Basic Information

Gene Symbol
KDM5A
Assembly
GCA_036937485.2
Location
JAWNGG010000153.1:419729-430213[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5e-26 1.4e-22 80.3 0.0 2 89 109 192 108 192 0.94
2 3 3.9 1.1e+04 -2.6 0.1 49 81 826 856 823 860 0.64
3 3 4.1 1.1e+04 -2.7 0.0 49 64 1036 1051 1033 1061 0.77

Sequence Information

Coding Sequence
ATGGTATCGAGGTTCGACACAAATTTTGGCTGTGAGAATTTTTTCGGGACTTATCGTTGCACCCAAGACATGGCTTGTGATCGTGGTGATTCGGACTTCGAGTTCATCATACCGCCAGAAGCGCCGGTCTTCGAACCAAGTACTGAAGAGTTTCACGACCCCCTTGGCTACATCGCGAAAATACGACCGATCGCAGAGAAGTCTGGCATTTGTAAGATCAAGCCGCCGCCTAATTGGCAGCCACCATTTGCTGTTGatgttgataaatttaaatttgttccaAGAATACAAAGACTAAACGAATTAGAGGCAAAAACAAGAATAAAACTTAATTTCTTGGATCAGATTGCAAAATTTTGGGAACTTCAAGGttcatctttaaaaattcctcTTGTTGAACGCAAAGCTCTTGATTTATATTCTCTGTATAAGATAGTTACTGATGAAggAGGAATTGAAACAGTAACAAAGGAAAGGAGATGggcaaaaattgcaaataaattaggTTATCCTTCTGGACGCAGTGTTGGAAGTATTCTAAAAAATCACTATGAACGTATTTTATACCCATTTGATGTTTTTAAACAAGGAAAGACATTGGCAGATATTAAAATTGAACCAGATTCTAATGTAACTGAGAAGAAAGATAGAGATTATAAACCACATGGAATTATATCTCGACAACAAATTAAACCCCCAgctgagaaattttcacgtcgGTCAAAAAGATTTACTAGTCAGGAAGAAAAACAGGAAGTATCTGTCAAACAAGAAGATTGCAAAGAGGAATGTGATTCTGACAATGATTGTAAAgatggaattaaaaataaacaatataatgataaagaTGATAAAGATAATAGCAAGGaacttaaaaaattacaattttatggaCCTGGACCAAAAATGGCCGGATTTAATActaaagaaggaaaaaaatcaaacaaaacAAGAGGAGTAAAGCTTACTTATGAAGTTGATCCAttGGCAAAGTACATTTGTCACAATTGTGGAAGAGGTgacaatgaagaaaatatgCTTTTATGTGATGGATGCGATGACAGTTATCATACCTTTTGTCTTATGCCGCCGTTAACAGAAATACCAAAAGGTGATTGGAGATGTCCAAAGTGTGTTGCCGAAGAAGTTTCTAAGCCGATGGAAGCATTCGGATTTGAACAGGCACAAAGGGAATATACTCTTCAACAATTTGGAGAAATGGCTGATCAATTTAAGAGCGATTATTTCAACATGCCTGTACATatggTGCCAACATCATtagtagaaaaagaattttggcGAATAGTTTCTTCAATTGATGAAGATGTAACTGTGGAGTATGGAGCAGATTTACACACAATGGATCATGGGTCTGGGTTTCCAACAAAAACAAGTGTCAATTTGTTCACATGTGATCAAGAGTATGCTGAATCTTCGTGGAACTTGAATAACTTACCAGTTTTGCGTGGAAGTGTACTAGGTCATATAAATGCTGATATTAGTGGCATGAAGGTACCATGGATGTATGTTGGAATGTGTTTCGCAACATTTTGTTGGCATAACGAGGATCATTGGAGTTATTCGATCAATTATCTACACTGGGGAGAGCCAAAAACATGGTATGGTGTGCCAGGCTCTCAAGCAGAACGATTTGAACACTCGATGAAATCGGCTGCACCAGAATTGTTTCACAGTCAACCAGATTTACTTCACCAGTTAGTTACTATCATGAATCCAAACATTTTAACGAATGAAGGTGTTCCAGTATTCAGAACTGATCAACACGCAGGAGAGTTCGTGGTAACATTTCCAAGAGCGTATCACGCAGGTTTTAATCAGGGATATAATTTTGCGGAAGCCGTGAATTTTGCTCCTGCTGATTGgCTCAAAATTGGACGAGAATGCATAACgcattattcaaatttaagacgattttgtgtattttctcATGATGAATTGGTGTGTAAAATGTCGTTGGATCCAGATTCATTAGATATAGGAATTGCAACTGCAACCTATCAtgatatgcttcaaatggtaGATGATGAAAAAAAGCTACGGAAGAATCTGTTGGAGTGGGGTGTAACAGAAGCAGAACGAGAAGCATTTGAACTTTTACCAGACGATGAGAGACAGTGTGAAGCGTGCAAGACAACTTGTTTCTTGAGTGCAGTTACATGTTCATGCCAAAGTTCTCAGTTAGTTTGTTTAAGGCATTTCACAGAACTTTGTGATTGTCCCCCAGAAAAGCATACGTTGCGTTATCGCTACACTTTGGACGAGTTACCAattatgttacaaaaattaaaattaaaagcagAGTCATTTGACTCATGGGTGACAAAAGTAAAAGAGGCAATGGATCCTGATAAGAAAagtgataaaattgaattaagtgAATTGAAAGAACTGTTAAATGAAGCGGAAAGTAAAAAATTCCCAGAAAGTGAATTACTTATAGCTTTAACAACTGCTGTGCAAGATGCTGAGAAATGTGCAAGTGTTGCGCAACAACTTTTAAACAACAAACAGCGTACCAGAACCAGACAATCTGTTGAAACTAAATACAAGCTTACGGTAGAAGAATTAACACTTTTctataaagaaataacaaatttatgcTGTGAATTGAAGGAGTCTGATGgagtaaaatttatacttgatcaagtattgcaatttcaaaaagaagCGGAAGAACTAGAATCTAAAGAGGATGATTGTGATATTGAACAGTTGGAAAAATGTATTGAGTTTGGTGATTCTATTTGTATTGAACTACCTCAACTTACATGTTTGAAACAAaaattagCACAAATACAGTGGCTTGAGGAAGTAAAGTCTATCCAAGAAGATCCAAAGTCAATACATCGTGATGATTTagcaaaattaattgaaaaaggtATGACAATGCCTCCTCATTTAAGTATAGAAAATACTCTCTCCGAGTTGCAAGCATTAATGGTTGCAATTGACAACTGggaagaaaaagcaaaattgTATCTGCATACTAAAAATAGACAAACTATTGCATCtcttgaagaatttattcatGAAGCTGATAAAGTAGAAGCTTATCTGCCAAGTTTAGATGTTCTTCAAGATACATTAAATAAAGCAAAAAATTGGACAAAAATAATGGACGAGATACAAGCAAGAGATAATTTTccatattataatacattagaTGATCTAATTAAGAAAGGTCGAAATATTCCACTGCACCTAGATGCTCTTCCAATCTTAGAATCCACGCTTTCACAAGCAAAAGCatggaaagagagaacagCGAGAACATTCCTGAGAAAAAATTCACATTATACTTTAATGGAAGCTTTATCACCACGAATTGGTGTTGGTATACAAGCATTAAAAgctaaaaagaataaaattgaagattctGTCGGACCTGTCTTCGTCTGTGATACAAAATTGGACGATTCCAATGATTCAGCTACTATTGTGGCCGCTTTTAAATTAGCTGAACAACGCGAAATGGAAGCAATGCGGAATTTAAGGGAAAGGAACCAAATGAAAACTAAAATTGACGATTCAAAGTATTGTGTTTGTCGTCGACCAAGGTTCGGGCTTATGCTTCAGTGTGAACTTTGCAAGGATTGGTTCCActCAAATTGTGTACCTTTGCCAAAGACATCATATAAAGGAAAATTTCCAATGTCgagggaaattaaatttttgtgtcCGTGTTGCTTACGTTCAAGACGGCCACGATTAGAGACAATTTTGGCACTTTTAGTTAGTCTTCAGAAAATTCCTATTCGTTTATCAGAAGGCGAAGCGTTACAGTGTTTGACGGAACGTGCAATGAATTGGCAGGATCGAGCACGACAAGCATTGGCCACAGATGAAATTTCGACGGCATTAGCAAAATTATCTGTGCTATCACAAAAGTTAGTGGAAGCAGCAGCAAGGGAGAAgacagaaaaaattattagcagTGAATTGAAAAAGGCAGCGAATAATCCTGAATTACATCAGAGGGTTCAAGCAATTGCACCGCTCAGCGGTGTACACTCAGATGACAGTGCACTTAGTACTGCGGATGATGACGACGACGTTGTTACTATAGATGACGACGAACCGAGTTGTAGTACATTCAACAGTAACGAACACGCATATTCTTATATATCAAAAATTCAGCGTAAAACACAATCAAATGATGCAACGGAAGTCGCAGTTGTACTTTCACAAACAGCAAGAGTACGTCTAGAAGAACTAATGATGGAAGGCGATTTATTAGAAGTCGCACTCGATGAAACACAACACATATGGCGTATCCTAAGTCATACAAATAGCCCCAGTACAGTTCGAAAGTATGCATCGTATGACGAAGTTCACACTAACTTGAATCAAGACataaaagatgtaaaaaagcgtggaaggaaaaggaaatcCGACGAATtggaattattgaaaaaactTGGAAGACAAaagatggaagaaaaaaatttagctAAACGAAAAGGattacagaaagaaaaaaaattagctAGTTCTCCAGTGCCAATGAAGCGTGGACCTCGGAagatGAAACGTAAAGAAGGCGAAGAAGGGCCAAAGAGAAGGGGTGGTAACAGAAAAAAGACCAAACAGGATACCTCGGACGAAGAGGATGATTGTGCTGCTGTCAATTGTTTACGACCTAACGGTAGAGAAGTTGATTGGGTACAATGTGATGGCGGCTGTGAAGGTTGGTTCCATATGCATTGTGTTGGATTAGACCGTACAGAAATTGCAGAAGAGGACGATTATATATGTAGTAATTGTAAGGAGGCGGAGCAAAATTCAACgTCAAGAGCGCCAGATCCCCTAGCTGAATCATTAGGCCTGGATGCacttctttccctttctcaaTCTCAGGGATACCAGGGCACAGATAATGAAGCAGATATTCAAGAAACCACATCCTTCGTCAGGACGTACTAG
Protein Sequence
MVSRFDTNFGCENFFGTYRCTQDMACDRGDSDFEFIIPPEAPVFEPSTEEFHDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLYKIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLADIKIEPDSNVTEKKDRDYKPHGIISRQQIKPPAEKFSRRSKRFTSQEEKQEVSVKQEDCKEECDSDNDCKDGIKNKQYNDKDDKDNSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGVKLTYEVDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTELCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPDKKSDKIELSELKELLNEAESKKFPESELLIALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKEAEELESKEDDCDIEQLEKCIEFGDSICIELPQLTCLKQKLAQIQWLEEVKSIQEDPKSIHRDDLAKLIEKGMTMPPHLSIENTLSELQALMVAIDNWEEKAKLYLHTKNRQTIASLEEFIHEADKVEAYLPSLDVLQDTLNKAKNWTKIMDEIQARDNFPYYNTLDDLIKKGRNIPLHLDALPILESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGIQALKAKKNKIEDSVGPVFVCDTKLDDSNDSATIVAAFKLAEQREMEAMRNLRERNQMKTKIDDSKYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTSYKGKFPMSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLSEGEALQCLTERAMNWQDRARQALATDEISTALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVVTIDDDEPSCSTFNSNEHAYSYISKIQRKTQSNDATEVAVVLSQTARVRLEELMMEGDLLEVALDETQHIWRILSHTNSPSTVRKYASYDEVHTNLNQDIKDVKKRGRKRKSDELELLKKLGRQKMEEKNLAKRKGLQKEKKLASSPVPMKRGPRKMKRKEGEEGPKRRGGNRKKTKQDTSDEEDDCAAVNCLRPNGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEAEQNSTSRAPDPLAESLGLDALLSLSQSQGYQGTDNEADIQETTSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_00141055;
80% Identity
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