Tflu025406.1
Basic Information
- Insect
- Tetheella fluctuosa
- Gene Symbol
- -
- Assembly
- GCA_951216915.1
- Location
- OX578242.1:5254555-5267375[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.41 32 5.9 0.3 3 23 133 153 131 153 0.96 2 14 6.3e-06 0.00048 21.1 1.1 1 23 279 302 279 302 0.97 3 14 0.011 0.88 10.8 5.6 1 23 307 330 307 330 0.93 4 14 0.00034 0.026 15.7 0.6 2 23 499 520 498 520 0.97 5 14 8.7e-05 0.0067 17.5 2.4 1 23 526 548 526 548 0.98 6 14 1.9 1.4e+02 3.9 7.2 1 23 615 637 615 637 0.96 7 14 0.2 15 7.0 0.3 2 23 645 666 644 666 0.97 8 14 0.027 2.1 9.7 5.0 1 23 672 694 672 694 0.95 9 14 0.00062 0.048 14.8 2.9 1 23 700 722 700 722 0.97 10 14 0.001 0.077 14.2 2.1 1 23 731 753 731 753 0.98 11 14 0.00015 0.011 16.8 0.6 2 23 800 821 800 821 0.97 12 14 0.00026 0.02 16.0 3.6 1 23 838 860 838 860 0.97 13 14 2.7e-06 0.00021 22.2 0.9 1 23 866 888 866 888 0.98 14 14 6.2e-07 4.8e-05 24.3 3.1 1 23 894 917 894 917 0.98
Sequence Information
- Coding Sequence
- ATGAATAACCTAGCAATAGATGTTgatccgttaagtagttttgAATACCCGCAATACAACCCGTACCCTAATAACGAAtactcatacaatttaaaagAGGAAGAGCCAAATATCACATATAAGTATGAAATGTTCCCAATCAGCCAAGGAACTGCAGATAAAAATGATGACAATATGCATAAACATGAAGTTCCCGTCACAAATCTACAAAGCAATGAAGTTCCgattgaaaatattgttaagtaTGATTCTGCTCCGGAACAACCTCAAAAACATGAAGAAGAAGACATAAAACCTATTATATTTGGTAATAAGGTTAAAAAGGAACGTACCAAAGGAAGAACAAGCAGTTACTGGTCAGTGAAGATAACAGACAAAGATTTTGCATTCTACGGTTGTGCCGTATGTAATGTACAGTACAAATCATTGCATGAATTAGATCAGCATGTAACAATACATAAAGATAGGATTACTAGTTATGATTTGAGGTTAAAGAATCAAATGTTAAAGAAAGCTAAgaataaaggtaaaaaaattaagaaggtGAAAGAGGAAATTGTAACGAAATTGGAGATTGATATAAAACCTGAAGACGGTTACATTGGGAATGAGAAAGCAGTGGATTTTGGACAAAATAATGAGAATGTACAAGGGAATGATGTGGGGCCAAACAATGATGAAGACATTTCAAAGAGTGAtgtaaaaaaagatataaaaggAAAGAAAAAGGAGTATAATCTGCAAAAGATATACAAATGTTTTTGCTGTCAGAAACAGTTTCTTTTAAGCTATTATTTGAAGTTGCATGTTCGGTCACATACagatGAGAAACCTTACACTTGCAGTATTTGTGGGCAATCATTTATAACTGCGAGCCACCTCGGTAGACATAACAAGAGGATTCATCTGGCTGTTAAACATCAATGCAGAATCTGTTATAAGTTCTTTTCtagATTCGAACTCCTAACCCGCCACTTTGATAAAAAACATCCTGATGACAAACTAGAGGGCGAGCCTTATGATTACAACGTAATATTGCCATATTTAAAAGAATTGGAAGAACAACTACGTCAGAAAACTGAAGATGAGAAAAAACCCAAAACAGAAGATTTATGGGGTGATAATTTGCCTTTATGTCAACCATTGGCTAACCAAGAAAATCAGGAACAAAAGCTTTTAGAATTAGATAACAAAGATTTCGATCCACCGCTCTTGCCGCCGGAAAATATTATGGTTGAACCTGTTCCTATATCTGAAGAATTAACTGAGACGCAAATAAAAGTTGAAGTTGAGGAGGAACTGGAGGCCGGTGTCGAACCGGAGGCCGATATGGGGGCCTGTGATGACGTGAGAGATGACAGTGTTAAAGATGAGagCTGTTCTGACGAAGATTACTTCCCATCAAACACCTGGGCGTCTACTCCCAAAATAGAACCGGCCCCCCCATCGCCCACTACAAACACCCGCCGTAAAAAAACCGACGAACGCTCGCTACAATGTGACGTGTgtcaaaagaaaataagttCAATATCGTACATGCGCGTGCACATGCGCACACACACGGGCGAGAGGCCGTTTAAGTGTTATGTGTGCGGGCGCGGATTTATTACAAGTAGCAAGATGCACCGACACGTGTTGACTCACAGTGAAACTTGGGATGACAGTGGAAACGTTAAAGATGGAAAGATGGAAGTGAAATCGGAAGATCCTGACACAAATGAAAATGGTGATAATAAATCTGATAAAGAAACGCGTCTTAAAAAATCGAAAGCGAAGTTTGCAAAAAAACGTAAGAAGGCACCAAAAGTTGATAGACAAAAGAAGAAATATCAGAAAAGGCTTCATGCTTGTGAATTTTGTCACAAAAGATTTCTTCACATGGAAACTTTACAAGTTCACAAGAAATCCCATGAAGGTGAAGAGCTGGTGATCAAATGTACTTATTGCTTGGAACAATTTGACGGTGAAACAGAAATGAGGCAGCACGAATTGACTCACGATGGTCCTAAGCCCTTTTTATGTACTCTATGCGGGAAGACTTATAAAAAACGGGAGACTATGATGTACCACAGGAAACACCATAAAGCCATAAACGAATTCGAATGTTCGATATGCCAGAAGCGTTTCAACGCTCAGTGTAAATTACAACGGCATGTCGTCACACATGGCGTTGATAAATACGTACTTAGATACGAATGTCCTGTCTGTGCGCACATGTTCAATACTAAATATCATATACAAATGCATCTGGCTACGCATCAGAAGGAGGGACtAATTGTCGAAGAGAATCGCAACGAAATACTAGCAATGGTTCTACAAAACGCGAGAAAAATCCCCAAAGGCCCCGATTCCACAGCCAACATAACAGAAATTATACCAGCAGACGAACGAAGCCGCGTGTGCAACATATGCGGCGAGGTATTCCAACACTTCTACTATCTAGAGGAACACCTAAAAAGTCACGGCTCAAAAATAGCGATCGAAGATTTaaatcaaatcgaacaaaaGAAATATGTCTGTCCAATTTGTAATAAAAGTttcaaattacattattatttaaaattgcacAGTTTCACACATTCAAAAGAGAAGCCATTCATGTGTCAGCAGTGTGGGAAGGGCTTTATAACTAGAGGGAAACTTAAGAGGCACTTGGAGACGCACACGGgacttaaaaaatatcaatgtcaTATTTGCTATAAATTTTTCACTAGACCCAGTTATTTAAGAATCCATGTCAGGACGATCCACGGTACACAAGATTATAATTTTAGAATTGAAAAAGAATGCGGTATTGGGAGTTATAATGCACTGTCTGTTAGCGATATGAGTCAGGGTAGTATATAG
- Protein Sequence
- MNNLAIDVDPLSSFEYPQYNPYPNNEYSYNLKEEEPNITYKYEMFPISQGTADKNDDNMHKHEVPVTNLQSNEVPIENIVKYDSAPEQPQKHEEEDIKPIIFGNKVKKERTKGRTSSYWSVKITDKDFAFYGCAVCNVQYKSLHELDQHVTIHKDRITSYDLRLKNQMLKKAKNKGKKIKKVKEEIVTKLEIDIKPEDGYIGNEKAVDFGQNNENVQGNDVGPNNDEDISKSDVKKDIKGKKKEYNLQKIYKCFCCQKQFLLSYYLKLHVRSHTDEKPYTCSICGQSFITASHLGRHNKRIHLAVKHQCRICYKFFSRFELLTRHFDKKHPDDKLEGEPYDYNVILPYLKELEEQLRQKTEDEKKPKTEDLWGDNLPLCQPLANQENQEQKLLELDNKDFDPPLLPPENIMVEPVPISEELTETQIKVEVEEELEAGVEPEADMGACDDVRDDSVKDESCSDEDYFPSNTWASTPKIEPAPPSPTTNTRRKKTDERSLQCDVCQKKISSISYMRVHMRTHTGERPFKCYVCGRGFITSSKMHRHVLTHSETWDDSGNVKDGKMEVKSEDPDTNENGDNKSDKETRLKKSKAKFAKKRKKAPKVDRQKKKYQKRLHACEFCHKRFLHMETLQVHKKSHEGEELVIKCTYCLEQFDGETEMRQHELTHDGPKPFLCTLCGKTYKKRETMMYHRKHHKAINEFECSICQKRFNAQCKLQRHVVTHGVDKYVLRYECPVCAHMFNTKYHIQMHLATHQKEGLIVEENRNEILAMVLQNARKIPKGPDSTANITEIIPADERSRVCNICGEVFQHFYYLEEHLKSHGSKIAIEDLNQIEQKKYVCPICNKSFKLHYYLKLHSFTHSKEKPFMCQQCGKGFITRGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRIEKECGIGSYNALSVSDMSQGSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01083588;
- 90% Identity
- -
- 80% Identity
- -