Basic Information

Gene Symbol
kn
Assembly
GCA_951216915.1
Location
OX578225.1:2355179-2365052[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-122 2.2e-118 396.8 0.0 205 387 1 201 1 205 0.99
2 2 1.2e-08 9.2e-05 21.6 6.8 418 561 209 361 201 375 0.62

Sequence Information

Coding Sequence
ATGAGAAGATTTCAAGTGGTGATATCGACGCAAGTGATGGTGGACGGGCCTCTCCTAGCAATATCGGACAACATGTTCGTCCACAACAACAGCAAACATGGTCGTAGAGCGAAGAGGCTTGACCCAACTGAAGGTACTGACGCCGCGCCAGACACTAATTCAGGCCTATATCCGCCGTTGCCAGTAGCAACGCCGTGCATTAAGGCGATATCACCAAGTGAAGGTTGGACTTCGGGGGGATCTACGGTGATCATCGTAGGGGACAACTTTTTCGACGGTCTGCAAGTTGTTTTTGGGACCATGTTGGTTTGGAGCGAGTTAATAACTTCACACGCGATAAGAGTCCAGACACCTCCAAGACACATACCTGGTGTGGTGGAAGTGACCCTATCGTACAAAAGCAAACAATTCTGCAAGGGGGCGCCGGGAAGATTCGTTTATGTTTCAGCACTCAACGAGCCCACGATAGATTACGGTTTTCAGAGACTACAGAAACTTATACCGAGACATCCTGGTGATCCTGAGAAATTACCAAAGGAAATAATTCTAAAACGAGCAGCAGACCTCGCAGAAGCCTTATACTCAATGCCTAGGAACAACCAGCTAGGTCTTGGAGCGCCCAGGTCTCCTCCTGGTGCCAGCATGCCTTTCAACTCTTATTCTGGACAATTAGCTGTTAGCGTTCAGGACACCGCGGCTTCGCAGTGGACTGAAGAGGAGTACGCGCGCAGTGGTGGGTCGGTGTCGCCGCGGTACTGCTCCGCCGCGTCCACGCCGCACGCCGCGCCCGGCGCCTACCCACACCCGCAGCACTACCCTGCACCGCCTACCTCGCTGTTCAACACTACCTCTCTGTCGCTAGGACCGTATCATCCTGCAAACATGAATGGACACGTAACTGAACACTGTAACGCGTATAACACGAAAGATAGCGGACATTATAGTGAAAGAAACGGGAATTCAAAAAGCGCGGGCGACTGTCCAGCAAACACTCATACAAAATGCAACTACGATGTGAAAGAGTCGCTGAATAAAGAGACCAAGTTGAGAAGCGCTTTTGCTGTTGTAAGACACAGTCCGCCCCGCTCCCATGCTCACCATCAAAATTGGCAGCATCTCGCCGTTCAATGTTAG
Protein Sequence
MRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAAPDTNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPGASMPFNSYSGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPGAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHVTEHCNAYNTKDSGHYSERNGNSKSAGDCPANTHTKCNYDVKESLNKETKLRSAFAVVRHSPPRSHAHHQNWQHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-