Tang012646.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetragonisca angustula
Gene Symbol
-
Assembly
GCA_036937485.2
Location
JAWNGG010000127.1:401779-404490[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.0045 0.44 11.6 0.6 1 23 473 496 473 496 0.96
2 9 9.1e-06 0.00089 20.0 0.5 1 23 502 524 502 524 0.99
3 9 1.7e-07 1.7e-05 25.5 0.3 1 23 530 552 530 552 0.99
4 9 0.33 32 5.7 1.8 1 23 558 580 558 580 0.98
5 9 3.9e-06 0.00038 21.2 0.2 1 20 586 605 586 606 0.96
6 9 0.044 4.3 8.4 2.4 1 23 615 635 615 635 0.94
7 9 1.9e-06 0.00019 22.2 0.5 3 23 643 663 642 663 0.98
8 9 0.00019 0.019 15.9 1.4 1 23 669 691 669 691 0.98
9 9 0.0049 0.48 11.4 2.7 1 21 697 717 697 720 0.96

Sequence Information

Coding Sequence
atggCCACACTCGATatgcaacaaaatattttaaatcaagtAGCTGGAAGTGAACAACAGCAGCAAGAAGAAGTTCAATTAACCGAATTATTACCGGTGAAGCAATCACAAATaagagagaatgaaatttttaagcaTATGGACACAAATACCGATGCGACCGACGCTTTGAAGATACTCCAAAGTTTCACCATTACCGACAATTGTTATAACGATAGTGAACATGAACTTCACTCGAGAGATTTGTCTCCGTGCAGTAAAATCGGACAAATTGATGAGGAGCAGCAAGAGAATGGCAGACAATGGCGACAGgataaaaaaagaggaaggaatAGCATCCGAAGATTCGAAAATGAATcaaaaatgcagaaaaaaatgtataaatatgttaataaacaATCGATGATCGATCGTGTAGTGAAATCTacgaaaaagagaacgatCATCTACACggtggaaaataataaagatgaAGGAAATGGCGACGAATGGATGGGAAATCataaattcgaagaaaacgcatttttcgaagaaaagaaaggaaactaCATATCGAAGAATGACGAACAGATAGGGTCaacgatttatttcgatcCTGACAAAAATAATGATGACATTTACTTGATTCATCGTGAATTGGTAAACGAGGGACAAGGACGGAAAACAAACTCAAGAAGCAACGTAGAgacaatatatgaaaataaggACTATGCCAAGACTACCGACGGAGCTTTGCTCGATCGAATAGCTTCGAGGACATTGATCGAAAAGAACGTTGATGAAATCGGAAAACGATTCGATGCCATTGCTACTGATCTATCAAACTCAAAATTGATACTTGAGAATTCGGCAGAGCAACCAAAACTCAACTTTCGCATAACAACGACGAGTTATCTTgtggaaaacaaaaataataatagcacAGTtcgaattgaagaaaattcaacAAGTTCATTATTTGGACCAAATACCAGTAATAATATAGTCATTGTCGAATCACcatcgtcgttgtcgtcggcggtatcgtcatcgtcatcgtcatcgtcatcgtcgtcgttgtcgtcttcgtcttcgtcttcgtcttcgtcttcgtcttcgtcttcgtcttcgtcatcgtcatcgtcatcgatATCGACATCGACATCgacatcgtcatcgtcatcgtcatcgtcatcgtcgtcgtcgtcgtcgtcgtcgttgttgtcatcgtcgtcgtcatcaccgccgtcctcgtcgtcgtcgtcgtcatgtTCATCATCTtcaccatcatcatcattatcgtTGTCATTATCATCAACAACGTTGCCGCcatattcgaaagaaaaggataTGTGCGGCAGTGAAGATGGACGAGGTGAAGATGAAAATTCTACCATGCACGGTATCAAAGCTAAACAAGAAAATCAgcagaaaaaatattgttgtgtAGTGTGTGAGGCGCGATTTAAAGGTAGCGGAGGTCTTCGCAATCACTATAAAATCGTACACGGAGCGGGACCAATCTTCAAATGCGATGAATGTGGAAAAGAATTCCCGTTAAAGGAAAGATTAAAATTGCACGTGAGAACGCACACTGGATTCAAGCCGTATAAATGTCCAGAATGTGACAAGAGTTTCGCTAGAGGAGGGCAACTAGTGCAGCATCGGCGTACTCATAGCCAGGTAAAACCGTATCATTGTGGTTTGTGTTCAGGGACGTTTACCTGCGCTGCGAATTTGGCGTTACATGTGAAACGACACAACGGACAAAAGGATCACAAATGTGAAATTTGTGGTCGCGCGTTCGTTCGGCGTGATGCGCTTAAAAAACATTTAGAATGCCTTCACAGAGACGTGAAGTCTTTCCTCTGTGTAATCTGCAACAAGACTTTCAAAGGTCATCTACCTCAACATATGAGAACGCATGCGCGTGATCGGCCACATGGTTGTGCCACGTGTGGTCAAAGGTTTGCTCAAAAATCTCAATTGACTGTCCATCAGAGAACGCATTCTGGGCAAAGACCGTTCAGGTGTCTGGTATGTTGGCAAGCATTTGCACATTCAACAGCACTCAAACTCCATACGAGAAGACATACTGGTGAGAGGCCGTTTAAGTGTGTCGAGTGCAATGCCGGTTTCACGCAACTACCCCATTGGAAAAAACATATGAAATGTATCCATGGCAGAAACGAACCATACGCTTGCAAAAAGTGTACAAGTTTCttcagaattaaaaatgatctAGAATGTCATGAAAAAACTTGTCACCCTGAATCCGAGACCGAACATGATGTTTCCAGTGCTCGAACTACAGATTTGATAACAAACACGACGATCATGCCGACATCAATTTCGATGACCTTACAACCGACAGCATCCCTGCTTtccaatgaaataattaacgataaattCTCACCATCgcctacaaaatataaaataatgactGTCGAAAGGATGAGATTGTTACTCGCTGTACTTCTGAAAAGAATCAGCAAACAAGAAAGACTCGACGAGTTAGGTTTTGGTAAACGACTAATTGATGAGGTTCTTTACGATTCTCTGATATCTGCCGGTAAAGATCCAGTGACAAACAATGGTCATAACGAACTCGAAACACTCACTAagaatcttgaaatatttcttaaatggACCGTACCTAAAGAACATTGGGAACATTTTCGCAAGTTAAACAAGACTCCCGAAGATATTTTAGAGACACTGACTGCTACTTAA
Protein Sequence
MATLDMQQNILNQVAGSEQQQQEEVQLTELLPVKQSQIRENEIFKHMDTNTDATDALKILQSFTITDNCYNDSEHELHSRDLSPCSKIGQIDEEQQENGRQWRQDKKRGRNSIRRFENESKMQKKMYKYVNKQSMIDRVVKSTKKRTIIYTVENNKDEGNGDEWMGNHKFEENAFFEEKKGNYISKNDEQIGSTIYFDPDKNNDDIYLIHRELVNEGQGRKTNSRSNVETIYENKDYAKTTDGALLDRIASRTLIEKNVDEIGKRFDAIATDLSNSKLILENSAEQPKLNFRITTTSYLVENKNNNSTVRIEENSTSSLFGPNTSNNIVIVESPSSLSSAVSSSSSSSSSSSLSSSSSSSSSSSSSSSSSSSSSSSISTSTSTSSSSSSSSSSSSSSSSLLSSSSSSPPSSSSSSSCSSSSPSSSLSLSLSSTTLPPYSKEKDMCGSEDGRGEDENSTMHGIKAKQENQQKKYCCVVCEARFKGSGGLRNHYKIVHGAGPIFKCDECGKEFPLKERLKLHVRTHTGFKPYKCPECDKSFARGGQLVQHRRTHSQVKPYHCGLCSGTFTCAANLALHVKRHNGQKDHKCEICGRAFVRRDALKKHLECLHRDVKSFLCVICNKTFKGHLPQHMRTHARDRPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLHTRRHTGERPFKCVECNAGFTQLPHWKKHMKCIHGRNEPYACKKCTSFFRIKNDLECHEKTCHPESETEHDVSSARTTDLITNTTIMPTSISMTLQPTASLLSNEIINDKFSPSPTKYKIMTVERMRLLLAVLLKRISKQERLDELGFGKRLIDEVLYDSLISAGKDPVTNNGHNELETLTKNLEIFLKWTVPKEHWEHFRKLNKTPEDILETLTAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00983163;
90% Identity
iTF_00734124;
80% Identity
-