Basic Information

Insect: Tethea ocularis
Gene Symbol: -
Assembly: GCA_963555595.1
Location: OY741986.1:2513685-2522685[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.3 1.5e+02 3.6 0.8 1 22 223 244 223 246 0.88

2 10 0.16 10 7.3 1.4 1 23 278 301 278 301 0.96

3 10 0.0036 0.23 12.4 2.2 1 23 344 367 344 367 0.95

4 10 2.6e-06 0.00016 22.4 2.5 1 23 371 393 371 393 0.97

5 10 5.8 3.8e+02 2.4 1.1 2 23 401 421 401 421 0.88

6 10 0.0083 0.54 11.3 2.8 1 21 427 447 427 452 0.94

7 10 2.3e-05 0.0015 19.4 0.8 1 23 460 483 460 483 0.96

8 10 0.00019 0.012 16.5 2.0 1 23 489 512 489 512 0.97

9 10 4e-05 0.0026 18.6 0.3 3 23 524 544 523 544 0.96

10 10 4.9e-05 0.0031 18.3 2.0 2 23 551 573 550 573 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.3	1.5e+02	3.6	0.8	1	22	223	244	223	246	0.88
2	10	0.16	10	7.3	1.4	1	23	278	301	278	301	0.96
3	10	0.0036	0.23	12.4	2.2	1	23	344	367	344	367	0.95
4	10	2.6e-06	0.00016	22.4	2.5	1	23	371	393	371	393	0.97
5	10	5.8	3.8e+02	2.4	1.1	2	23	401	421	401	421	0.88
6	10	0.0083	0.54	11.3	2.8	1	21	427	447	427	452	0.94
7	10	2.3e-05	0.0015	19.4	0.8	1	23	460	483	460	483	0.96
8	10	0.00019	0.012	16.5	2.0	1	23	489	512	489	512	0.97
9	10	4e-05	0.0026	18.6	0.3	3	23	524	544	523	544	0.96
10	10	4.9e-05	0.0031	18.3	2.0	2	23	551	573	550	573	0.96

Sequence Information

Coding Sequence: ATGGACGAATGTCCAGAAATAACGATCAAAAAGCTCTGTTGTACGTGCCTGAGTAGAGACAGAAAATTATTCCAACTTTGCAAGCTTACGGATGGCGTTAATAACTTGTATTTATTGCTCTCTTACGATTCAGAGGCATATAGGGAAGGTTTCTACAAAGACACGGCAAATCTGTTCATATGCTGGGAATGCAGAGCGGTGATGTCCAGGATCAGCAGGTTCAGGATACAGGCATGCAAGGCACAGAAACTGTTGACTTATATTGCTGAAGGACGGACAGACaCAAATTCCCAAACCGACTGCCTCTCACATCTTTCCCGCCATCATAATGCAGCATACACCAAAACCATTATCTCCAAAGCAGATGCATTTATAGACAATTTCATTGATTGCGGTCCAGTCGCCGAAATTAAAACCGAAAGTGATTTAGAAGATGTACCTCTATCTGAACTTCATAACAACTACATATCAGATAATGATTCTAACTATATACCagaaaaaacatataaaaaacgtaaaaagtATCAAGAAAGTAAAGTGAAAAAGAAAAAGCAACCTTTAGTTGGTAGTAATAACAAGTATTTTACAACGACGCGAATGATTGAGACTGAAATGTTAGATAGTAGGGAGAGACGGAAGATGGCTGTTGTTTACGCTGATTCAACATTCAAATGTGAATCTTGTATAGAATGTTATAAGAGTCAAATTGATTTAGATGAACATAATATGGATGTGCATTTGGAGAAAGAAAAACACAAGCAATGTAGTATATGTCTGAGTTATATTACAGAGGTTTCAATACAAGAACATATAGACACACACTATGAAAGGCATATGTGTAGATTTTGCGACTACATGACATACAATTTAGGTGATATTTTGAGACATTTGAAAAGTGGCCATTCTATGAGAAATCTTCGTGTTTCTATTAAAAGGAAAAAGgGCCAAAGAAAAACTCCAGAAGTTGTAAAACCCGGTTCAAAACCGCGACGAAACCAAGCTATGATGGACAAACGGACACCTTACGGATATCTATGTACCGAGTGTAATAAGTATTTTGATAATAAGAATCAAAGATGGAAACACGTGCAGAGATACCACAGGGAGGGGTACAAGTGTACGACTTGTGGCAAACGATTCGCCTTCAAGAATAATCTTACTAGACACGAACAACTCCATCAAGGCCCTCTGCCCCGCGAGGAGTGCACCACCTGCCACAAGATGATCAGGGTGGATCTGGTGAAGATACACTCGAGGATCCACTCCAACAGGGACAAGTTCAGCTGCGTGGAGTGCGCCAAGTGCTTCGTGAGTCGAGCCTCGTATGAACACCATTTGAAGTACACTCAGGCGCATGCTAGCGTTGATATACTCAAgTACAAGTGTTCTATGTGTGACAAGGGGTACCGTTCCCGCGGCGAGCTGAGAGACCACGTCAACTACCAGCACATGGGGAAGACGCAGCACAAGTGTCCTATATGTGGAAAgGCCCTAGCGACTCGCAGATGTATAACGCGCCACGTGCGACGGGCCCACGATGGCGTCAAGGAAAGTGCCAGAGACAAGATCTGTCAGCAATGCGGCAAGGCATTTAGGGATAAGAAGGGTCTTCGCGAACACGAGTTGATACATACAGGCGAGCGGCCATTGTCGTGCGAGATCTGTGGGTGTACCTTCAGACAAAGCGCATCACTATACACGCATCGCAAGCGTGTACACAATATACACCCGCAGCGTCGGACCGTGGAGCTTCTCGATGTATGA
Protein Sequence: MDECPEITIKKLCCTCLSRDRKLFQLCKLTDGVNNLYLLLSYDSEAYREGFYKDTANLFICWECRAVMSRISRFRIQACKAQKLLTYIAEGRTDTNSQTDCLSHLSRHHNAAYTKTIISKADAFIDNFIDCGPVAEIKTESDLEDVPLSELHNNYISDNDSNYIPEKTYKKRKKYQESKVKKKKQPLVGSNNKYFTTTRMIETEMLDSRERRKMAVVYADSTFKCESCIECYKSQIDLDEHNMDVHLEKEKHKQCSICLSYITEVSIQEHIDTHYERHMCRFCDYMTYNLGDILRHLKSGHSMRNLRVSIKRKKGQRKTPEVVKPGSKPRRNQAMMDKRTPYGYLCTECNKYFDNKNQRWKHVQRYHREGYKCTTCGKRFAFKNNLTRHEQLHQGPLPREECTTCHKMIRVDLVKIHSRIHSNRDKFSCVECAKCFVSRASYEHHLKYTQAHASVDILKYKCSMCDKGYRSRGELRDHVNYQHMGKTQHKCPICGKALATRRCITRHVRRAHDGVKESARDKICQQCGKAFRDKKGLREHELIHTGERPLSCEICGCTFRQSASLYTHRKRVHNIHPQRRTVELLDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01083713; iTF_01417199; iTF_00007553; iTF_01252297; iTF_00762031;
90% Identity: -
80% Identity: -