Basic Information

Insect: Tetheella fluctuosa
Gene Symbol: Zfa
Assembly: GCA_951216915.1
Location: OX578239.1:1530373-1542371[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0048 0.37 12.0 2.7 1 23 242 264 242 264 0.98

2 11 0.7 54 5.2 0.6 1 23 271 293 271 293 0.95

3 11 0.0099 0.76 11.0 1.5 1 23 297 320 297 320 0.98

4 11 1.3e-07 9.9e-06 26.4 0.8 1 23 327 349 327 349 0.98

5 11 9.5e-05 0.0073 17.4 0.1 2 23 356 378 355 378 0.96

6 11 6.9e-05 0.0053 17.8 0.2 1 23 391 413 391 413 0.96

7 11 0.00048 0.037 15.2 1.2 1 22 419 440 419 444 0.94

8 11 0.00012 0.0092 17.1 1.9 3 23 454 475 452 475 0.95

9 11 0.00031 0.024 15.8 0.4 1 23 481 504 481 504 0.97

10 11 3e-05 0.0023 19.0 0.4 1 23 513 535 513 535 0.98

11 11 0.024 1.8 9.8 0.1 1 23 541 564 541 564 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0048	0.37	12.0	2.7	1	23	242	264	242	264	0.98
2	11	0.7	54	5.2	0.6	1	23	271	293	271	293	0.95
3	11	0.0099	0.76	11.0	1.5	1	23	297	320	297	320	0.98
4	11	1.3e-07	9.9e-06	26.4	0.8	1	23	327	349	327	349	0.98
5	11	9.5e-05	0.0073	17.4	0.1	2	23	356	378	355	378	0.96
6	11	6.9e-05	0.0053	17.8	0.2	1	23	391	413	391	413	0.96
7	11	0.00048	0.037	15.2	1.2	1	22	419	440	419	444	0.94
8	11	0.00012	0.0092	17.1	1.9	3	23	454	475	452	475	0.95
9	11	0.00031	0.024	15.8	0.4	1	23	481	504	481	504	0.97
10	11	3e-05	0.0023	19.0	0.4	1	23	513	535	513	535	0.98
11	11	0.024	1.8	9.8	0.1	1	23	541	564	541	564	0.92

Sequence Information

Coding Sequence: ATGGATGAAATAACTAAGCCGCTTGAAAACCTTTGTTGTTGTGTCGGATGCTTGTCTAGTGACGAAGATAACTTACAGCAATACTATATACAAAGTGGCCCTTTAAAGACAATTTTTCAGGTTGACTCAATAACTCTGTGTTACTTATGTAAGAGGATGGCACAGCATGCTGAGCTCTTCATACAAAATGTTCAGAGTAATCAAATATTATTGGAAAACTTCCACAGTGTAATGGACACAACCCTACAAACTATAAGAGAACAGATACAGCCTCTAGTCACTCTCACTCTCGTCACCCTCGAACCGATGAGTGTTATAGAGTTAACGGATAATGGAATTGATGAGGAGTCATCCTTGATCATGTCCAATGGTGGtagagaatttaaaattaagattgAAATGAAAGAAGAGGACAGTGATGTGTTGGAACATTTGGAGGGGGAGTTTATTGACGGTGATgatgatttccAAAACCCATATATCAAGGATGAAGATTATCCATTGAAAGAATTACAAAAAGAAGATTTAGACGGTATTGACTTATTGACTTTGAGGAAGACATTGAAGAAAAGCAAAGTTAAAAAGAAAGACAAAACAAAAGATGTGTTAAAGAAACACAAAAAAGATAGGATACCTAAAATAGAAACACTATACTTAACTCGAAAACAATGTATGGAGGAGAGAGCCAAAATGGCGCAagacaagaaatatataaactGCACATTTAAATGTAAGGATTGCATCAAAGGGTTCAATTTTAAACAGAGCTATGAAAAACATCTTGAGAGGCACAGTAAGGCTATGGGCGAATACGAATGTGATATATGCAAACAGCGTATGGGTACCGATGAAAAATTGAATGGACATAGAAAATATCATATAgtCCGATACAAGTGTTCTGAATGCGAGCTGACCCGCATCACTAAATCCACGATTAAGGATCACTACATGACATTCCACTGTCAGGGGTTCTACCAGTACCCCTGTCCATATTGCTCCAAAGTTTTCACGCGTAAAGTATACCTGCGCAAGCACATAACGATACACACAAACAAAGTGCGCGTCAAATGTGCGTACTGCGACAAAACGTATGCAAACAAGGAAGTTCTCAAGTCGCATATAATCGTTCAGCATCCAAAAGAAGTGTCAGCAGGTAATGTGAGCAAGTCGTTCGTCTGTCAGGAATGTGGAATGGCTTTCAAGGCGCCTTCCCAGCTCAAGATACATAGCACCAAACACACACATAATAAGGATTATTATTGTGTAGAATGTGATAAAAGCTTCAAAACAGATTCAATATTGAAACATCATTTGAAAACTGCTTCGCCTCATGTCAATTATATAGAACTACCCTTAGCTTGCACCCACTGTGACAAGAGGTTTGCGATACGAAGAGACCTGAACAGACACACCAACAGAGTGCATCTCAACATTAAACCGTTCACATGTGATAAGTGCGACAAGGCGTATGTAAACGGTTGGTCGTTAACAGAGCACAAGAGATACGTCCACGACGGGCACAAGAGACCCCTCAAGTACCCCTGCTCCATGTGTGATAAAGTATTTGATCGTAAGCAGATCTTAAAAGGTCATATACGAACCCACACTGGGGAGAGGCCTTTCCAGTGCAGCAAATGTCCGGCACAGTTCAGTCAGGCGAGCATACTTGGCACTCATGTTAAGCTAATACACCTGAAGCTGACGAGGGATGGGCGACCAAAGGCCAATTTAAAGTGA
Protein Sequence: MDEITKPLENLCCCVGCLSSDEDNLQQYYIQSGPLKTIFQVDSITLCYLCKRMAQHAELFIQNVQSNQILLENFHSVMDTTLQTIREQIQPLVTLTLVTLEPMSVIELTDNGIDEESSLIMSNGGREFKIKIEMKEEDSDVLEHLEGEFIDGDDDFQNPYIKDEDYPLKELQKEDLDGIDLLTLRKTLKKSKVKKKDKTKDVLKKHKKDRIPKIETLYLTRKQCMEERAKMAQDKKYINCTFKCKDCIKGFNFKQSYEKHLERHSKAMGEYECDICKQRMGTDEKLNGHRKYHIVRYKCSECELTRITKSTIKDHYMTFHCQGFYQYPCPYCSKVFTRKVYLRKHITIHTNKVRVKCAYCDKTYANKEVLKSHIIVQHPKEVSAGNVSKSFVCQECGMAFKAPSQLKIHSTKHTHNKDYYCVECDKSFKTDSILKHHLKTASPHVNYIELPLACTHCDKRFAIRRDLNRHTNRVHLNIKPFTCDKCDKAYVNGWSLTEHKRYVHDGHKRPLKYPCSMCDKVFDRKQILKGHIRTHTGERPFQCSKCPAQFSQASILGTHVKLIHLKLTRDGRPKANLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00761929;
90% Identity: -
80% Identity: -