Basic Information

Insect: Tetragonula hockingsi
Gene Symbol: ZNF236_2
Assembly: GCA_010645185.1
Location: WIUV01027410.1:1-2053[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00061 0.11 14.0 1.4 2 23 3 24 2 24 0.96

2 8 2.7e-08 5.1e-06 27.7 1.4 2 23 105 126 104 126 0.98

3 8 7.4e-05 0.014 16.9 3.5 1 23 132 154 132 154 0.99

4 8 2.5e-05 0.0046 18.4 1.9 1 23 160 182 160 182 0.98

5 8 0.0001 0.019 16.5 2.5 1 23 188 210 188 210 0.98

6 8 7.3e-07 0.00014 23.2 0.6 2 23 463 484 462 484 0.97

7 8 3.5e-06 0.00066 21.0 4.5 1 23 490 512 490 512 0.98

8 8 2.1e-07 3.9e-05 24.9 0.7 1 23 518 541 518 541 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00061	0.11	14.0	1.4	2	23	3	24	2	24	0.96
2	8	2.7e-08	5.1e-06	27.7	1.4	2	23	105	126	104	126	0.98
3	8	7.4e-05	0.014	16.9	3.5	1	23	132	154	132	154	0.99
4	8	2.5e-05	0.0046	18.4	1.9	1	23	160	182	160	182	0.98
5	8	0.0001	0.019	16.5	2.5	1	23	188	210	188	210	0.98
6	8	7.3e-07	0.00014	23.2	0.6	2	23	463	484	462	484	0.97
7	8	3.5e-06	0.00066	21.0	4.5	1	23	490	512	490	512	0.98
8	8	2.1e-07	3.9e-05	24.9	0.7	1	23	518	541	518	541	0.97

Sequence Information

Coding Sequence: TCGCTTAAATGTTCGTCGTGTGAGAAGCAGTTCAACAACAGAGTCGAGCTGCGATCgcataataaaattcacgaaactTCAATGTGGAACGCTTCGGGTGCTGCCAGTGCAGACAGTTTGGCGCTTTCGTCGGAAATGCATCGATCGCGGGTGGCAAATGGTCATCGTCATTCGCCAACAAACGATATCGGGATAGAACCAGATTCTACCGTTTCGGAGAAAGTTCTGCTGGATACAGTAGCTGAAAGAGAAGTAATGGATCAAGTAGATAACATATTGGCggggaaaaaggaacgaaaagagTATACGAACAAATGCAAGTATTGCCCAAAAACTTTCCGCAAGCCGAGCGATCTGATAAGACACGTACGCACACACACCGGGGAACGACCGTACAAATGCGATTACTGCAACAAAAGCTTCGCCGTGAAATGTACTCTGGATTCTCATACGAAAGTTCATACGGGAAAAAAGACGTTTCGTTGTCACGTGTGCAATAGTCTGTTTGCGACCAAAGGTAGCTTGAAAGTTCACATGCGTCTGCATACGGGTTCGAAACCATTCAGATGTCCCATTTGCGATTCGAGATTTCGAACGTCCGGCCATAGGAAGGTGCACTTGTTGAAACACGCACGCGAACACAAAGACAACGCGAAAAGAAGGCAAAAACATTTGAAAGTTGCGGTCATAGCAGAGGTGGCGGCAAATCTTGAAAGATGTaacgagaaggaaagaaaaatggacaGTTTCGAGGGAAAGCAACAATTAGAAgcggaagaggaggaggaggagaaggaggaggaggaggagcagcagcagcagcagcagcaacaacaacaacaacaacaacagcagcagcagctttCGCAGACAGTCGCGGGATTAACGTCTCATCTAGAGACGTATAGTATTGAAACAGCAACGTCCTGTTTAACcgatcaaattaatttcgacgcGGAAGATAATATCGTGTCGAACAACAATCAAACGATAGTGTCCATAAACGAAAGCAATCAGTTGGTtacgaatttacattttcttttgacGAACGGTCTCGTTACCATTCAAACCGAAGAATCGTTGTTGTCGCAAACATCCTCACCCTCGGTTAACAACAATTCGCAtcatcgatcgacgatcgggCTTCCCGACCCGGATGGATGTGCGTTGTCCAGCGTTGTGTCCGATGCGAACGAGCAGCATACCAAGGGAGAAATTCATATAGGACAAATGTTAAAAACGCCATCGAACAATTGCCTTTTAACAGTGTCGACAACCGTGACACCGCCGCGATTAGAGCAATGCTCGAAAGTGGCTACGGAAGAGACGTTGTCGGTGGTAGCCGATGACAAACCGAcgattaaaggaaataatctGTCGAGAAAGGAGTGCGACATTTGTGGTAAAACGTTCACGAAACCGTATCAAGTCGAGAGGCATAAACGAATTCACACGGGTGAACGACCGTACAAGTGTGACCTGTGTACCAAATCGTTTGCTCAAAAATCAACTCTACAGATGCATCAGAAACATCACACTGGCGATCGGCCGTACGCTTGCCCGTACTGCGAATATTCCTTCACGCAGAAAGGCAATCTTCGAACGCACGTGAAACGCGTCCATCAGTTGGATACCGTGGACGTTAAGAAGTGGAAGCGCAGCCGTCAATCCTTCCTGTCGAAAACAACGATGTTTCAAGAAAACACCATCGAAGATAAGAGTCTAAATTTGGACAACATATCGTTCGTAGAGCTTCTTAAATAG
Protein Sequence: SLKCSSCEKQFNNRVELRSHNKIHETSMWNASGAASADSLALSSEMHRSRVANGHRHSPTNDIGIEPDSTVSEKVLLDTVAEREVMDQVDNILAGKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCNKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNAKRRQKHLKVAVIAEVAANLERCNEKERKMDSFEGKQQLEAEEEEEEKEEEEEQQQQQQQQQQQQQQQQQLSQTVAGLTSHLETYSIETATSCLTDQINFDAEDNIVSNNNQTIVSINESNQLVTNLHFLLTNGLVTIQTEESLLSQTSSPSVNNNSHHRSTIGLPDPDGCALSSVVSDANEQHTKGEIHIGQMLKTPSNNCLLTVSTTVTPPRLEQCSKVATEETLSVVADDKPTIKGNNLSRKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACPYCEYSFTQKGNLRTHVKRVHQLDTVDVKKWKRSRQSFLSKTTMFQENTIEDKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -