Basic Information

Gene Symbol
Arid4b
Assembly
GCA_036937485.2
Location
JAWNGG010000010.1:1643010-1650359[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9e-28 2.5e-24 85.9 0.1 1 89 421 508 421 508 0.95

Sequence Information

Coding Sequence
ATGAACATTGATACATCCCTGTCGTATGCGCAGTGTGGCCCTCCTACTATTTCGATTTTTACCTCGAAACGGATATTCATTTGTCTCGAGAGGCTGTTGAAAAATCGTAACTCATTTACACGGTTCCGTAAAGTGCAAAGACATCATCCAATAGGAGTCGAGTGGCTAGCTGACAAGTTGCGTCGGGGTGGAAATGGGCAGGGAACAGGAGCTTGTACGCACTCGAGCCGTGAGGTCGTTTACTTCGGACGAGTATTTCGCCTGAGATACCTTCGAGGTTACGACTATTATCCGATGTGTGAGAAATCGACAGGCTGTCATGAACGTAGCGAACTCCGTTTCGAAAACGGAGACGATCCACCGTATCTATCTGTGGGTACGGAGGTTAGCGCTAAATATAAGGGTGCCTTCTGTGAAGCAAAGATTCGGAAAGTAGTAAGATCGGTGAAATGCAGAGTAACGTATAAACAAGGTTTGGGTACAGCAACGGTAGCTGATGATCAAATAAAAGGGACTTTAAGAGTAGGGGCATCTGTTGAAGCTAAACACGGagatagaaaagaatttgTGGAAGCTACTATCACTAAAATTCAAGACTGCAGTCAATATACAGTAGTTTTTGATGATGGAGATATTACAACATTAAGGAGAACTGCGCTTTGTTTAAAGAGTGGAAGACATTTCGCAGAGAGTGAAACTTTGGACCAACTTCCTTTAACGCATCCAGAACATTTTGGAAATCCAGTAATTGGCGGAAGAAGAGGACGGCGGTCTAGACAAGCACAaGATGAAAGTAGTGATGATGAAGATAGTCCTCCACGAGGAACTCGTGATTCAGGTTCTAGTGGAACAGGCAAAGAAGGAATGGAGACAGAACCTGAAATTGGACGAGTTGTATGTGTGGAACTTGgagataaaaagaagaaagataatTGGTTCCCTGGATTAGTAGTCGCTCCAACTGCTCAAGATACAGTGAGAATTCGAGTGAGAGATGACTACCTTGTGCGCTCGTTTAAGGATGCACGTTATTATACAGTTCCAAAAAAAGAGGCCACTGAATTTACAAAAGAACTTGTCAACAAAGTTGAGAATAGCACATTGAAGGTTGCAGTAGAAAAGGCATTGCTATTTTTAGAGAAGAATGAATTACCTCCCCATTGGGATAGAGATTCTCTTTTTGGACATTCTGTATCAAGTGGAAACAGTGATTCTGATGGAGAACTTGATTCTGATagTTCTGATGATGAACCGCGTGAGGAAAAAGATCATTTTGTAGCACAATTATACAAGTTTATGGATGATCGTGGTACACCTATTAACAATTGTCCAATGATCGGATCTGAagatatagatttatataggTTATTTCGAGCTGTTTATAAGTTAGGTGGCTATAATCGTGTAACAAATCAAAAtcaatggaaattaataaCGCGTCGCCTGAGCTTCACGATGCAAAATTCACCATCTACGCACAATTTGGTTAAACAGGCCTATAAGAAATTCTTACACTCCTTTGAGgacttttatagaaaattaggTTGTACCATGGTAAATCATCCAAGAGGTACTATACGCAAACAACGTCCTGGAAGAAGTCTAATCAGAGATAAAGATAGAAATACTCCTGTACCACCTCAAATATCTGTCACTAAACctgaaaaggaagaagaagataaaaaagtcacagaagaagaaaagaaagagaaaaaagaaataaaaaaagaacaaccagtaaaagaggaagaaattgtaaagataaaaaagaaagatgaattTGAAGAAAGCGGTAGCGGACAAGACAGTGACGTGAATGTTGAGGCTGAAGCTGAATCTTCATCCAGTAGTGAAAAATCTCAAAAAATTTCGACGTCCTTATCATTACCAAATAGAAgcaaatctaaaaataaagaagattcaaagaaaaaagtaatagaaaaaaagaaagctgaACCTAAAAGACAGGAGAAGaaagatgataaaataaaagaagaggATGCTGCTAAAACAAGATCTAAATCTAAAGATGATaatgtaaaaagtaaaatatcttcTGAAAATAGGGAAACACGAACTCCATCGAGAGAATCGGAAAGAAAGACTTTATCCAAACAAAGACGATTGATAGATGAGGATCTGAAGAAACGAGGGAGGAAACGAAAAGAGTATGAAGCAGAGAAATCACGTACGGATGAACAATCAGATTCAGCTCCGTGTTACAAAGGTCCTGTGGAATTAGGAGATAGACTGAAAGTATATTACGGACCTACTCATGAATCTAAGGTTACTTATGAAGCAAAAGTTATTGATATGGAAAAAGATGGTACAGAACCAATGTATTTAGTACATTATACTGGATGGAATACGAGATACGATGAATGGATTAAATCATCAAGAATAGCACAGAATTTTACACAAGCTCAAGGTagaatgaaacgaattaaaGCTACTTCACGACCTCAAACTCCCAGTacgaatttatcaaataatataaataagtcatcaaaaattatttctaacacTAGTTCGAATACTTCGCAAAACCGACGTCGAGCACAAAGTGTTGCACCTACTACATCAGTTTCGTCTTCTTCAACAAAAGAAGccaagaaagaagagaaagaaaaagaaatatctcaACCAGTTAGATCTACGACTCCATTATCTGTTATAAGTTCTAGCTCTAGGACGAAAAGTCCAGCGACACCGGCGAATAATCGTCAAACACGAACAAGAAATAATGATATGTCAAGTATAGAACACCGGAGGCGTACTAGAAGAACTTCTGGACATGCGGATATAGTTCCATCAGAAACTGAAGAAAGTGAGACATATGATTCAGATACTACGGAATCAGAACAAACACGAACGAAATCTAAGACTGTAGAGGAAAGAAAACGTAAAGAAGCGAGATATAGAGTAGAAGATAGAATGAAACCTGACGAAACTAGCGAGGGTGAAGAAGATAAAGATAATTTAGAAGAACCGCGTAGAGGTAGGAGATTAAGAAGGACAATCAGTAAATCGCAAGGTATAAAATCTGAACCAGATAGCGATGAAGAACAACCGAAAGGTCGAGATTTCGACTTGAATCAAATACGATCTGAATTAAAAGGTTTTGATAAAGCAGTAAAATTGGAACTTGTTAGGGTTGAACCTGATCCAGAAGACGagataaaaatagaagagaaggaaaatgtttcagtttcaccaaaattagagaaaaatttagaagcatcgaaattagaaacaatgcctgaatctaaaataatagataacaCAGAagatatatatgaatttaaagaaCCAGAACCATTTGAATTTGAAGTACGAAACAAACGGGATACGAGCGGAGAAAAGgacaaaataaagaaaagagtaTTTGAAGAAGAGCCAAAAAGTCCcaagaaaaagcaaaagatAGTTGTATCACCAGTTATTAAAGAAGTTAAATCAGAAACAGATAATGATTCACgaaagaaagtaaagaaattatttagcaAAAGAACTGACGACATTACAGATAATTTACATTCTCACAAATCGCTACAATCTACATCATTAACAACATGCGAAGAAGCATTTGATAAGCTTTGTGAATCGCCACCATTCAATCAAGTGAAACCTATACCTATTATTGAGGAGACAgccaaaataaataatggcATAGATCTTTTATTCAGTGATTTACCTGGAGATGATGATGCTACTCATGATGATTCAGAAGATCGTTTAATAATATCAGAGGCAGAAGTTTCGGAAGCGgaacaagaaaatttatttacatatcaaCAAGAAATGTTTCCTTCTAATGACGGAAATGATTTAGTGGAATCAAATAAAGAAGATATAAGTTTACAAATTGAATCGGTAAGGGAAGATATAACGCTAACGGTTTCAAATAAACCTGATATAGTTGTTGAGCAAAAACAGAATATTAAATCTCCATTGCATAGTCAATCTCCAGAATTAAAACCATTGGATTCAAAATTGTTAGATATTACTCCTGTCCCATCTCCAATTGTAACAGTTCCAGCACCGATTAGTGCGAGATTACCAGCTACATCtacaattgaagaaaaactTTCAGCTGCAATGGCTTTTCGTAGTAAAACTAAAgatgttaaaaaagaagatgagATTCCCGAAGTTGTATGGAAAACATCAAAggaaatttctaagaaattagATGCTACAGTTGtacaaaaaagtaaagaagatCAGCATGGGCCTAAgattgaaagtgaaaataataaacgagaaGAGGAAGATATCGTAATAAGTAATGAAAACCAGTGTGAAGAAATAATGTGTGtagtaattaaacaaaaagaagaagaacttcAACAGTTTAAACCaaaaaaagaagtagaaattaaaaaattcgttgaaacaaaaatagaacatacaaaaatacaagaaaaagaagaagaggaatgGAAACgtgtagaaaatgaaaaatcaaaaaagaTAGAGGACGAATTTAAAGAACATGATttcaaagaaaaggaaaatcatAAGAAGATAATCAATCAAGATATGGTAGATTCTGCAGATAGTAGTGATTCTGAACAGAGActaataattgataatgagGAGTCACAAGATGTGAAGAGTTCAACATCAAATTTTGATGTTAAATTAAGAGCAGAGTTGGATAGACTTCAGGACGCGCAGGAAAGATATTCACAATTACAAACGCAAAAATCTATGCAACCGCTAAAGCATCAGCAGCAAGAATGCGTTActgaatttaaaactgagattAAAGAAATTCCTGTTACGAAAACAGATGAAGAGGGAGAAACAATTAATTCCTTATTATGTGAAGAAGAAATACCTGGTTCACCAGCGCCTATTACTGAAAGTATAGAGCAAATAAATGCTGGTCCATCCTGTTCACCTCCAAAAGTTGAAACTGCAGAAAGTAATATAGTATTGATGGAAATGCCATTTGCAAGTGCTCCTACATCTGGTCAAAGTACAACCAGCAGTACTGTTGCTACTCTCAGCATGGCACTGCCCAAAACTGTAGAAACATCTGTACCAGTTTCTTTATCTATGCAACAAAATCCAACTTTGAGCATGAGACAACAGTCTCATCATCAACATTTACCTGCGTTAATGCCTGCACAGAGAAGAGAAAGCAATGAAGCAGCACCTGTAATGGATAATACCCCTCCGACTACACCTGATTCAAGCATTTCCAATATTTCTGGCTCTccaagagaagaaagaacaggAGCTTCATCACCAACCTCAGAGGATAACATGAAACATAATCGTGATAGTTCTGAAGCGGATAATGATAGTGGTGGGAAAGGTCCAGGATTCAGTGAAGATGATACATTACCAAATGTTGAAGGAAATTCTACagatagaatattaaaaccaCCAGCAAAACGAACTATTGAAGAAACGCAATCTCCCAAAAAacgtaaaagaaacagaaagcatTCAGAATGTGATAAAAATACTACTAAAAAGACAGGAAGACACAGTAATAGACATGGTAGACATGGTGGTGGAAGCGATAGTGACGATACAAGTGAAGGTTCTAATTTATGTGGAGTTAATTCGACTTCAGCAAATCACACAAATATTACTAGTGTTCCCGATCTTAGTAACTACTCATCGAGATCACCTCGGccaacaaaatataatttctatgtaGAATTAGATCCCGAATTAGATGGTAGTCAAAGGATAGCTGTACTACAGCAAAAATTAGCTGAATTACGTAAAACATATAATGCTGTGAAAGTCGAACTTGCCGCTATTGAAAGACGTAGAAAAAAGTTAAGAAGAAGAGAACGGGAAGccATAAAGGCAGCTAAAGCAGAAATGCAACAGGCTTGTTCGTGA
