Basic Information

Insect: Tetragonisca angustula
Gene Symbol: -
Assembly: GCA_036937485.2
Location: JAWNGG010000129.1:340157-343996[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.11 11 7.2 7.6 1 23 33 56 33 56 0.96

2 19 3.8e-06 0.00037 21.2 0.3 1 23 62 84 62 84 0.97

3 19 2.3e-05 0.0023 18.7 1.4 1 23 90 112 90 112 0.97

4 19 0.00082 0.08 13.9 0.4 1 23 118 140 118 140 0.98

5 19 4.1e-07 4e-05 24.3 4.2 1 23 146 169 146 169 0.98

6 19 0.0018 0.18 12.8 2.1 1 23 187 210 187 210 0.94

7 19 0.0053 0.52 11.3 1.1 3 23 221 241 219 241 0.95

8 19 9.1e-05 0.0089 16.9 0.2 2 23 248 269 247 269 0.98

9 19 0.00032 0.031 15.2 1.1 3 20 277 294 275 296 0.94

10 19 0.12 12 7.0 0.7 2 23 331 353 330 353 0.96

11 19 1.3e-05 0.0013 19.5 0.9 1 23 359 382 359 382 0.97

12 19 1.6 1.6e+02 3.5 0.2 2 23 388 409 387 410 0.92

13 19 3.1e-05 0.003 18.4 0.5 1 23 415 437 415 437 0.98

14 19 0.0013 0.13 13.2 1.4 1 23 443 466 443 466 0.95

15 19 0.00011 0.011 16.6 1.9 1 23 490 513 490 513 0.93

16 19 0.0024 0.23 12.4 0.1 1 23 524 546 524 546 0.95

17 19 0.0093 0.9 10.6 3.6 1 23 552 574 552 574 0.94

18 19 5.7e-07 5.6e-05 23.8 1.1 1 23 580 602 580 602 0.98

19 19 2e-05 0.0019 19.0 0.1 1 21 608 628 608 629 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.11	11	7.2	7.6	1	23	33	56	33	56	0.96
2	19	3.8e-06	0.00037	21.2	0.3	1	23	62	84	62	84	0.97
3	19	2.3e-05	0.0023	18.7	1.4	1	23	90	112	90	112	0.97
4	19	0.00082	0.08	13.9	0.4	1	23	118	140	118	140	0.98
5	19	4.1e-07	4e-05	24.3	4.2	1	23	146	169	146	169	0.98
6	19	0.0018	0.18	12.8	2.1	1	23	187	210	187	210	0.94
7	19	0.0053	0.52	11.3	1.1	3	23	221	241	219	241	0.95
8	19	9.1e-05	0.0089	16.9	0.2	2	23	248	269	247	269	0.98
9	19	0.00032	0.031	15.2	1.1	3	20	277	294	275	296	0.94
10	19	0.12	12	7.0	0.7	2	23	331	353	330	353	0.96
11	19	1.3e-05	0.0013	19.5	0.9	1	23	359	382	359	382	0.97
12	19	1.6	1.6e+02	3.5	0.2	2	23	388	409	387	410	0.92
13	19	3.1e-05	0.003	18.4	0.5	1	23	415	437	415	437	0.98
14	19	0.0013	0.13	13.2	1.4	1	23	443	466	443	466	0.95
15	19	0.00011	0.011	16.6	1.9	1	23	490	513	490	513	0.93
16	19	0.0024	0.23	12.4	0.1	1	23	524	546	524	546	0.95
17	19	0.0093	0.9	10.6	3.6	1	23	552	574	552	574	0.94
18	19	5.7e-07	5.6e-05	23.8	1.1	1	23	580	602	580	602	0.98
19	19	2e-05	0.0019	19.0	0.1	1	21	608	628	608	629	0.96

Sequence Information

Coding Sequence: ATGGTATTTCAATCTCTTGCGCGTCTCGAGGAAAGAAACGTCGTAACGAGTAATTTGTATTCATCAAGGCCGCGAAGAATAACCTCACGAGCGGTTCACGAGTGCGTGAAGTGCGGCGCCTGTTTCTGCCACACGAGGAAGCTGGTTGAACACCTGAAGAATCTGCACGGCATCGACAGAGCGTTCAGCTGCGACGAGTGCGGCAAGACGTTCCGAAGTCCCATGAACATAGCGCGGCACAAGCTGATTCACACCGGCTCGAAGAGATTCGCCTGCGACCTGTGCGACTACCGATCGAACCAGAAGTCGAATCTCGAGAGCCACCGTCGACGGCACACCAAGGACTACTCGTTCAGATGCGAACGCTGCGGGAAGGGCTTCGTCCTCAGAACCGAATACCTGGACCACGTGAACAGCCACACGAGAAAGCAGCTGTATCGATGCGATCATTGCGACAAGTCCTATCCTTACAAGAAGAACCTGACCAATCACCTGAGAACGCAGCACGCTGGCGTTCTGCCGCCGGAAGCGAGAAACGACGGGCAGAAGAGACACAGGCACGCGTGCACGATTTGCCTGGAAGGTTTCCAGCGGAAGTCGTTTCTGGAGAGACACTTGAAACAACGTCACGGACTGTCGAACGAAAGCGCCAGGCACCTGTGCGATCTGTGCGGCACGGTGTTGTCGTCGAAGAGGCGGCTGATGGTGCACAGACGGGGCCACGCGAACGAGAAGATCGTCAAGTGCGATTTATGCGACAAACAGTTCGCCAGCATGGAGAACCTCGGCGTTCATCGGCGAGTGCACACCGGCGAGAAACCGTACGGTTGCTCGCAGTGCGGGCGAAGGTTCACGCAGAGAACGTCACTGACCCTGCACCTTAGCCACTGGGGCAACGTTCGCGACGAGTTCAGCAGCTGCGAAGATTTCAGGATCAAGAGCGAGGACATTCTTCTCGATCCTGGACAAAAATTCGAGGGGAACGAGAAGGTCTGCGACCTTTGTCAGGAGAAGTTTCACTTTGTGACCAGATTGGTGGCACACCTGAGGATCGTTCACGGTATCCACAGGCCCTTCAAGTGTGTCACCTGCGGGAAGACGTATCCGCAGCAGTTCATGCTAAATGCCCACGTGAAGAAATCGCACACACCGAAAACGATGCCCTGCGGACAATGCAGTTTCATGGGTGTGAACGCCATCGACGTGGAGAGGCACGCGAAACGACACCATCGTGATGTGAAGTTCACCTGCGAGATCTGCAGCGAGAACTTCGTTGACAAGGATTCCTTGATGACTCACACGACCATGCACAACTTTATGCAGTTTCATCAGTGCAACGCTTGCGGCACTACGTTCGACGACGTGTACAGCCTGAAGGAGCACAATCGTTTGTACCACTACGATCCGACGGCGTTGATCCAAGAGAAGCTGGAGACGGAGTCGCCGCAGCAGGACACCGCGACGGAGCACAAATGCGACGTCTGTGGCAAGGCTTACAAGTACAAGTCGGTGTTGAAGCAGCACAAAGTGAAAGCCCACGGCGACGTGCCGAGCTACGAGAGGCGTCGTTATCTCTGCGCTCTCTGCGGCAAGGAGCTGAAAACGGCGAAGGGCCTGGAAATTCACAATCGGTCGCACACAGGCGAAAAACCGTACACCTGCGAGGTGTGCGGCAAGTGTTTCGCCTGCGAAACGCTGCTCAGGACTCACAACGTCACTCACACTGGCGAGAGGAAGTACTCCTGCGACCAATGCGGCAAAGCTTTCACGCAGAGGTCCACGTTGGTCGTTCACAAGCGTTATCACACCGGCGAACGACCGTACGTTTGCCCCCGGTGTGGAAAAGGCTTCGTCACCAGGACTGTTCTCAACACCCATATGAAATCCTGTCGTTAA
Protein Sequence: MVFQSLARLEERNVVTSNLYSSRPRRITSRAVHECVKCGACFCHTRKLVEHLKNLHGIDRAFSCDECGKTFRSPMNIARHKLIHTGSKRFACDLCDYRSNQKSNLESHRRRHTKDYSFRCERCGKGFVLRTEYLDHVNSHTRKQLYRCDHCDKSYPYKKNLTNHLRTQHAGVLPPEARNDGQKRHRHACTICLEGFQRKSFLERHLKQRHGLSNESARHLCDLCGTVLSSKRRLMVHRRGHANEKIVKCDLCDKQFASMENLGVHRRVHTGEKPYGCSQCGRRFTQRTSLTLHLSHWGNVRDEFSSCEDFRIKSEDILLDPGQKFEGNEKVCDLCQEKFHFVTRLVAHLRIVHGIHRPFKCVTCGKTYPQQFMLNAHVKKSHTPKTMPCGQCSFMGVNAIDVERHAKRHHRDVKFTCEICSENFVDKDSLMTHTTMHNFMQFHQCNACGTTFDDVYSLKEHNRLYHYDPTALIQEKLETESPQQDTATEHKCDVCGKAYKYKSVLKQHKVKAHGDVPSYERRRYLCALCGKELKTAKGLEIHNRSHTGEKPYTCEVCGKCFACETLLRTHNVTHTGERKYSCDQCGKAFTQRSTLVVHKRYHTGERPYVCPRCGKGFVTRTVLNTHMKSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00361060;
90% Identity: iTF_00983103;
80% Identity: -