Basic Information

Insect: Tethea ocularis
Gene Symbol: -
Assembly: GCA_963555595.1
Location: OY741986.1:2539531-2553590[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0097 0.63 11.1 0.3 1 23 209 232 209 232 0.95

2 11 0.0039 0.25 12.3 3.1 2 23 240 261 239 261 0.97

3 11 0.0096 0.62 11.1 0.8 1 19 265 283 265 288 0.96

4 11 9.7e-05 0.0063 17.4 1.4 1 23 325 347 325 347 0.98

5 11 0.006 0.39 11.8 1.3 3 22 359 378 358 382 0.89

6 11 0.00054 0.035 15.0 1.4 1 23 423 445 423 445 0.97

7 11 0.058 3.7 8.7 0.4 2 21 454 473 453 478 0.90

8 11 1.6e-05 0.001 19.9 0.2 1 23 486 509 486 509 0.95

9 11 0.00027 0.017 16.0 3.7 1 23 515 538 515 538 0.96

10 11 3.4e-05 0.0022 18.8 1.0 3 23 547 568 545 568 0.91

11 11 0.32 20 6.3 1.8 1 23 574 597 574 597 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0097	0.63	11.1	0.3	1	23	209	232	209	232	0.95
2	11	0.0039	0.25	12.3	3.1	2	23	240	261	239	261	0.97
3	11	0.0096	0.62	11.1	0.8	1	19	265	283	265	288	0.96
4	11	9.7e-05	0.0063	17.4	1.4	1	23	325	347	325	347	0.98
5	11	0.006	0.39	11.8	1.3	3	22	359	378	358	382	0.89
6	11	0.00054	0.035	15.0	1.4	1	23	423	445	423	445	0.97
7	11	0.058	3.7	8.7	0.4	2	21	454	473	453	478	0.90
8	11	1.6e-05	0.001	19.9	0.2	1	23	486	509	486	509	0.95
9	11	0.00027	0.017	16.0	3.7	1	23	515	538	515	538	0.96
10	11	3.4e-05	0.0022	18.8	1.0	3	23	547	568	545	568	0.91
11	11	0.32	20	6.3	1.8	1	23	574	597	574	597	0.93

Sequence Information

Coding Sequence: ATGGATACTGAAGAAAACAGTTTATGTTGCGGCTGCCTCTGCGCTGGACGCAAACTGAAATCGCTAGATGAATTCTGGAAAAGGCagtgttttttggaaataatcAATGAATTACATATTGCACAGCCGGGTCTACCAGTGTTAATATGTTTCGAATGTGAAGCAAACATCGTCCGCTTCATAAAATTCAAGCGTCAAGTGAAGATATCGTACAAAACTTTACATCGTTATGCTAAACTGAATCTCAATATAAATGATATACAGAACATACCAAGATTACGTATACACAATGTAGTAAACATAACGGTACCTGATCCACATGAAAATAATACCATTATTAACCATAAAACATTTAATCATGATGAAGCAGAAACAAAATCAACCGAAATagatataaaagaagaaatagATGTATCATTTCATTcggatattttatattattcagaTGATGATAAAAGCCTTCTAGAAATAagtaagaaaaagaaaaaggttATGAATGGTAGAACGAAGAAGAAAAAGAAACGAAAAATCAAAGAGGTGTATAAAGAAGTTATGTTGAGTAAAGAAGAATTATTGGAGGAAAGAAGACTGTTACGGTTGAGAGATGAATACGTAAATGCTATGTTTTGCTGTGAAATGTGTATAGTTTCATTTCCTAATGCGGATGACTTGAAGGATCATATAAGTATTAAACATGAAAAGAATGCCGCACACCTTAAATGCGACATATGCCAATGCTCGTTTAGTTCCGAAGTATCGTACAACTACCACACGAACAAACACACGCGCCGGTATCAGTGCGCCGAGTGCGACGCGAGGTTCGCCAGCAAGCGAGACGTAAATAAACACTGTGACGCTGCACATTTTACTAGTATAAATGCAGAATACAGCATGAAATTCAAACCAAATGACAATGGTATAATCGTGGATTCAAAGGAGCTGGATGTTAGTACAAAAGCCGACACACCATCTTTTCCATGCGAATTTTGCGAGAAGACGTTCAGGTGGAAAACGTCTTTACGTAAGCACATAGAGACGCATCGCATCGAGAACGGACAGAAGAGGAAGCCTTATTGTGAACCTTGCCGATTGACATTTACAACTACCTCCAACCTGCAGAAACATGTGAAAACAAGTTCCAAACATCAAATACAGTTACAACTTTGGAAGCTAAAAGACTCTCTCCCAGAAGACGGGACGAGCTTGGAAAAGCATCAAGCACACATAGAACAGATCAAATGTTCGATAAATAGTTCACGTGAACAGTTCCCCTGTCCGCAGTGCGACAAGAAGTTTCAGTGGCGAGGGAACCTTCTGAGACATCTGCATAGTCATGCGGCCAGGGCTAACGGCGAATTAGTATGTGAACCGTGCAACCGAAAATTTTCATCTATAGCTACGTTCAAACAGCACATGGCTATTAGCAAGAAACATGTCACCGAGAACGAACTAAaTTACGTATGCGGTGATTGTGGGAAGAAATTCGCGAACAAAACTCGTCTCAGAGATCACGTCAACTGGGAACATCTCAAGATCTACGTCCATAAGTGTCCGGTGTGTCAGAaggccTTCAAGACTCACACTTCATTGTACTTACATAAGCAAGTTGTACATAAAAAAGGCAGCGCCGAACACTTGTGTGATCATTGTGGAAAACCTTTCCCAaaTCAAGCAAAACTTCGCAGTCACATAACGGCAATACACTCTGGTGCATCTCCATATGCGTGTGGCGCATGCGCGGCGCGGTTCAGCTGGCACTCGTGCCTCTCGCGGCATATGCGTAGAGTTCATAATGCAGCTAGGAAACGACATGCAACGCCGGAAAACGTGCAAGGATAA
Protein Sequence: MDTEENSLCCGCLCAGRKLKSLDEFWKRQCFLEIINELHIAQPGLPVLICFECEANIVRFIKFKRQVKISYKTLHRYAKLNLNINDIQNIPRLRIHNVVNITVPDPHENNTIINHKTFNHDEAETKSTEIDIKEEIDVSFHSDILYYSDDDKSLLEISKKKKKVMNGRTKKKKKRKIKEVYKEVMLSKEELLEERRLLRLRDEYVNAMFCCEMCIVSFPNADDLKDHISIKHEKNAAHLKCDICQCSFSSEVSYNYHTNKHTRRYQCAECDARFASKRDVNKHCDAAHFTSINAEYSMKFKPNDNGIIVDSKELDVSTKADTPSFPCEFCEKTFRWKTSLRKHIETHRIENGQKRKPYCEPCRLTFTTTSNLQKHVKTSSKHQIQLQLWKLKDSLPEDGTSLEKHQAHIEQIKCSINSSREQFPCPQCDKKFQWRGNLLRHLHSHAARANGELVCEPCNRKFSSIATFKQHMAISKKHVTENELNYVCGDCGKKFANKTRLRDHVNWEHLKIYVHKCPVCQKAFKTHTSLYLHKQVVHKKGSAEHLCDHCGKPFPNQAKLRSHITAIHSGASPYACGACAARFSWHSCLSRHMRRVHNAARKRHATPENVQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01417209;
90% Identity: -
80% Identity: -