Basic Information

Insect: Tetragonula davenporti
Gene Symbol: Prdm15
Assembly: GCA_010645165.1
Location: WIUW01000001.1:136119-138793[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.6e-05 0.0018 18.9 4.1 1 23 252 274 252 274 0.98

2 12 0.00043 0.048 14.4 2.9 1 23 279 301 279 301 0.98

3 12 0.00067 0.073 13.8 1.4 3 23 312 332 311 332 0.98

4 12 0.0003 0.033 14.9 5.7 1 23 420 442 420 442 0.98

5 12 0.0015 0.16 12.7 1.9 1 23 447 471 447 471 0.90

6 12 9e-07 9.9e-05 22.8 1.0 1 23 509 532 509 532 0.96

7 12 1.8e-06 0.0002 21.8 0.8 1 23 565 587 565 587 0.99

8 12 0.00014 0.015 16.0 4.0 1 23 601 623 601 623 0.96

9 12 0.00013 0.014 16.0 4.7 1 23 629 651 629 651 0.98

10 12 0.0011 0.13 13.1 3.2 1 23 657 679 657 679 0.98

11 12 8e-05 0.0088 16.7 6.6 1 23 685 707 685 707 0.97

12 12 0.00018 0.02 15.6 0.3 1 21 713 733 713 734 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.6e-05	0.0018	18.9	4.1	1	23	252	274	252	274	0.98
2	12	0.00043	0.048	14.4	2.9	1	23	279	301	279	301	0.98
3	12	0.00067	0.073	13.8	1.4	3	23	312	332	311	332	0.98
4	12	0.0003	0.033	14.9	5.7	1	23	420	442	420	442	0.98
5	12	0.0015	0.16	12.7	1.9	1	23	447	471	447	471	0.90
6	12	9e-07	9.9e-05	22.8	1.0	1	23	509	532	509	532	0.96
7	12	1.8e-06	0.0002	21.8	0.8	1	23	565	587	565	587	0.99
8	12	0.00014	0.015	16.0	4.0	1	23	601	623	601	623	0.96
9	12	0.00013	0.014	16.0	4.7	1	23	629	651	629	651	0.98
10	12	0.0011	0.13	13.1	3.2	1	23	657	679	657	679	0.98
11	12	8e-05	0.0088	16.7	6.6	1	23	685	707	685	707	0.97
12	12	0.00018	0.02	15.6	0.3	1	21	713	733	713	734	0.93

