Tflu012807.2
Basic Information
- Insect
- Tetheella fluctuosa
- Gene Symbol
- -
- Assembly
- GCA_951216915.1
- Location
- OX578223.1:12441290-12450805[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8e-11 5.2e-08 33.2 0.0 4 39 179 215 176 219 0.90 2 4 6.1e-11 4e-08 33.5 0.3 2 39 231 268 230 271 0.92 3 4 4.1e-16 2.7e-13 50.1 0.1 2 45 286 330 285 330 0.96 4 4 2.1e-18 1.4e-15 57.4 0.1 1 43 337 380 337 381 0.96
Sequence Information
- Coding Sequence
- ATGCTCAGCCACGGATTATCTCGAGTGAAATGCGAACCACAATCGGATGAAGACGACAGCGACTCACAATTTTCTCACGGATATTTATCCCATCAGctaCCCTCATCGGTTTATCCAGTGAATATAAAATCAGAGTGCCGTATTGACGAGAATGTACCATCGCATCTACTGCAGCATTTACAGGGAACAGGTCTGGAGGAGCTGGCACCGCTGGCGCCGGCGGGCCCGGCCGCCACCCCGGTGTGTGTGAAGCAGGAACCGGCGGATACTCCTGCCTTGACTCTTGAGACTCTGCAGTCCGCTCCTCATAATGCTGCGGGCTCCATTCTGATCGATAGACACATGTCGATGTCGGCGTTTGAGCTCAAAAATGAAGTGCCTGACTCCTCGGAGTTTATGCCATTATTGGCCGTCAAAGATGAACCCGTATCCGAAGGAGAACTACAGCAACTAAGTGGTGACGATACGAGCGACTCGAGCGGTGCCCAGCATGAGCCCACCACACGCGGCAGCCCCAAGAGCTGGTCGCAGCAGGACATGGATAACGCGCTTGAAGCACTGAGGAAACACAACATGAGTCTAACTAAGGCATCAGCTACATACGGTATTCCCTCAACAACGCTCTGGCAACGCGCGCACCGACTAGGAATCGATACACCGAAGAAGGAAGGTGCTTCGAAATCTTGGAGCGAGGCGGATTTACGTGGAGCCCTGCACGCTCTAAGGGCCGGCGCTATATCTGCTAATAAGGCGAGCAAAGCTTATGGTATCCCGAGCAGCACTCTTTACAAGATAGCTCGTCGCGAAGGCATCCGACTGGCGGCGCCGTTCAACGCGGCCCCGACGGCGTGGCGGCGCGCCGACCTGCAGCGCGCGCTCGCCTCCATCCGCTGCGGCGCCACCTCCGTGCAGCGAGCCGCCTCGCAGTATGGGATACCCACCGGCACACTGTATGGGCGATGTAAACGAGAAGGCATAGAGCTATCTCGTTCCAATCCTACACCATGGTCAGAAGATGCCATGGGGGAAGCCCTAGAAGCAGTAAGGGTCGGTCAAATGTCAATAAACCAGGCAGCGATACATTACAATCTGCCATACTCATCGCTCTATGGACGATTCAAGAGATGCAAGTACCAAGCACAGATTCTGCCATCCATTCAACAAGAAATACAAAAGAGCAACGAAGTGGAAAATCAAAACCAAGATATGTATTACCATCAGCAGATGCCCACCCACCCAGTTCATCACCTTGAAGACCAATCACACGTTCCGTACGTACAGCACGTTCATGAGTATATGCAGGATTCGTCGGCACATAACATGTTACAGGACCAGTATGGACAAGCAGTGTATTACAATCATAGCTTTAGCAGTATAGCTACCAGCTGA
- Protein Sequence
- MLSHGLSRVKCEPQSDEDDSDSQFSHGYLSHQLPSSVYPVNIKSECRIDENVPSHLLQHLQGTGLEELAPLAPAGPAATPVCVKQEPADTPALTLETLQSAPHNAAGSILIDRHMSMSAFELKNEVPDSSEFMPLLAVKDEPVSEGELQQLSGDDTSDSSGAQHEPTTRGSPKSWSQQDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALASIRCGATSVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQAQILPSIQQEIQKSNEVENQNQDMYYHQQMPTHPVHHLEDQSHVPYVQHVHEYMQDSSAHNMLQDQYGQAVYYNHSFSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00761549;
- 90% Identity
- iTF_00761549;
- 80% Identity
- -