Tflu011807.1
Basic Information
- Insect
- Tetheella fluctuosa
- Gene Symbol
- -
- Assembly
- GCA_951216915.1
- Location
- OX578222.1:10351195-10351674[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-07 0.00016 22.0 0.2 18 41 93 116 84 118 0.94
Sequence Information
- Coding Sequence
- atgccTAGACCATTCGATTCACATGAATTCGTGgatatgatattattgtacggaGAAGCTCGTGGTAATGCATCACGTGCCCTGGTGTTGTACCGTGATCGTTTTCCAAACAGAAGGCACCCGAGGAATGCTCGCGTGATTACAAATGCAGTACAACGCTTACGTGATAACCGTGCTCTTGTCCCCGGACATCAATACGAGGGCAACAGACCTCTAAATGTCAGTTGGCAATTGGAAAGAAGAATTCTTCGATATTTTAGACAGCATCCCACTTCCAGTACTAGAAAAGCTGGTCGAATATTTGGAGTCAATCACCGCACCATAAACAAAGTAATGAGAAGAAGGAAGCAACATCCTTTTAAGTTTTTGAAAGTCCAGTCTTTTACCAAGAGATTTACCTGTTCGCACTCAATTTTCTCAATGGTTTTTAGCCATGTACCAAGAAGACAACAACTTTTTGCATCATATCATCTGGCCTGA
- Protein Sequence
- MPRPFDSHEFVDMILLYGEARGNASRALVLYRDRFPNRRHPRNARVITNAVQRLRDNRALVPGHQYEGNRPLNVSWQLERRILRYFRQHPTSSTRKAGRIFGVNHRTINKVMRRRKQHPFKFLKVQSFTKRFTCSHSIFSMVFSHVPRRQQLFASYHLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01416728;
- 90% Identity
- iTF_01416728;
- 80% Identity
- -