Tcar009258.1
Basic Information
- Insect
- Tetragonula carbonaria
- Gene Symbol
- -
- Assembly
- GCA_010645115.1
- Location
- WIUU01000984.1:23507-26526[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.1 2.8e+03 -0.9 0.1 5 16 416 427 416 429 0.88 2 5 0.12 1.6e+02 3.1 0.0 2 18 432 448 431 456 0.79 3 5 0.42 5.7e+02 1.3 0.0 27 44 488 505 485 507 0.86 4 5 0.00028 0.38 11.5 0.1 3 44 516 561 514 563 0.92 5 5 0.077 1e+02 3.7 0.0 11 34 652 681 650 685 0.83
Sequence Information
- Coding Sequence
- ATGATAATGATCTCTTCACctgcaaatgaaaatagtGTGAAgttttctttaaagaaaaagaaaaggcaagTAGACAACACGTATAATAATGAATCGTTaaatgatgataaaatttcttcagtagtaggaaaaaaaaaagaaaaaaaaacaattccaACAAAAGTAACACAGAATGTTCATGCTGATaagaaagttaataaaaagttatcaGTTAATGATAAGATTTCTCCaataatagaaagaaagaaaccgaaagaaaaaaaagcaattacaaaaatattaacacaGAATGATTCTGCTAGTAAGagagttaataaaaaattatcaaataaaaataaaattcttaattttgaaactaaTCAGACAGACATAGATtcaagaaaaaattgcaatgatgatgaagtaataaataaaagtcaCGATTTAGGTAAAACTCCAAGAAAAAATAACAcagagaatattaaattagagaatttagaaaacatagagaatattaaaacagaaaatatacatttacttGAGACTCCAAAAAAGAGTGATATATCAAGAGATTTAGAAAGCACAAACATTAAAGAAAATGCAGATACTCCAATAAAATCCACTATTAAATTGGGTATTGATTCAGTGGAATGGCAGACACAAACTGAAATATCATCAGTATCTAAACAAAAGAGGAGATATCTATATAATGAAAGTacacctaaaaaaaaaataaaaagaaatcttaacAGTGATATTAGTGATCATGATCAATTATctgatattcaaaaaaaagaattatgcGACAACGAATTAGATGATTTTGAACATATTGAAATGTTACATGATCCCAATTCTTTGATAAACtttgaagaaaatacaattttttgttcAGCAATTGAAGTCATGCCAGATGATCAGAATATACAAATATCTAGAGACTCAAAGTCTGATCCGCTTTACATTactgataatgataatattagtataggtcgtgaaaatatagaaaatgaagaaaatgataCAGGAAGtaagattaaaagaaaaagaaaacataaatCTAGTAATACTGATGTAGATTCTGATGTAGATTACGAGTCTATAAAAGATGTTTCAGAAGATTTAGATTTTAATATACCAttagaagatgaagaagatgaattAACTGAAGAAGCAACAAAAagattatataatttgaaagtaaAGTTAATGCATGAAGTACCAATACAACATACAATTGAACATACAACAGgctcaaaaatattaacaaaacaaGAGAAAGAGCTATTCTTAAAATATGCATCACTAAAAAGTGGTGTATTTACACCCAgtgaagataaaattattatagataattggaaaaaattttgtaaaGTTCacaattggaattttaaatgTGTACATCCAttcattcaaatgaaatatgttggtaaattttatataagaaGCATggaagaaagacaaaaattcACTCAATTTTTAGCAAATGGATTGCCACGAAGGACATTGTATAGTGTTTTAAATAGATTTAAGTACTTATTTGGAAACCatgaaaaaagttttcaaagATATACATCTGCTGAAGACGAGACCATTTTATCTTACGTGAACAATAAACAAAATAGGAAAAGATTACGTCGATTTTCagaattaagtaaaatattaggACGCTCAAGTCATTCAATTTGGACACGTTATCAACGGCTTGAACGgatgcataaaaaaaataaagaacAATTGCCTAAAATTACATggtcattatttttaattgaaaaatttataaaaacttttatGAGTGTAACACTGTGTGATAATATAGAAGATTTAAAAGATGCTATTATTCCAAAAGTGGTTTGGcaaagattagaaaaaaaaataggtatAAACCATAATACATTGAGGAAATTCTGGACATATAAATTGCACATGCAATTATTTTGTCCAGaacgtatttatttaaatgatataaaaataaaattaattgaatatGTTTATGTAAAAGgaatttcgaataatcgagaaataatttggtcaaaagttgcaaaatattttgatgGAATTACTACTGCCTTTTTATGTAGAACATTTTCCAATCTCGTTAAAGAAGCAagtcaaaaaataaatacgaaagaatttcttgAAatcatagaatatttatataatgaaaagatacaaaatataaaggaCGAAGTAActgataaatttcttcctaGACTCTCTTGTAATAAcggaaaagttgaaattatagCTGAAGACTTGAACGAAGATACCAGTATGgaataa
- Protein Sequence
- MIMISSPANENSVKFSLKKKKRQVDNTYNNESLNDDKISSVVGKKKEKKTIPTKVTQNVHADKKVNKKLSVNDKISPIIERKKPKEKKAITKILTQNDSASKRVNKKLSNKNKILNFETNQTDIDSRKNCNDDEVINKSHDLGKTPRKNNTENIKLENLENIENIKTENIHLLETPKKSDISRDLESTNIKENADTPIKSTIKLGIDSVEWQTQTEISSVSKQKRRYLYNESTPKKKIKRNLNSDISDHDQLSDIQKKELCDNELDDFEHIEMLHDPNSLINFEENTIFCSAIEVMPDDQNIQISRDSKSDPLYITDNDNISIGRENIENEENDTGSKIKRKRKHKSSNTDVDSDVDYESIKDVSEDLDFNIPLEDEEDELTEEATKRLYNLKVKLMHEVPIQHTIEHTTGSKILTKQEKELFLKYASLKSGVFTPSEDKIIIDNWKKFCKVHNWNFKCVHPFIQMKYVGKFYIRSMEERQKFTQFLANGLPRRTLYSVLNRFKYLFGNHEKSFQRYTSAEDETILSYVNNKQNRKRLRRFSELSKILGRSSHSIWTRYQRLERMHKKNKEQLPKITWSLFLIEKFIKTFMSVTLCDNIEDLKDAIIPKVVWQRLEKKIGINHNTLRKFWTYKLHMQLFCPERIYLNDIKIKLIEYVYVKGISNNREIIWSKVAKYFDGITTAFLCRTFSNLVKEASQKINTKEFLEIIEYLYNEKIQNIKDEVTDKFLPRLSCNNGKVEIIAEDLNEDTSME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01420219;
- 90% Identity
- iTF_01420219; iTF_01419581; iTF_01420875;
- 80% Identity
- -