Tcar008170.1
Basic Information
- Insect
- Tetragonula carbonaria
- Gene Symbol
- kn
- Assembly
- GCA_010645115.1
- Location
- WIUU01009428.1:301-8631[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-115 2.7e-111 373.3 0.0 209 455 15 259 11 266 0.90 2 2 0.051 7e+02 -1.2 11.1 443 515 282 354 269 371 0.67
Sequence Information
- Coding Sequence
- atgaaagaatttagaggtttgattttttttttagtaaatgaGAAAGTGGTCATTTCCACGCAAGTAGGAGTAGAGGGACCACTGCTGGCCGTCTCGGACAACATGTTCGTTCACAACAACAGCAAACACGGGCGTAGAACGAAACGATTGGATCCCAGTGATCCCGGAGAATACAACAGTCTCTACACGCCTGTACCGCTTCAAACGCCGTGTATAAAGGCGATATCGCCGAACGAAGGCTGGACATCCGGTGGATCCACGGTAATAATCATTGGAGAGAATTTCTTCGATGGACTTCAAGTCGTTTTCGGCTCGATGCTGGTTTGGAGCGAGCTAATTACACCGAACGCAATTAGAGTACAAACTCCACCACGGCAGATACCAGGCGTCGTCGAGGTCACGTTGTCCTATAAAACTAAACAATTCTGCAAAGGAGCACCCGGTAGATTTGTTTATGTTTCGTTAAACGAACCAACGATCGACTACGGCTTCCAAAGATTACAGAAACTTATTCCTCGGCACCCAGGGGATCCCGAGAAATTACCAAAAGAGATCATACTGAAAAGGGCAGCGGATCTTGCAGAAGCATTGTACAGTATGCCGAGAAGCGGAAACGCTGGAATCACGGGAGCGCCAAGGAGTCCGGGATCGGGTCATCCACCTGCGCCGCCGACCTCCAGTTCGGCAACAGCGTTCAACTCGTATACGGGACAACTGGCAGTGACGGTGCAAGAAAACGGTAGCGCGACGAAGTGGACAGACGACGGTAGTTCGGTGACGACAGGAGCCGGTGCTGGAGGCggaggcggcggcggcggtggtaGCGTCGGAGGAAGCGTCGGTGGTAGCGCCGACGCCTACAGGCAAAGCAGCAGCGCGAGTCCACGTGGGGTCGTGACCGGTGGTGGTTATTGCGGAAGTTCGGCTAGCACACCTCACAGTCACAGCACGAACGGAAGTTACTCGGTGGCAAATCCTTATACCGGTAGTCCAACACTTTATACGTCGCGACTAGGAGAGGTGGTTGGTTCGCCGTTCAACATGAATCCATTTATGTTGCCCACCTGCAGTCAAGGATATTCAAACGCCGCCAGCCCATTGCTCTCGTCGAACGGCAAATAG
- Protein Sequence
- MKEFRGLIFFLVNEKVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRTKRLDPSDPGEYNSLYTPVPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSELITPNAIRVQTPPRQIPGVVEVTLSYKTKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSGNAGITGAPRSPGSGHPPAPPTSSSATAFNSYTGQLAVTVQENGSATKWTDDGSSVTTGAGAGGGGGGGGGSVGGSVGGSADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSRLGEVVGSPFNMNPFMLPTCSQGYSNAASPLLSSNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070145;
- 90% Identity
- iTF_00360699;
- 80% Identity
- -