Thoc021480.1
Basic Information
- Insect
- Tetragonula hockingsi
- Gene Symbol
- pnr
- Assembly
- GCA_010645185.1
- Location
- WIUV01000617.1:1-966[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-19 1.1e-15 57.9 6.2 1 35 10 43 10 44 0.98
Sequence Information
- Coding Sequence
- ACAGCGACCAGGCGGCTGGGCCTGTGCTGCACGAACTGCGGAACTCGCACCACCACCCTCTGGAGACGCAACAACGAGGGCGAGCCGGTGTGCAACGCTTGCGGCCTCTACTTCAAGCTGCACGGTGTCAACAGACCGCTCGCGATGCGCAAGGACGGCATACAGACTCGGAAACGGAAGCCGAAGAAGACGCCCGAGCCGAACGCCAGATCGTCGTCGAGCGTCGATCACGAGACCACCGCGGTGTCCGCCGCTTCCTCTCCGTCCACCGaattaaaaaatagtcagcagcagcagcagcagcagcagcaacagcaacagcaacagcagtcTCAACATCAGCAGATCGAGGTGTCCAAATCGTCGGCTAGTTCGTCGGACAGACCGGTCTACCTCGGGCACACGTCCTTGTTGGCGACCGGGAGCGTCGCCACGGTGAAGACCGAGCCGCGAAGTTGCGACGGCATCGTCGGTCAACCCTACTCCTCGTACTATCAGCATCCCCATCAGCTTGGGGTACCAGCGACCAGCGAGCATCAACAGCAGACTTACTACGGAAGCCAAGAGGCGCCGTATCATCATCAGCATCACGTTACCGCGGCCGCCAAGTTACTCGCCTCTACGTAA
- Protein Sequence
- TATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARSSSSVDHETTAVSAASSPSTELKNSQQQQQQQQQQQQQQQSQHQQIEVSKSSASSSDRPVYLGHTSLLATGSVATVKTEPRSCDGIVGQPYSSYYQHPHQLGVPATSEHQQQTYYGSQEAPYHHQHHVTAAAKLLAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01418686; iTF_01419977; iTF_01419331; iTF_00755127;
- 90% Identity
- iTF_01419331;
- 80% Identity
- -