Protein Sequence
MNIDTSLSYAQCGPPTISIFTSKRIFICLERLLKNRNSFTRFRKVQRHHPIGVEWLADKLRRGGNGQGTGACTHSSREVVYFGRVFRLRYLRGYDYYPMCEKSTGCHERSELRFENGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVADDQIKGTLRVGASVEAKHGDRKEFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSDDEDSPPRGTRDSGSSGTGKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGSEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFTMQNSPSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGTIRKQRPGRSLIRDKDRNTPVPPQISVTKPEKEEEDKKVTEEEKKEKKEIKKEQPVKEEEIVKIKKKDEFEESGSGQDSDVNVEAEAESSSSSEKSQKISTSLSLPNRSKSKNKEDSKKKVIEKKKAEPKRQEKKDDKIKEEDAAKTRSKSKDDNVKSKISSENRETRTPSRESERKTLSKQRRLIDEDLKKRGRKRKEYEAEKSRTDEQSDSAPCYKGPVELGDRLKVYYGPTHESKVTYEAKVIDMEKDGTEPMYLVHYTGWNTRYDEWIKSSRIAQNFTQAQGRMKRIKATSRPQTPSTNLSNNINKSSKIISNTSSNTSQNRRRAQSVAPTTSVSSSSTKEAKKEEKEKEISQPVRSTTPLSVISSSSRTKSPATPANNRQTRTRNNDMSSIEHRRRTRRTSGHADIVPSETEESETYDSDTTESEQTRTKSKTVEERKRKEARYRVEDRMKPDETSEGEEDKDNLEEPRRGRRLRRTISKSQGIKSEPDSDEEQPKGRDFDLNQIRSELKGFDKAVKLELVRVEPDPEDEIKIEEKENVSVSPKLEKNLEASKLETMPESKIIDNTEDIYEFKEPEPFEFEVRNKRDTSGEKDKIKKRVFEEEPKSPKKKQKIVVSPVIKEVKSETDNDSRKKVKKLFSKRTDDITDNLHSHKSLQSTSLTTCEEAFDKLCESPPFNQVKPIPIIEETAKINNGIDLLFSDLPGDDDATHDDSEDRLIISEAEVSEAEQENLFTYQQEMFPSNDGNDLVESNKEDISLQIESVREDITLTVSNKPDIVVEQKQNIKSPLHSQSPELKPLDSKLLDITPVPSPIVTVPAPISARLPATSTIEEKLSAAMAFRSKTKDVKKEDEIPEVVWKTSKEISKKLDATVVQKSKEDQHGPKIESENNKREEEDIVISNENQCEEIMCVVIKQKEEELQQFKPKKEVEIKKFVETKIEHTKIQEKEEEEWKRVENEKSKKIEDEFKEHDFKEKENHKKIINQDMVDSADSSDSEQRLIIDNEESQDVKSSTSNFDVKLRAELDRLQDAQERYSQLQTQKSMQPLKHQQQECVTEFKTEIKEIPVTKTDEEGETINSLLCEEEIPGSPAPITESIEQINAGPSCSPPKVETAESNIVLMEMPFASAPTSGQSTTSSTVATLSMALPKTVETSVPVSLSMQQNPTLSMRQQSHHQHLPALMPAQRRESNEAAPVMDNTPPTTPDSSISNISGSPREERTGASSPTSEDNMKHNRDSSEADNDSGGKGPGFSEDDTLPNVEGNSTDRILKPPAKRTIEETQSPKKRKRNRKHSECDKNTTKKTGRHSNRHGRHGGGSDSDDTSEGSNLCGVNSTSANHTNITSVPDLSNYSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLAELRKTYNAVKVELAAIERRRKKLRRREREAIKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2