Tflu020933.1
Basic Information
- Insect
- Tetheella fluctuosa
- Gene Symbol
- -
- Assembly
- GCA_951216915.1
- Location
- OX578234.1:8496755-8497123[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-08 1.5e-05 25.3 0.0 4 39 18 52 15 57 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGGAATCGGAAAAGGAAGACGGAAATTGGTCTACACGATGCTAATGATATGAAAGAAGCAATAGAGTTGGTTGAAAATGGATTACCCTTGAGAAAAGCAGCCGAAAGAAAGAACGTAAATTATGGCACTTTATAtcgttatgttaaaaaaaaagcctGTTCAGCCGAGGAAACTGAAAATCTGCGGTTGACTCCTAATAACGCGGTTAATAAAGTTTTTTCAAATGATCAAGAAtcagcattaaaaaaatatcttataacgTGCTCAAAAATGTGCTACGGTCTTGACACGACTGAAACTAGAAAACTAGCTTATGAAATGGGTATACCACAAGCTAAAGATGCCAGCATCTTGGAAAGCTAA
- Protein Sequence
- MVRNRKRKTEIGLHDANDMKEAIELVENGLPLRKAAERKNVNYGTLYRYVKKKACSAEETENLRLTPNNAVNKVFSNDQESALKKYLITCSKMCYGLDTTETRKLAYEMGIPQAKDASILES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00198064; iTF_01507140; iTF_00198063; iTF_01028223;
- 90% Identity
- iTF_00198063;
- 80% Identity
- -