Tflu024893.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetheella fluctuosa
Gene Symbol
znf711
Assembly
GCA_951216915.1
Location
OX578242.1:2213351-2216785[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.0034 0.26 12.5 1.0 1 20 118 137 118 140 0.92
2 10 0.0048 0.37 12.0 1.0 2 23 167 189 166 189 0.95
3 10 0.028 2.2 9.6 3.6 1 23 211 233 211 233 0.98
4 10 1.9e-05 0.0015 19.6 0.9 1 23 237 260 237 260 0.97
5 10 0.00062 0.048 14.8 0.1 1 23 265 288 265 288 0.95
6 10 0.018 1.4 10.2 1.2 2 23 295 317 294 317 0.92
7 10 2.4e-05 0.0018 19.3 6.8 1 23 324 347 324 347 0.98
8 10 0.00014 0.011 16.8 4.4 2 23 354 375 353 375 0.97
9 10 2.9e-07 2.2e-05 25.3 1.7 1 23 381 403 381 403 0.98
10 10 0.001 0.078 14.2 6.9 1 23 409 431 409 432 0.96

Sequence Information

Coding Sequence
atgataagtgatgatgtggcggaaggtgGATACGGAGACCATGACTTCGGTAAATTAGTAGATGGAGAAGCGAGACTTCTGGCCAGGTTTCCGCCTGGACAACTCAAAATGCTGCCTAAAAGAGATGACCTACGTAATATGTGCCCTGATTATGTAAAGGAATTGGATTCTTTAAAAGGCAAAACCATTACAGCGCGTATGATTGAAACAATTCTCCACACAGACAGGAAGAGGGAGAGAAAGAAAAAAGGTTTATACAACGTCAAAGAGAAAATTGCCCATATAATTAACGTATCGACTCTATTAGAAAACTGTAATGCGACCGCGTTTAAAACTAAACTGCGATGCGGGTACCCCTGCTTTTACTGTGGACAAAGATATTTCGACCTAAAGGAATTGAGGGACCATCAGCCGAAACATTCGAAAACTTTAATCTCTAAAATTTTATCGAAATACACTTGCGATACTTTAGTAGTTTACGCGGAAATAACAAATCTTAAATGCTCCATTTGCCACGAAAATATGTCAGATTTGAACGAATTAAAAAGGCATCTTATAAAGGAGCACGCTAAGAAAATGTATACAGATTTCTCTGATAGGGTTATTCCGTTTAAATATAAGCAAGAAGGATTCGAATGTCAAGTATGTCATTTCTATTTTGAAACTTTTGGCGCTATTGAAAAACATATGAATCATCATTATAGGAATTACGTGTGTAACATATGTGGCACCGGCTTTGTAACTAACCATAGACTAAAAGTACACGTCAAATCTCAGCATAATGAAGGAAATTTTCCATGTGGAGAATGTAACAAGATGTATACTTCTCCATTGCGATTGAAAACTCATTTGGATGTAGTACACAAAATGAAGCGGAGAAACAAGTGTCCACACTGTTTAGAAACATTTATAGACTATTTTACAAGACAAAAGCATATGGTCGAAGTACATGATGTCAAACCAATTTTTTACAAATGCAATGTATGTGATCACACGTTCAGTAGGCGTTACGGATTGACAACGCATTTGAAGCGATGCCATTTAGAACAAAAGGATATAAAATGCGATCATTGTAACTATACATGTTTTAGCCAAGGACAATTGAGAGCTCACATGTTAAAACATGGcggtgaaaaaatatttgaatgtaaCGTGTGTAAGAAATCGTATGCGAGGAAGAAAACATTAAAGGAACATATGCGAATTCATAATAATGATAGACGGTTTAAATGTTGTGTCTGTGAACAGGCGTTTGTTCAGAATTGCAGTTTGAAGGGACACATGAAAACACATCATCGAGAATATTTGGAGGCGAGAGAATAA
Protein Sequence
MISDDVAEGGYGDHDFGKLVDGEARLLARFPPGQLKMLPKRDDLRNMCPDYVKELDSLKGKTITARMIETILHTDRKRERKKKGLYNVKEKIAHIINVSTLLENCNATAFKTKLRCGYPCFYCGQRYFDLKELRDHQPKHSKTLISKILSKYTCDTLVVYAEITNLKCSICHENMSDLNELKRHLIKEHAKKMYTDFSDRVIPFKYKQEGFECQVCHFYFETFGAIEKHMNHHYRNYVCNICGTGFVTNHRLKVHVKSQHNEGNFPCGECNKMYTSPLRLKTHLDVVHKMKRRNKCPHCLETFIDYFTRQKHMVEVHDVKPIFYKCNVCDHTFSRRYGLTTHLKRCHLEQKDIKCDHCNYTCFSQGQLRAHMLKHGGEKIFECNVCKKSYARKKTLKEHMRIHNNDRRFKCCVCEQAFVQNCSLKGHMKTHHREYLEARE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01083620;
90% Identity
iTF_01252105;
80% Identity
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