Tocu020838.1
Basic Information
- Insect
- Tethea ocularis
- Gene Symbol
- -
- Assembly
- GCA_963555595.1
- Location
- OY741983.1:4576737-4603855[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3.6 2.3e+02 3.0 0.0 2 23 483 504 482 504 0.95 2 15 0.014 0.87 10.6 0.1 1 23 514 537 514 537 0.95 3 15 0.052 3.4 8.8 3.8 2 23 744 765 743 765 0.95 4 15 9.6 6.2e+02 1.7 1.1 1 23 777 801 777 801 0.90 5 15 0.0032 0.2 12.6 0.3 2 23 808 831 807 831 0.97 6 15 0.1 6.6 7.9 0.2 1 23 837 859 837 859 0.93 7 15 0.0092 0.59 11.2 5.3 1 23 865 887 865 888 0.96 8 15 0.047 3 9.0 0.0 2 19 898 915 897 918 0.90 9 15 1.1 70 4.6 0.2 1 23 997 1019 997 1019 0.96 10 15 3 1.9e+02 3.3 7.2 1 23 1026 1048 1026 1048 0.95 11 15 0.002 0.13 13.2 1.8 1 23 1097 1120 1097 1120 0.95 12 15 0.0018 0.11 13.4 0.6 1 23 1127 1150 1127 1150 0.98 13 15 0.0056 0.36 11.8 0.2 2 23 1172 1194 1171 1194 0.96 14 15 0.0005 0.032 15.1 2.8 2 23 1216 1238 1215 1238 0.95 15 15 0.0014 0.09 13.8 0.3 1 23 1288 1310 1288 1310 0.96
Sequence Information
- Coding Sequence
- ATGGAGGAGCCTCATCCTCCTCTCATATTGTGCATGGAGAATATGTCCGGAGAAGAGGTAGCGCTGCCAATTGAACCTCACGATGATTTCCAGACGTTCCTAAATAAGGcaaaAACACTTCTAGGCTTCGACGTAGACATTAATTCCATAACTAGAAACCAACCAGTTTCTCTAAACGATAACATTTACCAATTCCTCATAACCGCTGAGAACACAGCTGATGGCGCATTGGCCGCACAAGACTTTGATCAAATGTTGGAACCAAACGATGGTTCTAATGATTTAGTGTACATTTTGGATGATGGCACACAAATACGGgcttcacaaatacatttcgaTAATGAAGATCCTCCTGTAGATCTGACAGCTGAAAAGATACCTTTCGTCAAATATACAGAGGATTGTGTTGAAGATTTAGATTTAGAAAATCTTAATATTGAAGAAactaaaaactataatattattgaaagtCCTGTGTCACGATGGTCTAGCGAAAATTCTAGTCCAAAATGCAGTTTCGTTAACAGCCTTCCTTTCAAACTAGTTTGCAACAATACTTCAGCTTTCGAAGCTCAATTTACGAAATTTCTCGAAGCAAACACAGCTAAAACATACGCTACTTTAAACCCTGTTGCTAATAGGAATAAGTCTCCTAGGAGTTTGATTAAGGATAACTTTAAAAAGTTTGATGATAACTACCAGAGAGACGATTTGAGTTACACCCGTGAAGATATTCTCAATATGTTCAAGGATTCTCCCGTTGCTTCTTTACCGTATGAAAATCATGAAAGAAGACATGTTAGGAAAACTGATCCTTCACGGCTTGTACATAAGAACTGGAATGCGAAGCCAACTTACGTTGATATCGGTGGGGTTCTGATTGGTGGAAGTGAGTgccaaatatgttttatatgcGGGGAACATGTTAATAAAAACGCTGATAAGCTATACCTATTTGATAACGAAGACCAAAAGATACATAGGTGTTCCCCGCAAAAGAAGATGTCAACTCAACTGAAAATCATATGCGAAGGGTGTCTTAATGAAAACTTTATGCCGTGTAGATTAAAAAGCGCGAATCAATTTCTAAATCCCGACGAATATTTAGTAATTCGCAACAATCAGCAATACATATTTCAAAAGACGAAGAATTTCAAGTATTGCGGAGCCAAAATCATAGACAAAGAAGTTTTAGATAAAGATGAATTGGTCAAAGTGGAGATAGGGTCTGATGGTGAAATTGTAACGAAACCCATAGACAACGACTCGAGGTCTGAGGACATTATAATTGTAAAAGATGAAATGAGGGACAGTTCTAGTGATGTAGAGATTATTGAGCCTGAATCGGAGATTGATAAAATTGTCGACAACTTGGAGGAAGCTGACGAGGATGTTAAGCGATTCTTGGGGAAGTATTCGTGTGATACTGAAGATTTGAAGGAATTAAAGTGCAGGTTTTGTGAACAAATATTTGCAGCTCTATCAGAAGTGATAGAACATGGTGAAACACATAAGCACAGCTTGGAGGATGGCGAGGTCTATCCTTGTCCTCTATGTAATTATGGTTATGCCAACTTTAAGTGGCTGAAGGGACATCTGAAGGCGGCTCATGACAAACCTGACAAGAATGATGAAGACGACAAAGACAAATCTAAAGATGACATTAAAATAGATATTGAACAGAACACTGCAGTGGAATCATCACCAATAGCAAAACGAACCAGAAGTTCTATCAAAAAATCTGAGAGTGATAAAAATGaaaGTCCCGAGAAGAAAgaagatgataaaaaaatagatgCCAATGCTGAAATGACGGAACGCATAATAAAAACGGAGGTGAAGCAAGAATGCTTGGATTCCAGCGATGATGAGATATGGATCGTGCAGACTGCTGATGATGAAGCGTCCAGGCAGCTGCAGATATTACTTGACGCTGCTAAGgGCAAAGTCAAAGAAAATGATGACTCAAAGAAGACgaataaatgtttaaattgCAGccaaatcataGAGCCAACAGAAATCAGCTCAGCACACAAATGTCTAAGGAGACGCGGAAGAAAACGAAAGACTGCCGGGAAAGATGACAATCTATTGTGCGTACCTACTCAGGAAGATTTCTATAAGAGAGCTCAAGGCAGACCAAGAACTGTTAATGTAAATAACGATTTACTTGTACCGAGAGCTCGCAAGAAAAGGTGCAAGGATGCAAGTTCGGATCCACAAATCGTGACTTGTCACAACTGTAATGAGTCTTTCACGTCGAAAGTTCGACTCAAGTTCCACATGCAATTCCACGAGTCATCAAACATGCTATCGTCTGATGGTCAGTACTCTTGCTATGATTGTGAAAATGCAACTTTCGGCACTGAAACCGAACTGTTCGACCATATACACTTCCAACATGGTAAGCAGAAGAGGTGGCAGTGTCCGGTAGATGGGTGCGCAAAGACCTTTTATCTCAGGGCGACACTAACGAAGCACAGCCGCACGCACACAGACACGCGCCGGTACGTGTGCGTCACTTGCGGTAAGCGGTTCCTCGACAAGCAGACACTCGATGAGCACGGAGTCACACATCTGCAGATAAAGCCGTTCCAATGTCACATCTGCCTGAAGCAGCTGACGCGCAGGTCCCGGCTCCGGATGCACCTGCGAGCTCACCACGAGGAGTTGTCTCCGCGGCTGGTGCTCGTGTGTGCCGTCTGTGGACGCGCCTTCAGGGACCAGGGAGATGCACAGGATCACGCTACGAAATCAACGGAGTGCATAGAAGCTTTTGCCAGCGAGCTGAAAGAAGAAACAGAAGAGGTGACAGTCCAGCTGTCACCCACTAGTGGCCTTGTCAGACATACAGTGCAGATTGTTGAATCCCCAAAACTGTCGAAGCCCATAGAGCGCGAGGTGTCAAGTGGCCTGGGGTCAGCACTAGTGTCGCAGATACCTGACGAGTGCAGAACAATAATACGAGTGGTGGAAATAGAGAAGGCATTCCGCTGCGAGTTTTGTGAGGATGTGTTCTACTTGGAAGATGGGTTGAACAGCCACCGTGTGATACATAAAGGCGTTAAAAACCCATTCACATGCCATATTTGTAAAGTTAGCTTTGCTACTTATTCTAGATGTACGACCCACAAGACTACCCACGGGTTCTACAAGCGGCCCCTGGCGGAGGCCAAGCGGTCGGCGCAGGGGCTGCCCCCCTCCGAGCGGGGCAACCCCCCCTTGCAGTCACACTGCGATACTCACATCCCTATACTGGGCTATGGAGACTTTCCTGTTGTTAAACATTTCTTGTGTGAGGACTGCGGTCGGTCGTATCTCCACTGGACTTATTTGCAAGTCCACCGCCGAATGAAACATGCCAACGAAAACTTCGTTTACAAATGCAATCAGTGTGACGTCACATTTCCTAACAGctggAGCGTGGCATACCATCGGAAGAAGTTACACGGAAAAAGTGGTCAAGATTTTCCTAATCACACCACCAAAATGGCCAGAGAAGACTATAAGATCCCCTGCCGAGATTGCGACGAGGTCCTGCCAAACAAAACTGCACTCTACAAACATAGAAAGAAGGAACACAGTGATATTTCGCTGCGGTTTAATTGTAAACCAAGTGAGACCCCTACATACCCCACTTCAGTGAGTTGCGGCCACTGTGGACAGAGCTTCCCAAACGCGCACGACTTGCACACGCATCTGAAACAAGTGCACTTGCACACGGCGACGCACCCCTGCGCTGTTTGTGCGGCGCACGCGCAGGCTCGagctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtgccggtgctggtgctggtgccGGAGCACGCACTCACGCGTGCCCGGTGTGCGCGCGCGCCTTCCGCACCGCCTCGATGCGAGCTGATCATTTGCGCACTCATACCGATGAGAGACCCTACCCTTGTGATGTCGACAGCAATGCGCAACCACCGGCTGATCCACACGGGCGTGCGCGCGTGGCCGTGCGCCCGCTGCCCCAAGCGCTTCCGCATCCGCTCCGACCTGCGCACGCATCTGCGGCTCAAGCATCCCGCGCACATCGCGCTCATCGAGGTACtacaccaacaccaacatcaACACCAGCATTACCATCAACACCAACAATACCATCAACACCAACAATACCATCAACACCAACAATACCATCAACACCAACAATACCATCAACACCAACAATACCATCAACACCAACAATACCATCAACACAAACATTACCATCAACACCAACAACACCATCCACACAAACATTACCATCAACACCAACAATACCATCAACACCAACAATACCATCAACACAAACATTACCATCAACACCAACAATACCATCAACACCAACAATACCATCAACACCAACAATACCATCAACACAAACATTACCATCAACACCAACAATACCATCAACACCAACATTACCATCAACACCATCGTCAACATCAACAACACCACTAACCGAGTCGATTCACAATgtgGAAGGCTTAAACCCGACACCGGAGGAGGTGATGAAGTACCTAGCCATGAACAACATACCCCAGGACAAGGTTATAGAAATATCCAAGATATCATTTTCGAAGgGTTCCTCAAGTATAATACCGAACAGTGCTCGTGCGTTATCAATGCTGGGAACTGCAACACGCACGCAAATAACTTTTAACCAGCCGCCACCTCTTCAAAATGATGAATTCCAACCCGTACGTCGCGGAAGGGGCATAGCGAAGAACCCACGCAGACCCAAGATACTCCAACGTGGAGGTGATGGAGTACCCCAACCAGAACCGAGCAATTATCCTATAGCTGTCAGCGATACTGGCGAGGAATTATCAGAAATAAATGTACAACTCCTGCTAAGAGATGGCGTCCTGGTCAATGGAAACCAAATGGTACAACTGCAATTAGACGACTCTATGTTAATGGAGTAA
