Tflu014718.1
Basic Information
- Insect
- Tetheella fluctuosa
- Gene Symbol
- -
- Assembly
- GCA_951216915.1
- Location
- OX578226.1:2692636-2693193[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-09 6.4e-06 26.5 0.1 4 38 54 88 51 92 0.90 2 2 7.6 5e+03 -2.0 0.0 24 31 145 152 144 152 0.77
Sequence Information
- Coding Sequence
- ATGCGTGGTTTACCAAACCAGTTCAAAGATTTTAAACTTACAGAATCATCAACATCAAGCAGCATAAAATTAGAAATTGATTTCGACCAAGCTATTCCGAACGATTCAACAGATTATCCCACAACTCACAGTAAAACAAGATGTCATTGGAGTCGTATGAATTTGAAAATGGCAATAACGAAAGTGCTTACAGAAAATATGCAAATTCGCAAAGCGTCTCGAATGTACCGCATTCCAGAGTCGACTTTACGAAAATATGTCAAATCAATAAAGCACGGCAATGAGATTATGGTAGAACCAAAATTAGGACGATTTAGAAGAACTTTCCCTGACCTATATGAAGAACAAATGATCAAGCACATCGAAGACCTCAGCAGCAAAGGTGTTCCGATGACCAAAAGTGAATTCCTGAAGCTAGCCTTTGAATTTGCAGAGGATCACGGAATCCCGCATCGATTTAATACTAAATATCGGACAGCCGGTGATGACTTTTATCGCGGTTTTATAAAAAGGCATCCTGATTTCAAATTATCATTGAAATTTgggaacaataaataa
- Protein Sequence
- MRGLPNQFKDFKLTESSTSSSIKLEIDFDQAIPNDSTDYPTTHSKTRCHWSRMNLKMAITKVLTENMQIRKASRMYRIPESTLRKYVKSIKHGNEIMVEPKLGRFRRTFPDLYEEQMIKHIEDLSSKGVPMTKSEFLKLAFEFAEDHGIPHRFNTKYRTAGDDFYRGFIKRHPDFKLSLKFGNNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -