Basic Information

Insect: Tethea ocularis
Gene Symbol: Znf296
Assembly: GCA_963555595.1
Location: OY741986.1:883909-894440[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00054 0.035 15.1 1.8 1 23 263 285 263 285 0.98

2 11 2.2 1.4e+02 3.7 1.2 1 23 292 315 292 315 0.93

3 11 0.0088 0.56 11.2 2.6 1 23 346 368 346 369 0.95

4 11 0.00034 0.022 15.7 0.5 1 23 373 396 373 396 0.96

5 11 0.0017 0.11 13.5 0.1 1 20 408 427 408 429 0.95

6 11 0.0047 0.3 12.1 0.1 3 23 442 462 441 462 0.96

7 11 0.022 1.4 10.0 1.3 2 23 469 491 469 491 0.94

8 11 2e-05 0.0013 19.6 0.9 2 23 510 531 509 531 0.97

9 11 6.6e-06 0.00042 21.1 0.8 1 23 537 559 537 559 0.98

10 11 6.7e-07 4.3e-05 24.2 1.5 1 23 565 587 565 587 0.99

11 11 1.1e-06 7.4e-05 23.5 3.0 1 23 593 616 593 616 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00054	0.035	15.1	1.8	1	23	263	285	263	285	0.98
2	11	2.2	1.4e+02	3.7	1.2	1	23	292	315	292	315	0.93
3	11	0.0088	0.56	11.2	2.6	1	23	346	368	346	369	0.95
4	11	0.00034	0.022	15.7	0.5	1	23	373	396	373	396	0.96
5	11	0.0017	0.11	13.5	0.1	1	20	408	427	408	429	0.95
6	11	0.0047	0.3	12.1	0.1	3	23	442	462	441	462	0.96
7	11	0.022	1.4	10.0	1.3	2	23	469	491	469	491	0.94
8	11	2e-05	0.0013	19.6	0.9	2	23	510	531	509	531	0.97
9	11	6.6e-06	0.00042	21.1	0.8	1	23	537	559	537	559	0.98
10	11	6.7e-07	4.3e-05	24.2	1.5	1	23	565	587	565	587	0.99
11	11	1.1e-06	7.4e-05	23.5	3.0	1	23	593	616	593	616	0.98

Sequence Information

Coding Sequence: ATGGAGGATTTAATGGCATGCCGCGTTTGTCTCGCTACGGACGTTACTCTGTTCAACATATTCGCGCATCGTTTGCACAATGCTTTTGAGATACTTACTGGAAAAGAAaTAGCCTTGACAGATGCTTTCCCAAAGCATATATGTAGTTGCTGCATGATGCTACTCAAAAAGTGCGTCTATTTCAAGAAAATGAGCACAAAAGCACAGATTCTGCTGAAAAATGCTCACCAAAGTAACCATGTTATAACAACAGACTACATACGCAGCATAGACAAGACAGCTCATAAACTAACATTCTTCACCAAATCACCGTTAGAAATAATAGACTACCCCCAATTAGATATAAAGGATGAATATGATACCAAAGACAAAATATCCATagatattatagatataaaacaAGAGAATGATCATAGTGACGAGGAGCCTCTATCTAAGAAAgtgaagaaaaaaaagaaacggAAAAAGAAGGATAaggatatatttattaaaatagaaaataatgagCTGAAATTGAGCGATACTCATGATGATTTAGAGTTTAAGGTTGATTTAGACTTTAATGATTCTCAGAATGAATTAGAATTTAATCATATGGCAGATAATGATACAGATTTGCAAGATATATCAAATGATAATGATACAGAAGTAGTTTTGACTAGAAAaaaagataatgataatgatttgATAAATGATAATGATATAGAAGTTGTAGTTTTGACTAGAGAACAGCAAATTGAAGAAGTGCAGGCTAGGAGACAGTCATATAATTATAGGAATTCATTTTACAAATGCGAGAAATGTTTCAAAGGATTCATATCTGATGGGACGTACCAGAATCATATGACGAGACATGACATTAAAAGCGGTCCGCACACATGCGACATATGCCTCACCCGATGGCCAGATCACCGTTCCTTACGGGCCCATAAAATCATATCACACGAACGGAAATTCATTTGCAAAATATGTGACCATGTGACCAAGTCCCACCATAGGGCTAAGGAGCACTGTAAATGGCATTTCGGGTTCAAATTCGAATGTAAAGCGTGCGGATCTACCTTTGCGAAGTCCACAAGTTATTTTACACATGTGAGATTGCACCATCCTTCGACTCATAGTTGTGATGTCTGCGGAGAATCGTTCATCGGTCAAACTGGACTGAATATGCATAAAAAGAAAGCTCATAGAAATGTAGAGAAGATCaaactaaaaattgaatatCAATGCGCAAGATGCGGAGTTCAATTCAAAAATATGGACGCTCTAAAACAACACTTAAGCTTAGCCCAGGACGATATATGTGATACAAAATTAAGGCCATGTGTGGTTTGCGGTCTCAGCTTTGCTAATGGAGACGAGTTCAGTAAACACGCCAAAAGCCATCAGAATCGCATCGCGGCGAGGTGCGAACTGTGTGACAGAAATTTCGCTCATGAAAGATCATTTGCGATTCACAATCAAAGGGTACATCTGGGGCTCaaacataaatataagaaacaaGATTTGAAGAGGAAAGCTGTGGTCGTCTGCGAAATATGCGGGAAGAAATGTATTTCGAAGGCAACGTTAGTGTACCATCAAAGAACGCATACAGGAGAAAAACCATACAACTGCACAGAATGTCCAAAAAGCTTCAGCGTTTACCAGAGATTACAGattCATATACGCACACATACAGGGGAGCGGCCATATAAATGTTCAAATTGTCCAAAAGCATTCAAGCACAAAGCGGCTTTGAACCGACATGGTCGAgtACACAGCGGTGAAAAGCCTTATCAATGCTCACATTGTGGCAAATCCTTCTCACAATCTAATTCAATGAAACTTCACGTAAAAACTGTACATTTAAAAATGCCTGCGCCTTACAGAAGTAggcgtaataaaattaatgaataa
Protein Sequence: MEDLMACRVCLATDVTLFNIFAHRLHNAFEILTGKEIALTDAFPKHICSCCMMLLKKCVYFKKMSTKAQILLKNAHQSNHVITTDYIRSIDKTAHKLTFFTKSPLEIIDYPQLDIKDEYDTKDKISIDIIDIKQENDHSDEEPLSKKVKKKKKRKKKDKDIFIKIENNELKLSDTHDDLEFKVDLDFNDSQNELEFNHMADNDTDLQDISNDNDTEVVLTRKKDNDNDLINDNDIEVVVLTREQQIEEVQARRQSYNYRNSFYKCEKCFKGFISDGTYQNHMTRHDIKSGPHTCDICLTRWPDHRSLRAHKIISHERKFICKICDHVTKSHHRAKEHCKWHFGFKFECKACGSTFAKSTSYFTHVRLHHPSTHSCDVCGESFIGQTGLNMHKKKAHRNVEKIKLKIEYQCARCGVQFKNMDALKQHLSLAQDDICDTKLRPCVVCGLSFANGDEFSKHAKSHQNRIAARCELCDRNFAHERSFAIHNQRVHLGLKHKYKKQDLKRKAVVVCEICGKKCISKATLVYHQRTHTGEKPYNCTECPKSFSVYQRLQIHIRTHTGERPYKCSNCPKAFKHKAALNRHGRVHSGEKPYQCSHCGKSFSQSNSMKLHVKTVHLKMPAPYRSRRNKINE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -