Tang012059.1
Basic Information
- Insect
- Tetragonisca angustula
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_036937485.2
- Location
- JAWNGG010000119.1:165536-168267[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.6 1.3e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 19 0.22 1.8e+03 -0.5 0.8 4 10 161 167 160 167 0.95 3 19 8.3e-08 0.00068 20.0 15.1 1 18 175 191 175 192 0.98 4 19 1.8e-07 0.0015 18.9 12.8 4 19 231 246 229 246 0.94 5 19 0.43 3.6e+03 -1.4 0.3 5 10 270 275 270 277 0.90 6 19 0.023 1.9e+02 2.6 8.7 1 18 281 299 281 300 0.88 7 19 6.4e-05 0.53 10.8 9.0 1 18 336 353 336 354 0.97 8 19 0.0021 17 6.0 8.3 1 12 388 399 388 399 0.94 9 19 0.7 5.7e+03 -2.1 1.0 6 10 409 413 408 413 0.92 10 19 1.2e-07 0.00095 19.6 12.0 1 18 419 436 419 437 0.92 11 19 1.9 1.6e+04 -3.5 1.0 6 10 465 469 464 469 0.77 12 19 0.00036 3 8.4 6.3 9 19 484 494 482 494 0.91 13 19 0.0038 31 5.2 6.2 1 12 504 514 504 514 0.95 14 19 0.94 7.7e+03 -2.5 5.8 14 19 546 551 546 551 0.90 15 19 0.0034 28 5.3 8.5 1 12 587 598 577 598 0.80 16 19 3 2.5e+04 -5.7 2.7 6 7 614 615 610 618 0.50 17 19 0.00075 6.1 7.4 13.1 3 19 627 643 626 643 0.93 18 19 4.7e-07 0.0038 17.6 11.8 1 16 688 702 688 708 0.86 19 19 1.1 8.9e+03 -2.7 0.4 5 10 737 742 737 742 0.92
Sequence Information
- Coding Sequence
- atgcAGAAATTCAAACGAGCTCAAGCAGAAAATAAACTAGCAATTAACAAGCATTTAGAAGCAAATGCCCATTTGGAATCCTCCAGTGAGGATGAAAATGACAGGGGCGAGGAGAATATGCAAAATGTTATTGGAAAGATACTGTCCGCCTATCGAGGCGAGGAGGCAGATGCAGAAAAGATTTTGTCATATTTGATTAATATCTTCCAATCTGGCAATGCTGTTTGTTTAATATGTATCTCGACTGTGAAAAGAGCAGATCCGATTTGGAATTGCAACAAATGTTTTGCTTTTCTACATCTGTCTTGCATTTCGCGTTGGATACAGGATAGTGTGAATGTTAAACGTGAGAAGGGTATCGAGCTAACATGGGCGTgTCCAAAATGTCGTACAGAGTACAAGGAAGATGACGGTCCTCGTAAGTATAAGTGCTTCTGCAAAAAAACCATAGATCCTCCATACAGTCCATGGAACATCCCGCATTCCTGTGGAGAGACATGCGACAAACTGTTGCAACCAGAGTGCGGCCATAAATGTGTTTTACTTTGTCATCCTGGGCCATGTCCTCCCTGTGCAAAGACAGTATTCATTAAATGCTACTGTGGCAAACAAGCACCTCAACAACGACGATGTAACGCCAAAAATTGGAGCTGCGGCACTGTATGCAACAAAAAGTATGAATCATGTTTGCACGCTTGCAAGGAGGTGTGTCATTCAGGGAAGTGCCCACCTTGTTCAGAGATATTGTCGTTAGAATGCCACTGCAAGAGTAACAAGGAATTAAAGCAATGTTCAGAAGGTCCATGGACGTGCGACAAACCTTGTGGCAGAACTTTCTCTTGCAATGTTCACACCTGCAAAGGTAAATGCCATTTAGACGACGACTGCGGAATCTGTGCACTGGAGAAGAACAGAACATGCCCATGTGGAAAGAAACGTTACACCGTTTCATGCAACCAGGAACAATTGCCAACGTGCGGAGACACATGTGGAAAGTTATTGAATTGCGGCTCGCATTACTGCAGTATGAGATGTCATACGGATCGTTGTGGACAGTGTTTGGAAGTAGTCACAAAGTGGTGTAGATGCGGCAGCTACAGAAAGGAGGTCGCTTGTGGCAAAGAGTTCCATTGCAACAAGAAATGCGTGCAGATGCGTCTGTGCGGAAGGCATTCGTGCAACAAAAAATGCTGCGACTGTTTGATCAAGAATACGTACAACGCTTGCGAGAAGGTATGCGACAACACTCTAAATTGTCGCAAGCACAAATGTGCCGCCCCTTGTCACAGCGGTCCCTGTTACCCATGCGCACGGACCGACGTTATTCAATGTAGATGCGGACACAACAAGATAACGGTGCCGTGTGGTACGAAAAGAATCAAGCCGCCACCTTGCAACAGGCCGTGCAAAATACCGCCGATCTGCCATCACCCTAAACGAGAAATTCATAAATGTCACCAAGGCTACTGTCCGCCCTGTAAAAAGATATGTGACTTGGTATACAAACGATGTGGCCATTCTTGTGTCGCTGTTTGTCATACAAAAGTTTGGATGAAGGTAGGCAAAAGTGACGTGAAGGTACAACCAGCAGGGCCATGGGACATTCAGAAGGAAACTATGCAGTTGAAAACGTTGCCATGCCCGCCGTGTAAAGTCTCTGTGCCAGTTATATGCTTAGGAGGACACGAGACACGTTCGTGGGCCTGTCACGAGGCCAAGCCTACCTCCTGTGGGAGATTGTGTGGAAGAACGTTACCGTGCAAAAATCACACGTGCGAATTGATTTGTCATAAAGTACTATCTTCCGAAGAAACTAAGAATGGCACTCCGTGTATGGACTGTGAGAGTTCCTGTCTACTTCCACGGCCGGCAGGTTGCATGCATTTATGCCCCAAACTTTGTCATCCCGCGCCGTGTAATCCCTGCAAGCAGATAGTTAAAACTTCGTGTCACTGCGGTATAAGTACCATATATCGTAGATGCTTCGAATTAACGTCGGCCACAACTGAGAAACGCAATGAATTGCTCAAGTGCGGGAATCAATGCCCTAAAAATTATCCATGTGGACATCGATGCGCCAACGTGTGTCACCCAGGGCCGTGCAGAAACGAGAAGGAGTGCAGCAAGAAGATGAAGTTGTTTTGCGAGTGCAGACGGATTAAGAAAGAATTTGTTTGCTCTGTGGTGCAGAAAGAGGGAATTTCGATAAAGTGCGACGATGTTTGCACGAGACTGAAGAACGAAAGGCGCCAGGTCGAAGCTGCCTTGCTGGAGCAGAAACGGCGAGCGGAGGAGATGCGCAATCAGCAAGAGATAGAGAAGTTCGAGCGAAAGTTTAAACCCCGTCGTAAGGGGAAAGACAAATCCGATAAGAAACTGTCGCAGAACGAGACGCGCGGTAACTACTGGAAATATTGGATTTTAAGTGTCTTGATATGTTTAATAGgcgttgtaatattttatgcaaCCATCGGACAGTCGTGA
- Protein Sequence
- MQKFKRAQAENKLAINKHLEANAHLESSSEDENDRGEENMQNVIGKILSAYRGEEADAEKILSYLINIFQSGNAVCLICISTVKRADPIWNCNKCFAFLHLSCISRWIQDSVNVKREKGIELTWACPKCRTEYKEDDGPRKYKCFCKKTIDPPYSPWNIPHSCGETCDKLLQPECGHKCVLLCHPGPCPPCAKTVFIKCYCGKQAPQQRRCNAKNWSCGTVCNKKYESCLHACKEVCHSGKCPPCSEILSLECHCKSNKELKQCSEGPWTCDKPCGRTFSCNVHTCKGKCHLDDDCGICALEKNRTCPCGKKRYTVSCNQEQLPTCGDTCGKLLNCGSHYCSMRCHTDRCGQCLEVVTKWCRCGSYRKEVACGKEFHCNKKCVQMRLCGRHSCNKKCCDCLIKNTYNACEKVCDNTLNCRKHKCAAPCHSGPCYPCARTDVIQCRCGHNKITVPCGTKRIKPPPCNRPCKIPPICHHPKREIHKCHQGYCPPCKKICDLVYKRCGHSCVAVCHTKVWMKVGKSDVKVQPAGPWDIQKETMQLKTLPCPPCKVSVPVICLGGHETRSWACHEAKPTSCGRLCGRTLPCKNHTCELICHKVLSSEETKNGTPCMDCESSCLLPRPAGCMHLCPKLCHPAPCNPCKQIVKTSCHCGISTIYRRCFELTSATTEKRNELLKCGNQCPKNYPCGHRCANVCHPGPCRNEKECSKKMKLFCECRRIKKEFVCSVVQKEGISIKCDDVCTRLKNERRQVEAALLEQKRRAEEMRNQQEIEKFERKFKPRRKGKDKSDKKLSQNETRGNYWKYWILSVLICLIGVVIFYATIGQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00983909;
- 90% Identity
- iTF_01420631;
- 80% Identity
- -