Thoc023873.1
Basic Information
- Insect
- Tetragonula hockingsi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_010645185.1
- Location
- WIUV01002966.1:13066-18358[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-19 2.9e-15 56.8 0.0 1 43 339 382 339 384 0.95
Sequence Information
- Coding Sequence
- GTGGACGACAAAGAACTGTCCGGAGcggaagaggagaaagaagtgGAGAAAGCTCTGTTGAAGCCACTGTTGTCCTTGGAGGACCTCGTCAGGTTTTCCGCCCTCGAAGGAAGCGGCGGTGATTCCCTAAGAACATTGCTACAGCGAGGACACGAGACGGGAGCCGAGTGGCCAGGACTCGAACACGCCAACATCGGTCCGTATATTCAAAAGATGCTTGCAGCCGCTGCGCCATTTAAAGGCATGGAGACGCAAGACTATCGCATTCCAGAGGTGATGAGAAGGCTGATGAGCGAGGACAAGAGGCTAAACAAAAGCGTAAACGGGGACCAGTCGCAGCCGTCGCATCAGCAGCTCCATCATCATCAAACGCACTCGACTCATCCGCAAGGCCAGGCACAGTCGCAGacgcaacagcagcagcagcagcagcagcagcagcagcaacagcaacgtGGCCCGATAACGAACGACGATTTCAATCCGAATATCGAGGAGGAGGCGAGCGACAGTGCTCAGGGCAGAGCGATTCTCAAAATTCCGTCCTACAAGCCGGCGAGCACGCCCGGATGTTCAAGCAAAAACGGCGAGCCAACGTCGGCCGCGTTCGCGCAGGGATTCGCAGCGGCGACCGCAGCCTCGAGTCCAGGACTTCTGGAACGGGCGAGCCCCGCGTTCTCCGGCACCAGCAGCCCGACCAATTCCCTGGTAGGGAAAACCGTGGCCGTGAACTTCCGCGACGTGATCGCGAAAAGCATCagcgtaaaatttcaagaGGGTCAGACGGTGGCCACCGCTGGAATGCCCGGATGCCAGCCGAGCGGGGTGGTGCAGTCGCAGCAGACGATAATGGCGGACCCGAGCCCGTTCAAACGAGGTAGATACACGCCGCCTCAACCTGCGACGCAACAAGCTCAGACGCAGGCGAAACCGCAGACTCAGGAGGCGAACAAACCGAAACCAGCTACCGGTGGCAAAGGAACCAGACCGAAACGCGGCAAGTACAGGAACTACGACAGGGACAGCCTGGTCGAGGCTGTGCGCGCTGTCCAACGGGGCGAAATGAGCGTGCATCGCGCAGGCAGCTACTACGGAGTGCCACACTCCACTCTCGAGTACAAAGTTAAAGAGCGGCACCTGATGAGGCCAAGGAAGAGGGACCAGAAGCAGTCGGACGACAAGACGAAGGAGACCTCGGCGGTGACAGCGGCGGCAACGGCCGCGAACATACGACCGGGCACGGCGGACAAGAAGCCACAGTTGAAACCACAGAAACCGTTCACGTCACCGGGCGGTATGCCAGGGCCCAACGGAATCAAAATGCCGCCGTTCATCGAGGGCATGCCTCATTTGCCGTTCACGCCGTTCAATTTCTGGAGCCCGCCGCCGTTCATGCCGTCGCCGTTCATGGCGGGTGCACCGAACGTTCCAACGATTCTGCCGGAGCAATACTTCGCCACGAGTAGGATCCGCGGCTTGCAGGAACAACAAAGGAACGCGGCCATggtgcagcagcagcagcagcagcagcagcagcagcagcaacaacaacaacagcagcagcaacaccAGACACAGCGAGACAGAGACGGGATAGGCGTGGCTGCTGCGACGGCCGAATCACCGGGAACCTCGAATTCTCGTGGCACGCCGATGAGCAAAGCGCCGCGGGAGGTATCGGAGAGCCTGTACGACGGTTCGGGGGCGAACGGCAGTTTCTTGGACAATTTGATCAGGTCGAGCCTCGAAACGGGAATTCCAAGGGACCAGAGGGCGATGACCGACGCGAGGAACCAGCAACAGTCGTCCTCGCAGCAACAACTCCCGGAATCGATGAGGAGCAAAGCGTTGATCGATCAACTGTGCAGAAACTCGAGGAGAACGCCGGTACCGAGGCTGGCTCAGGACAGCAGCGAGGACGAGAGCTACAGGGGACCATCGGCGACCGGGAGGCCGATACCGGAGAGGCCGGAACGCGTACCCACCGTTGACCTTAGCCCGTCACCGTCGGAACGCGGTCGCAACGACGACGGAAGCGATCGCCTCACGTCGCCTCCGACGCCTCTCTCGATCTCGAGGGCCGGAAGCAGAGACGAGGACAGCACCCGGGATTCGAGGATAGATCGCAGCAGCAGGGAACGGGAGGTACACAACGGTGGACAGGAAGATCGCGATAAAAAGACCGTTCAGCAGCCGCAGTCGCAGCCGCAGCCGCAGTCGCAGTCGCAgtcgcagcagcagcagcagcagcagcagctgaATCACTACCCGGACTTACACAATCTTTACGCCGTATCAACTGAGAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGAgtcaacagcagcagcaacagcaacagccgtcgcagcagcaacagcagcagcagcagccgtCGCAACAGCAACAAAAGGAGTACGGTGCAGTGAGCGGACTGGTTGTACAGCTGCAACGGAGTTACAGCACCGGGAACAGCAGGTCCAGCGAGCAGACCAACAGCCAGCAACCGGCAGAGCAACGCGGACCGGTCATCAGCATGGAAGACTCCGTCGAGCagtag
- Protein Sequence
- VDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGHETGAEWPGLEHANIGPYIQKMLAAAAPFKGMETQDYRIPEVMRRLMSEDKRLNKSVNGDQSQPSHQQLHHHQTHSTHPQGQAQSQTQQQQQQQQQQQQQQRGPITNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAATAASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQEGQTVATAGMPGCQPSGVVQSQQTIMADPSPFKRGRYTPPQPATQQAQTQAKPQTQEANKPKPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQSDDKTKETSAVTAAATAANIRPGTADKKPQLKPQKPFTSPGGMPGPNGIKMPPFIEGMPHLPFTPFNFWSPPPFMPSPFMAGAPNVPTILPEQYFATSRIRGLQEQQRNAAMVQQQQQQQQQQQQQQQQQQQHQTQRDRDGIGVAAATAESPGTSNSRGTPMSKAPREVSESLYDGSGANGSFLDNLIRSSLETGIPRDQRAMTDARNQQQSSSQQQLPESMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSATGRPIPERPERVPTVDLSPSPSERGRNDDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSREREVHNGGQEDRDKKTVQQPQSQPQPQSQSQSQQQQQQQQLNHYPDLHNLYAVSTEKKSACDSKLIVDHSSQKSQQQQQQQQPSQQQQQQQQPSQQQQKEYGAVSGLVVQLQRSYSTGNSRSSEQTNSQQPAEQRGPVISMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01419556; iTF_00675937; iTF_00873716; iTF_01418269; iTF_01417620; iTF_00306167; iTF_01424282;
- 90% Identity
- iTF_00873716;
- 80% Identity
- -