Sequence Information

Coding Sequence: ATGGAAGTCGAAAATAAAGcaacaattttatcaaatgatTGTGGCAATGTTTGCCGTGTTTGTCTTGCTACAAATCAAAATAACCAATATATTTTCGATGGTAAGCGAAGTAATTTGATTAACGAAGATATAATTGATTTGCCCGAAAAACTTCGTTTGTGTACTGGTGTGGAGGTATTGGAGAATGATGGTTTACCTTCCACTATTTGCacgaaatgtatattaaaaatcaatgatGCTCATGAATTAAGAAAGCAATGTCAGCAATCTGATATCCGATTAAGAGAATTGTATGGTAAAGTGGAAAACATTTATAACATCAATTTATGTAAGACTACAAAAgaTCAATATTGTCAAACTGATTATTCATTTACTTCTGAtttaatcaaaattgaaaacgattcATTTTCTGCAATGGGTTATAATTCTTATCCAACAGTAATTCTTAATCCTGATACTAAAGACATAAAAGATCATGAAGTAATTAATGAATCAAAGTAtacagaagagaaagaatccAATAGTAACCTGAATAAACAAAATACTTATATCAAATGTAAGCAAgcagaatatgaaaaaaatgttacaggaAAGGAAGTTTATCGAACAAGAAGAATGACAATGTTTAAAAGAGTAACAtctatagaaaatttaaaaaatcacaaaGAACGACAAAggcaatatataaaaaagaatacagtCATTAAATGGGATAATGCAGCAGATATAAACAAAGTAGAGTCTCAAAGTTCTTATAATTGTCCAAAATGTACTAGGTGTTATTCTACCAAAAGGTCTTTGGATAGACATATATTAACtcatgatgaaaaaaaatttacatgtgataaatgtaacaaatacttttttcaacttgataaattaatacagCATACTAAACTACATATTGTTAAGGAAAAACCTAAACCagtattatgtaaaatatgtaacagaaattttagaaaaactgATACTATGGTAAGACATTTAAATGTTCACAAAAGAACTAATCCAAAGGAAGTCTTTTCTATTCTAAAAGAAATtagagataaaagaaaattggagaACATAATTGAAccagaaaaaagagaagtggGAAATAgtaaagatgaaaaagaaacagaggaaGAAAGCATTAGTGAAAGTATTACTTCAAATGTCCTTAAAAGAAAGGCTTTAGAATCTAAAGATAAAAAGTCTAGTTCTTTGTTATCAGAGGTAACTATTGAAAACTTTGATTCTTCTGATTATGAAGTACCTTATCGATGTAACTACTGTACTAAGCATTGtgcgaacgaaaaattacttCAAAAACATTTACAGATTcatattggaaaaaaatttgtttgtaacgtttgtaatatgaaattcttCCGACAAGATAGATTAAACAGCCACAAGAATCGATATGGacataatgaaaattcagcattagaaatacaaaaacCAAGTGACGACAAGTCAgccattaaattaataaatagttggATTCGAGAGGAACTTGATTCagataatgaagaaaaaggctttccttgtaaaatttgtggaaaatcatatgatacaaaaaaatcttTACTGAAACATCAATTGAGTATGCATaatatagaaagagaaaactgCACATCGTGTGGTAAGATGTGTGCTTGTGatgaaaaggagaaaaaccaacataaatcaaacgaaatattaaaaccaTATCGATGCGGAGAATGTAATAAATCCTTTgagaaggaaattaaattgcaaaaacatATAAGAATTCATGAACGTGCTAAAGAACAACAAGATGTAAATTTTAAGCGATTTTTATGTCACATATGTAGCAAAACGTTTAGACAAAATACAGGTCTCATGTTTCATATGAGAACGCACACAGGATACAAGCCTCACGTTTGTAAATATTGCGGAAGAGGATTTACGTCAAATTCTAATTGTATTAATCATGAGAGAACTCATACTGGTGATAGACCATTTGTTTGTCATTTCTGTAGTGCTGCTTTTGCCAAATCATGTACACTTAAAGCACACATTACAACACATACGGGAGAAGCAAATTATCATTGTAAAACATGTGGAAAATCATTTAGAAGATTAAAGTATTTGAAAGAGCACAAATTTACCCATACAGGAGAAAAACCATATGCTTGTAAGATTTGTGGCACTGCATATAGCCATTCTGGTAGTTTATTTGTACATGAGAAAAAGTGTAAAGCACAGTATAATAGCTATCAATCTAATTcaacacaaaatatacaaacttATTGTGAATCCGAGACGTCTTCACCAACTCCTATTATTACAGTTTTACCGCAGGTTTATCTAAATAATGCTAATGCGATAAACacacaaaataataaaacctATATCGATAATatccaaaaaataaattctcagAATGTTGTTAATGCAAATGCTGTTAACACAGCAGATTTGCATATACACACGAATTCGGATATATCTGATGTTTCTTTAGCTGTTAAAAGTTTTGCTCTTATCGGACAGATGTTTCAATCATAG
Protein Sequence: MEVENKATILSNDCGNVCRVCLATNQNNQYIFDGKRSNLINEDIIDLPEKLRLCTGVEVLENDGLPSTICTKCILKINDAHELRKQCQQSDIRLRELYGKVENIYNINLCKTTKDQYCQTDYSFTSDLIKIENDSFSAMGYNSYPTVILNPDTKDIKDHEVINESKYTEEKESNSNLNKQNTYIKCKQAEYEKNVTGKEVYRTRRMTMFKRVTSIENLKNHKERQRQYIKKNTVIKWDNAADINKVESQSSYNCPKCTRCYSTKRSLDRHILTHDEKKFTCDKCNKYFFQLDKLIQHTKLHIVKEKPKPVLCKICNRNFRKTDTMVRHLNVHKRTNPKEVFSILKEIRDKRKLENIIEPEKREVGNSKDEKETEEESISESITSNVLKRKALESKDKKSSSLLSEVTIENFDSSDYEVPYRCNYCTKHCANEKLLQKHLQIHIGKKFVCNVCNMKFFRQDRLNSHKNRYGHNENSALEIQKPSDDKSAIKLINSWIREELDSDNEEKGFPCKICGKSYDTKKSLLKHQLSMHNIERENCTSCGKMCACDEKEKNQHKSNEILKPYRCGECNKSFEKEIKLQKHIRIHERAKEQQDVNFKRFLCHICSKTFRQNTGLMFHMRTHTGYKPHVCKYCGRGFTSNSNCINHERTHTGDRPFVCHFCSAAFAKSCTLKAHITTHTGEANYHCKTCGKSFRRLKYLKEHKFTHTGEKPYACKICGTAYSHSGSLFVHEKKCKAQYNSYQSNSTQNIQTYCESETSSPTPIITVLPQVYLNNANAINTQNNKTYIDNIQKINSQNVVNANAVNTADLHIHTNSDISDVSLAVKSFALIGQMFQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01418508;
90% Identity: iTF_01418508;
80% Identity: iTF_01420432;