Tdav006235.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetragonula davenporti
Gene Symbol
nfxl1
Assembly
GCA_010645165.1
Location
WIUW01006525.1:6389-9168[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1.1 1.1e+04 -3.2 1.1 15 19 126 130 125 130 0.81
2 20 0.14 1.5e+03 -0.5 0.8 4 10 161 167 160 167 0.95
3 20 5.5e-08 0.00059 20.0 15.1 1 18 175 191 175 192 0.98
4 20 1.1e-08 0.00012 22.2 14.3 1 19 229 246 229 246 0.94
5 20 0.19 2e+03 -0.8 0.1 5 10 270 275 267 277 0.88
6 20 0.0024 25 5.2 11.0 1 19 281 300 281 300 0.92
7 20 4.1e-05 0.44 10.9 9.2 1 18 336 353 336 354 0.97
8 20 0.0014 15 6.0 8.3 1 12 388 399 388 399 0.94
9 20 0.47 4.9e+03 -2.1 1.0 6 10 409 413 408 413 0.92
10 20 7.7e-08 0.00082 19.6 12.0 1 18 419 436 419 437 0.92
11 20 1.3 1.4e+04 -3.5 1.0 6 10 465 469 464 469 0.77
12 20 0.00044 4.7 7.6 7.1 9 19 484 494 482 494 0.90
13 20 0.0025 27 5.2 6.2 1 12 504 514 504 514 0.95
14 20 0.25 2.6e+03 -1.2 2.9 14 19 546 551 546 551 0.84
15 20 0.0023 24 5.3 8.5 1 12 587 598 577 598 0.80
16 20 2 2.1e+04 -5.7 2.7 6 7 614 615 610 618 0.50
17 20 0.00035 3.7 7.9 12.7 3 19 627 643 626 643 0.93
18 20 2 2.1e+04 -5.0 2.3 9 13 649 653 648 653 0.74
19 20 5.1e-06 0.054 13.8 12.5 1 16 688 702 688 708 0.86
20 20 0.72 7.7e+03 -2.7 0.4 5 10 737 742 737 742 0.92

Sequence Information

Coding Sequence
atgcagaaattCAAACGAGCTCAGGCAGAAAACAAACTGGCAATTAGCAAGCATTTAGAGGCAAATGCCCATTTGGAATCCTCCAGCGAGGATGAGGATGACAGGGGCGAGGAGAATATGCAAAATGTTATTGGAAAGATACTGTCTGCCTATCAAGGCGAGGAGGCAGATGCAGAAAAGATCTTgtcatatttaattaatatcttccAATCTGGCAATGCTGTTTGTTTAATATGTATCTCTACTGTGAAAAGAGCAGATCCGATTTGGAATTGCAACAAATGTTTTGCTTTTCTACATCTGTCTTGCATTTCGCGTTGGATACAGGATAGCGTGAATGTTAAACGTGAGAAGGGTATCGAGCCAACATGGGCATGTCCAAAATGTCGCATGGAATACAAGGAAGATGACAGTCCTCGTAAGTATAAGTGCTTTTGCAAAAAAACTATAGATCCTCCGTATAGTCCATGGAACATTCCGCATTCCTGTGGAGAGACATGCAACAAACTGTTACAACCAGAGTGTGGCCATAAATGTGTTTTACTTTGCCACCCTGGGCCATGTCCTCCTTGTGCAAAGACAGTATCCGTTAAATGTTACTGCGGCAAACAGGCGCCTCAACAACGACGATGCAATGCCAAACATTGGAGTTGCGGCACCGTATGCAACAAAAAGTACGAATCATGTTCGCACACTTGCAAGGAAGTGTGTCATTCAGGGAGATGCCCACCTTGTTCGGAGATACTATCGCTGGAATGCCACTGCAACAGTAACAAGGAATTCAAGCGATGCTCGGAAGGCTCGTGGACCTGCGACAAACCCTGTGGCAGACCCTTTTCTTGCAACGTTCACACCTGTGAAGGTAAATGTCATTTAGACGACGACTGCGGAACCTGCCCACTGGAGAAGAACAGAACGTGTCCATGTGGAAAGAAACGTTACGCCGTTTCATGCAACCAGGAACAATTACCAACGTGCGGAGACACATGTGGAAAGTTGTTGAATTGCGGCTCGCATTACTGCAACATGAGATGTCACACGGATCGTTGTGGACAGTGTTTGGAAGTAGTCACAAAGTCGTGTAGATGCGGCAGCTACAAAAAGGAGGTCGCTTGTGGCAAAGAGTTCCATTGCAACAAGAAGTGCGTGCAGATACGTCTGTGCGGCAGGCATTCGTGCAACAAAAAATGTTGCGACTGTCTGATCAAAAATACGTACAACGCTTGCGAGAAGGTATGCGATAACACTCTGAATTGTCGCAAGCACAAATGTGCTGCCCCTTGTCACAGTGGCCCCTGTTATCCATGCGCACGAACCGACGTTGTTCAATGTAGATGCGGATACAACAAGATAACGGTGCCGTGCGGTACGAAAAGGATCAAGCCACCACCTTGCAATAGGCCGTGCAAAATACCGCCGATCTGCCATCACTCCAAACGAGAAACTCACAAATGTCACCAAGGCTACTGTCCACCCTGCAAAAAGTTATGCGGCTTGGTATACAGACGATGTGGCCATTCTTGCGTCGCTGTTTGTCACACAAAAGTTTGGACGAAGGTAGGCAAAAGTGACGCGAAAGTGCAACCAGCAGGGCCGTGGGACGTTCAGAAGGAAACCATGCAGCTGAAAACGTTTGCGTGTCCGCCGTGTAAAGTCTCTGTGCCAGTCACGTGCTTAGGAGGACACGAGACACGTTCGTGGGCCTGTCACGAGGCCAAGCCTACCTCCTGTGGAAGATTGTGCGGTAGAACGTTACCGTGCAAAAATCACACGTGCGAATTGATTTGTCACAAAGTACCGTCTTCCGAAGAAACTAAGAATGGCACACCGTGCATGGACTGTGAGAGCTCGTGTCTACTTCCACGGCCGCCAGGCTGCATGCATTTATGCCCCAGGCTTTGCCATCCCGCGCCGTGCAATCCCTGCAAACAGATAGTTAAAACTCCGTGCCATTGCGGCATAAGTACCATATACCGTAGATGCTTCGAATTAACATCAGCCGCAATTGAAAAACGCAATGAATTGCTCAAGTGCGGGAATCAGTGCCCTAAAAATTATCCATGTGGACATCGATGCGCGAACGAGTGTCATCCAGGCCCGTGCAGAAACGAGAAGGAGTGCAGCAAGAAGATGAAGCTGTTTTGCGAGTGCAGACGGATTAAGAAAGAGTTTGTCTGTTCCGTGGTGCAGAAGGAGGGGACTTCGATAAAGTGCGACGACGTTTGCACGAAACTGAAAAACGAAAGACGCCAGGCCGAGGCTGCATTGCTGGAGCAGAAACGACGAGCGGAGGAGATGCGCAATCAGCAAGAGATAGAGAAGTTCGAGCGAAAGTTCAAACCCCGTCGTAAGGGCAGAGACAAGTCCGATAAGAAACCGTCACAGAACGAGACGCGCGGCAACTACAGGAGATATTGGATCTTAGCCGTGTTTGTATGTTTAATAGgcgttgtaatattttatgcaaCCGTTGGACAGTCGTGA
Protein Sequence
MQKFKRAQAENKLAISKHLEANAHLESSSEDEDDRGEENMQNVIGKILSAYQGEEADAEKILSYLINIFQSGNAVCLICISTVKRADPIWNCNKCFAFLHLSCISRWIQDSVNVKREKGIEPTWACPKCRMEYKEDDSPRKYKCFCKKTIDPPYSPWNIPHSCGETCNKLLQPECGHKCVLLCHPGPCPPCAKTVSVKCYCGKQAPQQRRCNAKHWSCGTVCNKKYESCSHTCKEVCHSGRCPPCSEILSLECHCNSNKEFKRCSEGSWTCDKPCGRPFSCNVHTCEGKCHLDDDCGTCPLEKNRTCPCGKKRYAVSCNQEQLPTCGDTCGKLLNCGSHYCNMRCHTDRCGQCLEVVTKSCRCGSYKKEVACGKEFHCNKKCVQIRLCGRHSCNKKCCDCLIKNTYNACEKVCDNTLNCRKHKCAAPCHSGPCYPCARTDVVQCRCGYNKITVPCGTKRIKPPPCNRPCKIPPICHHSKRETHKCHQGYCPPCKKLCGLVYRRCGHSCVAVCHTKVWTKVGKSDAKVQPAGPWDVQKETMQLKTFACPPCKVSVPVTCLGGHETRSWACHEAKPTSCGRLCGRTLPCKNHTCELICHKVPSSEETKNGTPCMDCESSCLLPRPPGCMHLCPRLCHPAPCNPCKQIVKTPCHCGISTIYRRCFELTSAAIEKRNELLKCGNQCPKNYPCGHRCANECHPGPCRNEKECSKKMKLFCECRRIKKEFVCSVVQKEGTSIKCDDVCTKLKNERRQAEAALLEQKRRAEEMRNQQEIEKFERKFKPRRKGRDKSDKKPSQNETRGNYRRYWILAVFVCLIGVVIFYATVGQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00983909;
90% Identity
iTF_01420631;
80% Identity
iTF_01418700;