Basic Information

Gene Symbol
Kdm5
Assembly
GCA_951216915.1
Location
OX578239.1:481133-510735[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.5e-25 2.1e-21 76.8 0.0 2 89 101 184 100 184 0.93
2 2 2.3 5.8e+03 -1.5 0.0 32 65 271 306 271 319 0.69

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAGCATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACATTCACCGTGCCCCCGGAGGCGCCTGTCTTCGAGCCAACGCCCGAGGAGTTCCTGGACCCTCTGGCTTACATCAGTAAAATCCGACCCATCGCCGAGAAGTCGGGGATTTGCAAGATAAAACCTCCAGCGCACTGGCAGCCTCCATTTGCTGTCGACGTAGATCGATTGCGATTTACACCCAGGATACAGCGTTTAAATGAACTTGAGGCAATAACCCGGGTGAAGTTGAACTTCCTCGATCAGATCATCAAGTTCTGGGAGCTGCAGGGCTCCGTGCTCAAGATACCGACAGTCGAAAGGAAGCCTCTCGACCTCTACGCCTTGCACAAGATTGTCAAGGAGGCTGGTGGTTTCGAAGCATGTTCAGCGGAGCGCAAATGGTCGAAGATCGCGCGGCGCATGGGCCACCCCCAGGGCAAGGGGATCGGCTCCATCCTCAAGAGTCACTACGAGAGGATCCTGTACCCCTACGATGTCTTCAAGAGTAATGGCGCCGTCGGGGACAACAAGGAGACTAAAATCGAAGTTAAAACGGAGCAGACCCCCGAAAAGGTGAACCAGAACCCGTCGACCCGCAGCCGGTCGAGCAGCAAGCCCCCTATTGGAGCGGGGGCGGTGCCGGGGGCTGGGGTGGGGGTGGGGGCGGCCCCGCCGGCGCGCCGCTACAAGAGCTCGGAGCCGGAGCCGGCGGCCGAGGGCAGCCACACGGAGGGCGCGCTCATGGGCGTCCGCGACGCACACATGCTGAGGACGCCCGTCAAGGAAGAGAGTGGGGCGGAGACCAGGAGGAGTCCCCGCGAGAACAAGTGGATGTCGGCGGCGGGCAGCTGCGGGGCGCGCGGTCGGGTGACCCGGTCGACGCGGCTGCGCGAGCACCGCATGTCCAACATGACCGTCTCTGTGACCCCCGCCCCCACCACCCCCACCCCCACCACCCCCGCCTCCGCGACCACCCCCGCAGCCGCCGCCGTCGTCGACCTCCCCGCCCACTGCATACTGCCGCACCCCGACGACCCGCTAGCGAAGTACATGTGCCGCGTGTGCGGGCGAGGCGACGTGGAGGAACAGATGCTGCTGTGCGACGGGTGCGACGACTCGTACCACACGTTCTGTCTCGTTCCCCCGCTCGCTGACGTGCCTAAAGGGGACTGGCGCTGTCCCGTCTGCCTCGCCGAGGAGGTATCAAAGCCAACTGAGGCATTTGGATTCGAGCAAGCAACGCGGGAGTACACACTGCAACAGTTCGGCGAAATGGCCGACCAGTTCAAATCTGACTACTTCAATATGCCGGTACATATGGTGCCAACATCAACGGTGGAGAAAGAGTTTTGGCGGGTCGTGTCGTCCATTGACGAAGACGTCACTGTCGAATATGGCGCTGATCTGCACTCTATGGACCATGGCTCTGGTTTCCCGACGAAGTCGAGCGCCCACCTGTACCCCGGCGAGCAGCAGTACGCGGACTCCAGCTGGAACCTGAACAACCTGCCCGTGCTCGAGGGCTCCGTGCTGGGACATATCAACGCTGACATATCTGGCATGAAGATCCCATGGCTATACGTGGGAATGTGCTTTGCTACATTCTGCTGGCACAATGAGGACCACTGGAGCTACTCCATCAACTATCTGCACTGGGGAGAACCCAAGACGTGGTACGGAGTACCTAGTTCCAAGGCAGAACAGTTCGAGGCGGCGATGAAGGCAGAAGCCCCGGAGCTGTTCCAGCTTCAGCCGGATCTACTCCACCAGCTTGTCACCATCATGAACCCCAACATTTTAATGAAAGCTGGTGTACCGGTTTATAGGACGGACCAGCACGCGGGTGAGTTTGTGATCACGTTCCCGCGCGCGTACCACGCCGGCTTCAACCAGGGGTACAACTTCGCTGAGGCCGTCAACTTTACACCCGCCGACTGGCTAAAAATGGGTCGCGAGTGCATCTCCCACTACTCGACCCTGCGTCGGTACTGCGTGTTCTCCCACGACGAGCTGGTCTGCAAGATGGCGCTGGAGGCGGACTCGCTCAGCCTGACCGTCGCGCTGGCCGCCTACCGGGACATGCGCACCATGCTGCACGACGAGAGGAAGCTCCGGAAGGGCCTGCTCGACTGGGGCGTGACCGAGGCGGAGCGTGAAGCTTTCGAGCTGCTCCCAGACGACGAGCGGCAGTGCCAGCTGTGCAAGACGACCTGCTTCCTGTCCTGCGTCACGTGCGCCTGCACCGCGCACGTCGCCTGCCTGCGACACTACACGCACCTCTGCAGCTGCGACCCGCACTACCACAAGCTCAGGTATCGATATACCCTGGACGAGTTACCAGCGATGCTGGAGAAGCTCAAGAAGAAATCCGAATTGTTCCGCGAGTGGGCGGAGGCGGTACAGAACGCCCTGGACCCTGACACGCCCAAGACTTGCGACCTGGATGGACTGAGGGCACACTTGAAACGGGCCCATGATCTTAAGATGCACAAAACAGAACTAGTCCGCGCGCTAGAAACAGCAGTAGAAGACGCGGAAAAGTGTGCGAGTGTAATTCAACAGCTGGATCTGAACAAGATGCGGACTCGAACCCGCCACCACGACCCCAAGTACCGGCTCACTATACACGAGCTCACGCTGTTCGCCGCCGAGATAGACGGCCTGGCCTGCGTGCTGCCCGAGGGTTCAGCGGTAAAGGAGGTGTTGCGCCAAACAGCAGACTTTGAGACGCGCTCTACAGATTTGTTGAACAAAGATCTAGAGAAAATTGAACCTGCTTACGTCAGGGAACTGGAAGagGTGGTAGAACTAGGGTCTCTCCTCTGCATAGTTCTGCCCCAACTATCCCCACTGCAAGCGCGACTCCAACAAGTGAAGTTCATAGAGGAAGTGCGCACCTACCGCGAGGATTACTCCAACTTGACGCCGGAGGTCATCGACCGCTTGCTGCAAGACGGCGCCAATGTCGTGCCGCATTATAAGGTCGAGCTGGAGAGATCTATGCTGTACAAACTTAAAGCTCAAGTGGAGGAATGGGAGGAGCGTGCCAAGAGCATGCTGACGGACACGAGCCGGCCGCGGGCcagcgcggcgggcgcggcgggcgggTCGGACGCGGCGGAGCagcagccgcagccgcagccggAGCAGCAGCCGgagccgcagccgcagccgcagcgGCACACGCGGCTGGCGGAGCTGGAGGCGCTGGTGCGCGAGGGCGAGCAGGTGGAGGCGGCGCTGCCCTCGCTGCACGCGCTGCACGCCGCGCTCTCGCACGCGGCCGACTGGCTGCACAAGGTGGAGGAGATGCAGTCCAAGGACTTGTACCCGTACATGCACACCGTGGAGGCGGTGGTCCGCCGCGGTCGGCAGATACCGCTGGCTCTGTTCGAAAAAGATCAACTCGCCGACGCCTTGCTGTCGGCCCGGGAGTGGAAACGAGGGGCCGCCGAAATGTTCCTCAAGAAGAACTGGTCGTACTCGCTCCTGGAGGCGCTGTCCCCCCGCCCGGAGGCGGCCCCCCAGGGGGGACGGCGGCGGGCCCCCCGCGCGCCCCCCGCGGACCCGCCGCCCTCCTCGCTGGAGGCGGGCCTGTTCCTGCGCAACTTCAGCGAGGACTCCACGCCCACCGAGATCGTCGCCGCCTTCAAGCAAGCCGAGACTAGGGAGCTGCAAGCTATCAAGGAGCTTAGgGCACGAAATATGCGCAAAGAAGTGCGCGCGCCACCATCGGCGATGGTAACATTCTGCGTGTGCCAAAAACGACAGTACGGGGTCATGACGCAGTGCGAGCTGTGTAAGGACTGGTTCCATGCTAACTGCATAGCGGCAGGTAAAGAAGAGCGCGAGGAGTCACCAGAACGAGTGGATTTACCTTTCCCGAGTGCTGACCCCAAATTCCTATGTCCTGACTGCATGAGGACTAAGCGACCGAGATTAGATCGCATACTCGCTTTATTGGTGTGGCTGCAGAAGCTGCCGGTCCGGTTGGCAGAGGGTGAAGCCCTGCAGTGCGTGACGGAGCGCGCCATGGCCTGGCAGGACGCCGCGCGCGCGCTGCTCGCCAGCCCGCTGCTCGATGCGCTGCCCGACCACCGCCCCCACCACCCCATGGTACACACACAACTACACACAACATGA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEACSAERKWSKIARRMGHPQGKGIGSILKSHYERILYPYDVFKSNGAVGDNKETKIEVKTEQTPEKVNQNPSTRSRSSSKPPIGAGAVPGAGVGVGAAPPARRYKSSEPEPAAEGSHTEGALMGVRDAHMLRTPVKEESGAETRRSPRENKWMSAAGSCGARGRVTRSTRLREHRMSNMTVSVTPAPTTPTPTTPASATTPAAAAVVDLPAHCILPHPDDPLAKYMCRVCGRGDVEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNILMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECISHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCQLCKTTCFLSCVTCACTAHVACLRHYTHLCSCDPHYHKLRYRYTLDELPAMLEKLKKKSELFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAVEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTADFETRSTDLLNKDLEKIEPAYVRELEEVVELGSLLCIVLPQLSPLQARLQQVKFIEEVRTYREDYSNLTPEVIDRLLQDGANVVPHYKVELERSMLYKLKAQVEEWEERAKSMLTDTSRPRASAAGAAGGSDAAEQQPQPQPEQQPEPQPQPQRHTRLAELEALVREGEQVEAALPSLHALHAALSHAADWLHKVEEMQSKDLYPYMHTVEAVVRRGRQIPLALFEKDQLADALLSAREWKRGAAEMFLKKNWSYSLLEALSPRPEAAPQGGRRRAPRAPPADPPPSSLEAGLFLRNFSEDSTPTEIVAAFKQAETRELQAIKELRARNMRKEVRAPPSAMVTFCVCQKRQYGVMTQCELCKDWFHANCIAAGKEEREESPERVDLPFPSADPKFLCPDCMRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLASPLLDALPDHRPHHPMVHTQLHTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01083079;
90% Identity
iTF_01415602;
80% Identity
-