Tcar006657.1
Basic Information
- Insect
- Tetragonula carbonaria
- Gene Symbol
- RERE
- Assembly
- GCA_010645115.1
- Location
- WIUU01012013.1:740-6666[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-08 4.3e-05 24.1 0.2 2 45 129 173 128 174 0.88 2 2 2.2 3e+03 -1.0 0.0 23 36 717 730 713 731 0.88
Sequence Information
- Coding Sequence
- atgTCTGCCGGCACCCAGGGCGAGATTCGGGTTGGCCCTTCGCACCAGGAATTGGTTTCTTGTCAGGCCCGTTTGCCTGAGTATCGGCCGGGTATACCTCCGGGAGAGCTGCTTCCTGATCCAGAGTTTTCCAAAGAACGAGAAGAGCTAAGATGGATTCCAGCTATGGCATTAGACGGGGATCTTCTGATGTATTTAAGGGCAGCTCGATCTATGGCTGCGTTTGCTGGTATGTGTGATGGAGGATCCCCGGATGACGGTTGTGTGGCTGCTTCCCGTGACGATACGACTATCAATGCTCTGGATATTTTACACGATTCTGGCTATGACCCAGGAAGAGCATTGCAAGCTTTGGTTAAATGTCCTGTACCTAAAGGCATCGATAAAAAATGGTCCGAGGAGGAAACTAAACGCTTCGTCAAAGGTCTTCGACAATTtgggaaaaatttttcaaggatTAGAAAGGATCTCTTACCTCATAAAGACACGCCGGAATTGGTTGAATTCTACTATTTATGGAAGAAAACACCAGGGGCGAATAATAACCGACCTCATCGAAGAAGACGACAGGGCTCACTTAGGAGGATTCGTAATACGCGGAACTCGCGTGCTGGTACTCCTAAAGAAGAGGTACCAACTGCTCCTAAAGATACTCCGCCAACTAGCGTCAATCAAAAGGAGCCTGTTTCAGAACCGGAAACTATACCTGTTGGGACACCCGCCAGCAATAACCCTGGTGGAGAAATTAGTTCCGTGACAGAAGACGATAATTCAGAAGAAGATAGTGACTCCAGAGATACAAATACTAACGGGACAACGCATGCGTGCCACCATTGTTTTTCGTCTAATTCGAAGGATTATCAGATAGCTGGCAAAGATAGGTTATTGCTTTGTACGGAATGCAGAACACATTTGAAGAAGACGGGAGAATTACCGCCTGCACCACCGTATCTATTCCGCCCTGTGCCTGCGGAATCACCAGATAGCCCAGGGAGAATGCGTACAAGAAACAAGGCCAAAGAAACGCCTAGACCTGCGAGACCTCGACGTACAGGTGGAACTGATACTCCAGACCAGGAaaaacaacagcaacagctACAAACGCCAGATaagagtaaaaagaaatctagTAAACCAGAGACACCAAAGAAAGGTCAGAAACGACCTCAAGCGGATGAAATAGATGAGGACAAAGAGTCTCAAAAGCGGAAACGTCCTGGTGAACGTCCTGAGAGTCCCTCGGAATCTCTCACAACTGATAGCAACTCTCTCATGGATGAACctgagagagaaggagaaggtgatacgaatgaaaatcaacCTACTCCGGTTACAGTGCCAACTGAGGAACCTGTTAGTCCAGCAGTAACTACACCAGAAGAGCCTTCTGAACCAACTCCAGTTTCTACCCCCGTACCAATACCCATACAGACATTACCAATTTCTGTTCCTGTTATCCATACTTTAGAAAAGAAACCGTTGCTAGAAGAACAAGTAGAAACGAAGGATCAAACAGAAGATGTACCTTTAGCTATTAATCAGCCATTAAAATTGGAACCTATGCCGATAGAACCAGCCATGTCGCCATCTAACGAAGATATGAAAGAGTCCGAACAGCAGCTGAACTTAACTACATCGCAGTCATTAAATATGAACGATATGAGTCAAAATATACCTCGTAATTTGTCACAGTCGATACAGAACAATGGTATTTGTGCGTCAACTGGTTCACAAGGCATACAGAACTCACAGATCATGTCACCGACGCACCAAGGACTGCCACTTAATATGCAATATACATCTAATGTACCTCCTGTTCAGAATGTACCGCAAAACTTATCGCAGAATATGCAAATGCCGCCGAATATACCGCAGAATATGTCAAATGCGCAAAATATGGGACCAACGCAAAATCTTCGAACACACGGTGAAAATCTATCAAATACTCAAAATATGCCTCAAAACATACCGGGACCACCATTGAACCTCAATATCTCGCAAAACATACCAACAAACATGACACAGATGCCTCAGATGCCGAATTCGCCACAACCACTTGGCTTAACCGTGATGTCTACTGAAAACAGAATGTCCGAACGAATTTCCGATGAGAGGTTACCTTCAGAACGAATTAGAGATAGTAGGATACCTGATAGAATATCTGAAAGGATACcagaaagaacagaaaataaCGAGTCTGAACGAAACGAGTCAAGCAATTTGTTCCAACCTATTCAGTCAAGTGGAATGTTGTCCATGGAAAAACCCTCTTCGATGTATAATTTGGCTAGCACGCCACCAATGGAAcctcaaaatttaaaaatcaaacaagAGATCATTCCTCCTGAACCAGATCCTCTTCAAAGTTTAAAAGAAGTCAAAGTTCCTGGTTTTCAGTCTGGTTTTCCTGGCCCGAGTTTAGAGAATATTAAGAAAGATCCAGATAGTTCCAGTAAACCACCAACACCAAGCAAACACTCCATACCAAGTAGTCAACCTGTTGCTCAAATACAATCTGTTGCAGCTTCTCCAACACCGACTCTTCCACCACCACCTACTTCTATTCCTCAGCCTGTAATGCATCCAGCCCAACAACCGAGTCCTCATATGGCTCATCCATTCCATCCACACCATCCCTTGATGCATCACTCATTATTTACCGCAATGCATCCATATCATCCTCATGCTTATCCAGGTTATGCTCCCGTTGGAGCTTATCCCTCGTTCCCACCATATCCTTATGGTCCAGTCCCCCATGCAATTCCGCCTCCATCTCCACAGAGGAGTCAAGAAAGTACAACAATGATGACAGCGCATCATTCAAGCACGAGTTCCAGTGTGACAAcaagagaagaaggagagaatcTCATCGCTACGCATCATCACTCATCTACAATGCATCAAGCCACAGCGTTGCACCACGATAAACTGTTAACCATTTCTTCTCATAGTTCTCATAGTCATTCTTCGTCGCATAGTTCACATAATACTCAGCGCAAACCATCATTAGTATCAGCCACGAGTCTAACATCTGGTAGTTCTGCGCATCATCACCATAGACCACCGCAATCCCAACCTTCAGTCGCTCCAGAACCTAAAATAGAACCTGATTTGGTAgaacaagaacaagaagaGCTACCAAGTCCACGAGGTCCATCTCCAGAACCTCGAATTGAGGATTCTGAATGTCACAGATCACAGTCTGCCATTTTTTTACGACATTGGAACCGAGGTGAGAACAATTCCTGTACCAGGACAGATCTAATGTTCAAACCTGTCCCAGATTCAAAGTTAGCaagaaaacgagaggaaagaTCGAGGAAGCAGGctgagagggaaagagaggaacGTGATAGAGTTGCCGCGCAACAAGCTAGGAAAATGACCACGCCTGAGAAGCAACCAGAAACATGTAAGCCGCCTAGTCGAGGACCTCTCGAGCCCGTTGTATCTCCTTATGATAGATACGCCGCAAGACCGGGATCTTATGCTGATACTCCTGCTTTGAGACAATTGTCCGAATACGCCCGACCACATGCTGCTTTCTCACCTGCGAGGCATCCAGCGCCACCAGATCCAATGTTACATTACATGTATAGCCCTGCTGCCCGAGAACGCTTAGAATTGGAACATTTAGAACGTGagaaaagagaacgagagattAGAGAGTTACGTGAACGAGAATTAAACGATCGATTGAAAGAGGAACTTCTAAAGGGAACACCTAGACCAATGCCAGCACCAGTGGATCCACATTGGCTAGAAATTCATCGACGTTACGCAGCCGCAGGACTTGCTCCTGGACCGTCGGGACCTCCTCAGGCTTTACACCAATTTGGTCTCTATGGAGCTCCACCTGGACCCAGTCAATTGGAAAGAGAACGTTTAGAAAGACTAGGTAACGTTAATTCTCTATCAGTAAGGGCCtatcttttttcccc
- Protein Sequence
- MSAGTQGEIRVGPSHQELVSCQARLPEYRPGIPPGELLPDPEFSKEREELRWIPAMALDGDLLMYLRAARSMAAFAGMCDGGSPDDGCVAASRDDTTINALDILHDSGYDPGRALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFSRIRKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRAGTPKEEVPTAPKDTPPTSVNQKEPVSEPETIPVGTPASNNPGGEISSVTEDDNSEEDSDSRDTNTNGTTHACHHCFSSNSKDYQIAGKDRLLLCTECRTHLKKTGELPPAPPYLFRPVPAESPDSPGRMRTRNKAKETPRPARPRRTGGTDTPDQEKQQQQLQTPDKSKKKSSKPETPKKGQKRPQADEIDEDKESQKRKRPGERPESPSESLTTDSNSLMDEPEREGEGDTNENQPTPVTVPTEEPVSPAVTTPEEPSEPTPVSTPVPIPIQTLPISVPVIHTLEKKPLLEEQVETKDQTEDVPLAINQPLKLEPMPIEPAMSPSNEDMKESEQQLNLTTSQSLNMNDMSQNIPRNLSQSIQNNGICASTGSQGIQNSQIMSPTHQGLPLNMQYTSNVPPVQNVPQNLSQNMQMPPNIPQNMSNAQNMGPTQNLRTHGENLSNTQNMPQNIPGPPLNLNISQNIPTNMTQMPQMPNSPQPLGLTVMSTENRMSERISDERLPSERIRDSRIPDRISERIPERTENNESERNESSNLFQPIQSSGMLSMEKPSSMYNLASTPPMEPQNLKIKQEIIPPEPDPLQSLKEVKVPGFQSGFPGPSLENIKKDPDSSSKPPTPSKHSIPSSQPVAQIQSVAASPTPTLPPPPTSIPQPVMHPAQQPSPHMAHPFHPHHPLMHHSLFTAMHPYHPHAYPGYAPVGAYPSFPPYPYGPVPHAIPPPSPQRSQESTTMMTAHHSSTSSSVTTREEGENLIATHHHSSTMHQATALHHDKLLTISSHSSHSHSSSHSSHNTQRKPSLVSATSLTSGSSAHHHHRPPQSQPSVAPEPKIEPDLVEQEQEELPSPRGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDSKLARKREERSRKQAEREREERDRVAAQQARKMTTPEKQPETCKPPSRGPLEPVVSPYDRYAARPGSYADTPALRQLSEYARPHAAFSPARHPAPPDPMLHYMYSPAARERLELEHLEREKREREIRELRERELNDRLKEELLKGTPRPMPAPVDPHWLEIHRRYAAAGLAPGPSGPPQALHQFGLYGAPPGPSQLERERLERLGNVNSLSVRAYLFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00633569;
- 90% Identity
- iTF_00226534;
- 80% Identity
- -