- Protein Sequence
- MEEPHPPLILCMENMSGEEVALPIEPHDDFQTFLNKAKTLLGFDVDINSITRNQPVSLNDNIYQFLITAENTADGALAAQDFDQMLEPNDGSNDLVYILDDGTQIRASQIHFDNEDPPVDLTAEKIPFVKYTEDCVEDLDLENLNIEETKNYNIIESPVSRWSSENSSPKCSFVNSLPFKLVCNNTSAFEAQFTKFLEANTAKTYATLNPVANRNKSPRSLIKDNFKKFDDNYQRDDLSYTREDILNMFKDSPVASLPYENHERRHVRKTDPSRLVHKNWNAKPTYVDIGGVLIGGSECQICFICGEHVNKNADKLYLFDNEDQKIHRCSPQKKMSTQLKIICEGCLNENFMPCRLKSANQFLNPDEYLVIRNNQQYIFQKTKNFKYCGAKIIDKEVLDKDELVKVEIGSDGEIVTKPIDNDSRSEDIIIVKDEMRDSSSDVEIIEPESEIDKIVDNLEEADEDVKRFLGKYSCDTEDLKELKCRFCEQIFAALSEVIEHGETHKHSLEDGEVYPCPLCNYGYANFKWLKGHLKAAHDKPDKNDEDDKDKSKDDIKIDIEQNTAVESSPIAKRTRSSIKKSESDKNESPEKKEDDKKIDANAEMTERIIKTEVKQECLDSSDDEIWIVQTADDEASRQLQILLDAAKGKVKENDDSKKTNKCLNCSQIIEPTEISSAHKCLRRRGRKRKTAGKDDNLLCVPTQEDFYKRAQGRPRTVNVNNDLLVPRARKKRCKDASSDPQIVTCHNCNESFTSKVRLKFHMQFHESSNMLSSDGQYSCYDCENATFGTETELFDHIHFQHGKQKRWQCPVDGCAKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHHEELSPRLVLVCAVCGRAFRDQGDAQDHATKSTECIEAFASELKEETEEVTVQLSPTSGLVRHTVQIVESPKLSKPIEREVSSGLGSALVSQIPDECRTIIRVVEIEKAFRCEFCEDVFYLEDGLNSHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPLAEAKRSAQGLPPSERGNPPLQSHCDTHIPILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFVYKCNQCDVTFPNSWSVAYHRKKLHGKSGQDFPNHTTKMAREDYKIPCRDCDEVLPNKTALYKHRKKEHSDISLRFNCKPSETPTYPTSVSCGHCGQSFPNAHDLHTHLKQVHLHTATHPCAVCAAHAQARAGAGAGAGAGAGAGAGAGAGAGAGAGAGARTHACPVCARAFRTASMRADHLRTHTDERPYPCDVDSNAQPPADPHGRARVAVRPLPQALPHPLRPAHASAAQASRAHRAHRGTTPTPTSTPALPSTPTIPSTPTIPSTPTIPSTPTIPSTPTIPSTPTIPSTQTLPSTPTTPSTQTLPSTPTIPSTPTIPSTQTLPSTPTIPSTPTIPSTPTIPSTQTLPSTPTIPSTPTLPSTPSSTSTTPLTESIHNVEGLNPTPEEVMKYLAMNNIPQDKVIEISKISFSKGSSSIIPNSARALSMLGTATRTQITFNQPPPLQNDEFQPVRRGRGIAKNPRRPKILQRGGDGVPQPEPSNYPIAVSDTGEELSEINVQLLLRDGVLVNGNQMVQLQLDDSMLME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -