Basic Information

Gene Symbol
-
Assembly
GCA_951216915.1
Location
OX578238.1:4151104-4153422[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.65 1e+03 0.6 0.0 4 19 156 171 154 188 0.89
2 5 0.0014 2.2 9.1 0.1 1 37 261 299 261 308 0.89
3 5 2.4e-09 3.7e-06 27.6 0.3 3 44 316 361 314 363 0.93
4 5 4.6e-08 7.1e-05 23.5 0.0 1 43 367 409 367 411 0.96
5 5 4.4e-06 0.0069 17.2 0.0 4 45 420 463 418 464 0.93

Sequence Information

Coding Sequence
atggatAACATGTTTAATAGCGATAGCGAAAGTGATGAAGATTTAGATTCACAATTAAACGATCTGAATCTGATGAGCAAGGTCTTGGAGGCTGAGGATCACACGATTCAAGCAAATTCCAAGTTCTTATCATCCGGTTCTATTGCTCCAACCGCGTCAAACATTATTCAAGAATACTCTAACATTGATAAAGCAATCTACCTGAACAAATTGTGTGATGAAAAGTTACAGACCTTGGAAAATCACCTTCATATACGATTAAATGAGTGCCGGCAGAAACTTGTTGAAATAAGGAACCCATCGTCTTATGTAGAACTGGACAAACAAGACTCATTCCGCTATTTCAACTGTGGTAAGCCATACTTTAAAGATAAATCGAATTTTCCTGCACCAGATAATGAAGATACCATACTCATGGCTAAGTCACAAATGTATGACTTCTCTCAGGTAGTATCCGTACCAGGTTGGACAGTCAGAGATAAAAGTAAATTTGTGTCTGCAATACACAAAATGTCACAAGATATACGAAAGAATGAATTGCACTCAAAAATAGCACAGATACGACGTGAAAACAAAGGTGATATGAATAAGAAAACTGAAAAGCTTATTAAGGATATCAGAAAAGAAATTGATAGAGTCAGTAAAAAGTCCTTGACTGAATTGGCTCTACCAATTGACCAAGAATATGATTGGGAAACATTATCTAATAAATTGGATCGGAGGCATACAGCACAAGAATATCAATCTCTTTGGAAGTTATATTTCCATccaagtataaataaaaatagttgggATAAAAATCAACATATATCATTACAAAAGATTGCCCAACAGAATAATTTACAGGATTGGGATGATATTGCTAAGAAGCATAACACAGACCGAACTGGTTATCAAACATTTGTTTATTACCGAACAAATATGACTAATACATTTACTGGACGGAAATGGACTAAAGAAGAGATTGAGTACCTAAAACGACTTATTGAATACTATAAAGAGGACAACTATATACCCTGGGGTAAAGTTGCGGCATCTATGGAGAATAGaactaaaatacaaatttacaataaatattttcgacTTATAGAGCAGCGAAAAGGCAGGTTTCTACCTGAGGAAGATTCTGTGATTCTCAATTGTGTCAATAGATTTGGTCTTAACTTCAAACTAATGATGAATTATTTACCTGGTCGCTCTATGATACAGCTCAGAATGAGATATAGAGTTTTGACTAAAATGAGAGTTTCAGCAGTATGGACAGTGAATGAGGACAAAAAACTTATTCAAATAATGGCAAACCAGGATTCATCTATGAATTATTCTCATATAACTGAGCATTTTCCTGGGAAAGACAGAATTCATCTGAGGAGCAGATATTTAACACTAGTAAAGTGGATGAAAAGGAATCCCAATCTTGATATAGTTAAAGCACCCCGGCGTGGCGCACGTCGACTAAGACATGGACAAGCTACTGAAGATTTAAATAAAGCAgttgaaattttgaaaaataggaTGGTAACTgaagttgaaattaaaaatagtaaaagaatCACAAGAGAATCTTCCGAAGAAGATATTGAGGATGCTATTATAGCCACTCtggttaatgaaaatataagaacAGGTCAGCATGAAGACTTTTACGAAAATgcaaataatgatgatgaattagGGCCAAATAGGGTGGTTACTTCAGGTGAAAgacttaatattacaaatataaaaaagacattaattttactaaatgcaacATTAAATATAGACCTTTATAAAGATAGTGTCTACAGTAAAAAGTATCCAGGTTTGGCAGATACAACAAAAGAAGCATCTTTGATCAAAGTTAAATCATATTCTAAAAAGGAAACAGTTAAAACAATACATCTAACCAACTATCCTGACATATGGGGCAATCATACACTGGGAACATTAAATTATGTGTTTCCACCACATTATGCAACTATTACTGGTTGTAGAACATTAATGATGCAAATTACCCCTCAGCATATGAAAGACACAAAccctataaatattaatgtactaATGAGAAGGAACTATCTCCTCAAACAACAAATTCAGCGCTTGGTGGAAAGATTCTATAATTTGTTTGTATGGCCTATGATACTTTCTAATGAAGGTCCCAATATTTTATCCATGGATGACAAGAGTGCTTCaaaatatgaaaagaaaaacaattttaatgtaaacacTGGGTTTGTACCAGATAATGAAAACTCATCAAATAAttctaatcaaaatataaattcccAAGAAAAGGGTAATGATAATTTGAAGCACAGTGAAACTGATTCtgattaa
Protein Sequence
MDNMFNSDSESDEDLDSQLNDLNLMSKVLEAEDHTIQANSKFLSSGSIAPTASNIIQEYSNIDKAIYLNKLCDEKLQTLENHLHIRLNECRQKLVEIRNPSSYVELDKQDSFRYFNCGKPYFKDKSNFPAPDNEDTILMAKSQMYDFSQVVSVPGWTVRDKSKFVSAIHKMSQDIRKNELHSKIAQIRRENKGDMNKKTEKLIKDIRKEIDRVSKKSLTELALPIDQEYDWETLSNKLDRRHTAQEYQSLWKLYFHPSINKNSWDKNQHISLQKIAQQNNLQDWDDIAKKHNTDRTGYQTFVYYRTNMTNTFTGRKWTKEEIEYLKRLIEYYKEDNYIPWGKVAASMENRTKIQIYNKYFRLIEQRKGRFLPEEDSVILNCVNRFGLNFKLMMNYLPGRSMIQLRMRYRVLTKMRVSAVWTVNEDKKLIQIMANQDSSMNYSHITEHFPGKDRIHLRSRYLTLVKWMKRNPNLDIVKAPRRGARRLRHGQATEDLNKAVEILKNRMVTEVEIKNSKRITRESSEEDIEDAIIATLVNENIRTGQHEDFYENANNDDELGPNRVVTSGERLNITNIKKTLILLNATLNIDLYKDSVYSKKYPGLADTTKEASLIKVKSYSKKETVKTIHLTNYPDIWGNHTLGTLNYVFPPHYATITGCRTLMMQITPQHMKDTNPININVLMRRNYLLKQQIQRLVERFYNLFVWPMILSNEGPNILSMDDKSASKYEKKNNFNVNTGFVPDNENSSNNSNQNINSQEKGNDNLKHSETDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-