCACAAACGTCCAAATACGGAggattttttaacatttttatgctTCAGAggAACATCTATTTTGCCACCcagtttaaatttcttcaatattgacaacaaaaaagagaaacagggACTTAAGCCAGTTCGAACTTCTACAGAAAAAGCATCTTCTACTAATACTTTTACAGAGATTCAAAAACAAGAAACTACAtgccaaaaaaatattacaaaagtaaaacCTATTGTCtcgaataagaaaaaagtagctagtacattacataaaaacaTTACCAAGCTTAAGACAGCCACATCTACGGTCCAAGcgcttaaaaagaaatatcaagaACAACGCCTTGCTAAACAaagaatcaaaaataaattcaaaactaCTTGTGTTATGAGGACAAGATCGTGTACAGAAAGATCTATGTTGAAGGCTGGTCTTCAGTTGGCGCCGCGAAAATTCTTACCTAGAATCAAGGCGAAGAGACATGGCCTAAGAAGTGCTGTATTACCAGATAAAACTAACAAACCTTTGTCAAAAACAAAAGTGTTATCCAAACCAAAGAAGAAAGTCAATTCTAAAGCGAAAAATAGCGATACATCGAATACAGATGCGTCATCTGAAGAGAATGATGTCGAAGACAATGAAGAAGAAGAGTTACATGTGGAGAAATCGACATCGCAGATAAAGCGTAACATACAAAGAGGCATCCAAAAAAAGATCTGTACCAGAAGTAAATCAGAGATGAAGAGAGTTACAAGATCATCCAGTAGCACGATCCCCTCGCAGAATCTTTCCAGGAGGCCAACCAGAAAAACGAAGGAAGCAGCCGCTGTATATATGGAAATTCTTGGAAGAAAATTAGTGAGTCCAGATTTAGAAAATGATGATAACATTTCAGTTGAGAGCTTTCCCGAACTACCAAACGCTCGTAGAATAGCGCAAACGGAAAATGAGCTTAAAGCCAAAGTGAAACAGAGCAGTACCAAGACTGTCACTAAAACTAAAGACACGAAAGTTAACTCCTTCAGTAGTAACGCTAACAAGCGATTGGATAAGAGCAAAAACAACAAGTTGATTTTAAAGAGCAAACGTCTGATGAGAGTGCAGAGATATTGCGAAGAAGATAGCGACGAAGAATCAGAGAGCTCAGTAGAAACGAACAATACAAGACCAATTACCAGACAGAGTCTTGGAAAGATTGATAAACCGATTAGCAGGAGTCTTAGATCATCTTCCAAAGGCACAACTATACAAACCGAAATACAAAGTAATGTAAATAGCAAACCGAAGACCCAGGTTCAAAGTTATGTGAAAACagctaaagaaaaattcgtaataaaGCGTAAACGTGAccaaaatatatctaaaacatCGTCGGTTAAGATTAAGCAAAAAAGTCTTAAAAGTAATCAAAATGAGAAACCAGAATCCGAAGAGGAAACGCTGGGAATGTTGCTcagtaaaataaagaagaagaaagaaaatgacgAGGAGGAAGTGGAAGGACAGATTCCTGACAATATCAATCATATAAAAGACGGAAAAGTAACTCGCGGCAACGCGCAAAATGTGAAAGCAGATCTGTTGAGGATGTCGGACGACGAGGAATCTTTTCGTGGATTTACTAAGAAGGCGATATCAAAAGTATTGAATTCGTGTCAGACACATGCCAATGTTAATTTGCTAGTCACAGAGTCTGATGAAAAGTTGAATTTGTCTAAAACATTGGACGTATCGCAAACAATGGAACAAAGCGTTactttacaagaaaataaagtaaaaacgtTATCGATCAAAGCTGGTTCCCCGGTCGCAAATTCGTTCAACGGCGAGTGCAGCGTATCTGGGCAGGATCAAAAATCGGTATTGAATTTGTCCGTAAAAACGCAAAGCTCGTTGTTGCCATCTATGGAACAGACGAAATGTAATCACGAAAACGAGATTTCTTCCAATCTTATGCCACTGTCTAATCTGCACACAAGAAAAGAACGAGTGAATATGTCTACCGAACAGATTGAAAAATGGTTGAACGAAAGCTCGTTCGCCAAAGAAGAGAGCAAGTTGGAAATGGAAAACGTTTCCAGCTTTAGGTATGATTCGgcgaaggaaaaattaaaggcGGACGTTTCGCATCTGTCTATCTCGACAAAAATTCAACATTTAGTACGCCCCGTCAACGTCACTCTTTCGAAATTATCGGACAAAACGAATTTGAAAGACCGTGCGGGAATACACAGCCGAAATGTAATACCAGCATCACCGGATATGCACAATACGGGAGTAAAACAACAGAATGCGATTGTCGACAAGAATAAGATTGCTATTGAGACGAAAGAGattgtcaaaaataaaattgagaaaatgaaCAGAGATACTTCTCTCGCTGAAGATACTAGTGATACTGTGTCCAAATCGGACCAAAATTCGGTGGATGGTTCTATAGAGAAGAAATCGCCaacggaaaagaaaatatttcaaccgCGAAAGCCCTTTTTACCCAAAGTCAAGGAACGTAAGACTGTAATACGGAATGCAAACGCGTTTTCGCCGGAAAACGAGAGCAGCGTTTACGCGTTTGAAAGCGACACTGAGGTTCCTGTTAGCACACCGTTCCGGAGAAGGATCAGAGATGATGCGAAACGTTTGACTATGATAATGGAATCCACAGCGACTGGTAGAAAGGTATCCGAAACCAAAGTGATTGCCGAAACCAAGAAATCGAAGAATTCCGAATCGTCAGACAGCAAGGAGAAACCGTCGAACGATCTTATGACGCCCATAAGGAAAGAAGACGCAAAAGAGACGCAAGGACCGACAAATGTGGCAAACACGGTTCCAGGCGTGAACAAGTTTGAACTGCCCAAGAATTTTGCAAGCTTGACCAGTGTCCAAGTGCTACCGCTCGATAAACTCACGACGAGTTGGAGCAACGTAAATTGCAGCGCTTCTATAGCGGTGCAGGTGAATCTCGATGAGACCATGCAGGAGCAAGAAAGCGATGCGAGTCAGCAGAAAAGTACCGAGATATCCACTCAGACTGAGATGAATAACgagaacgacgacgacaacgacggaCAGCTGTTTTACATTCCGTTGCAGGCTGTTACGAGGAGCGGTCCAAATGTGCAAGGTCAACAGCTGATACAGGGTGTCGCCGTTAAGCTTGGCACGGAGGGACCGACTGGCCCTAATCAAAGAGTGCTCCTTCGAGCTAAGTTGGTCACTAAGCCACCGTTATCCGTGGCACGTTGTCCGCCAGTAGGAACGGTACAACCGACAACACGTACTCCGCCCAATCCTACGGCAATTACAGTAGGGCAGCAGGTACCATCGACGTCAACGACCGAGACTGTGTCGACTACGATAGCAAGTATGCCGAGTGTGGAGACGCAACCAACGCAGTCATTAGCTTTCAAAAATGAAGTCTCGGTGCCAAATCTGAATCGTCAAAATGTCAGTACGAGCGCAAGTAGCGGTTTGGAGAAACTCACAAAGTCACCGAAGTCGTCTAGGGAAAGGAAAACTTCTATAGATTCGACAAAAAGCGGGAAGAGGACACAAATGAAATGCAAACAAAGAGCCTTGGACTTATGCTCTTCGAGCAACAGTACGACGTTTCCAGGCACGAAGATGGGGAATGATGAAGCTCGCGTAGTCGAGGCGCCAACATTTCATCCGACAGAGAAAGATTTTCAGGATCCATTGGAGTATATAGACAAAATAAGGCCGATCGCTGAAAAATTTGGGATATGTAGAGTAGTTCCTCCACCAAATTTTAagCCGGAATGCAAGGTGTCTGACGATATGAGATTCACTGCTTATAATCAATATGTACATCGCATGCTCCATAGATGGGGTCctaatgtaaaagaaatgatggctatcaaaaaatatttagctaCTCAGAATATTACTTTGACTCAACCTCCATGgATTGGCGGAATGGAAGTAGATTTACCTCACTTATATCAAACAGTTCAAAGTTTGGGTGGATTGAAAgaagttattgaaaaaaagaaatggcaGAAAGTAGCAGATGGCATGAAAATACCGAAATCAGCACAGGATCGTGTTACTAAACTAGATgacatttattgtaaatatttactgCCATATGATACATTATCGCCAGaggAACGTGGGAAATTATTTGATGAGGTGGAAGCTGAATGGATGAGAAAAGAAAGCAAAGCTTTGCAAAGGCAAGAATCCTCCAATGATAATGATGAAGAAGAGGATGAGGACAGTTCTGATGAAATTGAAGAATGCATTGTGAAAGGAAGAAATATGCCATTGAACGCTTTTTATCGAATTGCCCGTAATACGCAACGTATGTGGTTCGGTGAAAATCAACGAGGAAACGAAGCCGAAGGTGCTTCCGCCGATGAAGTAGAACATGCATTTTGGAAACACGTTGCTGAGAGAAAACGTCACGTTTGCGTACATGCGGCAAGCATTGATTCCAGCGGTCGTGGATTTGGCTTTTCTGTTGCAAAAAACAGCCCATTCGCTAGACATCCTTGGAATCTGAAAGTTCTCACTAACAACGCTGGATCAGTATTGAGAGCTTTAGGTCCACTAATGGGTGTGACCGTACCAACATTACACGTGGGTATGTTATTTAGTGCTTGTTGCTGGTATCGCGATCCGCATGGTCTACCATGGATAGAATATCTACATACAGGTGCCAAAAAGATTTGGTACGGAATACCTGATGAGCATAACAACAATTTTCGAGAAGCGCTTTCGAAAATGGTACCACGATATTGCAAAAACAAGACTATATGGTTACCTTCTGATACTGCCATGGTTCCGCCGGAATTATTAGTATCCAATGGCGTACCATTATGTCAGATAGTGCAAGAACCAGgacaatttataatagtatttCCAAAAGCGTTCACATCTAGTATATGTACCGGTTATGTAGTATCCGAAAGCGTATATTTCGCACAACCATCCTGGTTAGAAACTGCGGAACAAGTATTTAAGGACATACAAGATAGTTGTGAACCTTCGATCTTTTCATTCGAgagattgttatttaatattattaacgacACAAGATCTCacatagatatattaaaacagATATTGCCGAGTGTGATAAAGATTCGCGAAAAGGAATTAGATTATCGTAAACAACTGGAAAATGTGGGTCTTACCAATAGAGAAAGATTGCCTTTGCCAGATAGtggaaaagggaaaaaagggaaaaaagtgaaagaagATGATGGCGATTTTGAATGTGAGATATGCAGAGCCAACTTGTTTGTCTCTTTGATAAACAATTCGCAAGACGACAGCGTTTATTGCTTGCCGCATGCATTGCATTTAATCAGTTGTAAGAAGCAAGTTTTGAAACATTGTACTCTGATGTACACATATGACGAAgaCGAATTAGACGAATTGATTCACAAACTGGAAAACAGGATTGAAGCCAAATCTAAAAAAActaatcaaataaaacaaaataagtaa
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATTVFNTSPTPVKDKEKAKPTMLTELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNIDNKKEKQGLKPVRTSTEKASSTNTFTEIQKQETTCQKNITKVKPIVSNKKKVASTLHKNITKLKTATSTVQALKKKYQEQRLAKQRIKNKFKTTCVMRTRSCTERSMLKAGLQLAPRKFLPRIKAKRHGLRSAVLPDKTNKPLSKTKVLSKPKKKVNSKAKNSDTSNTDASSEENDVEDNEEEELHVEKSTSQIKRNIQRGIQKKICTRSKSEMKRVTRSSSSTIPSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNISVESFPELPNARRIAQTENELKAKVKQSSTKTVTKTKDTKVNSFSSNANKRLDKSKNNKLILKSKRLMRVQRYCEEDSDEESESSVETNNTRPITRQSLGKIDKPISRSLRSSSKGTTIQTEIQSNVNSKPKTQVQSYVKTAKEKFVIKRKRDQNISKTSSVKIKQKSLKSNQNEKPESEEETLGMLLSKIKKKKENDEEEVEGQIPDNINHIKDGKVTRGNAQNVKADLLRMSDDEESFRGFTKKAISKVLNSCQTHANVNLLVTESDEKLNLSKTLDVSQTMEQSVTLQENKVKTLSIKAGSPVANSFNGECSVSGQDQKSVLNLSVKTQSSLLPSMEQTKCNHENEISSNLMPLSNLHTRKERVNMSTEQIEKWLNESSFAKEESKLEMENVSSFRYDSAKEKLKADVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRAGIHSRNVIPASPDMHNTGVKQQNAIVDKNKIAIETKEIVKNKIEKMNRDTSLAEDTSDTVSKSDQNSVDGSIEKKSPTEKKIFQPRKPFLPKVKERKTVIRNANAFSPENESSVYAFESDTEVPVSTPFRRRIRDDAKRLTMIMESTATGRKVSETKVIAETKKSKNSESSDSKEKPSNDLMTPIRKEDAKETQGPTNVANTVPGVNKFELPKNFASLTSVQVLPLDKLTTSWSNVNCSASIAVQVNLDETMQEQESDASQQKSTEISTQTEMNNENDDDNDGQLFYIPLQAVTRSGPNVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPVGTVQPTTRTPPNPTAITVGQQVPSTSTTETVSTTIASMPSVETQPTQSLAFKNEVSVPNLNRQNVSTSASSGLEKLTKSPKSSRERKTSIDSTKSGKRTQMKCKQRALDLCSSSNSTTFPGTKMGNDEARVVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQNITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVEAEWMRKESKALQRQESSNDNDEEEDEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNEAEGASADEVEHAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVPLCQIVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHIDILKQILPSVIKIREKELDYRKQLENVGLTNRERLPLPDSGKGKKGKKVKEDDGDFECEICRANLFVSLINNSQDDSVYCLPHALHLISCKKQVLKHCTLMYTYDEDELDELIHKLENRIEAKSKKTNQIKQNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423428;
- 90% Identity
- iTF_01422021;
- 80% Identity
- -