Basic Information

Insect: Tethea ocularis
Gene Symbol: -
Assembly: GCA_963555595.1
Location: OY741964.1:8513814-8520466[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.032 2.1 9.5 7.4 1 23 212 235 212 235 0.97

2 12 0.0036 0.24 12.4 1.0 3 23 244 264 242 264 0.92

3 12 9.6e-05 0.0062 17.4 3.9 2 23 271 292 270 292 0.97

4 12 6.9e-05 0.0044 17.9 1.2 1 23 298 320 298 320 0.98

5 12 5.4e-05 0.0035 18.2 1.5 1 23 329 351 329 351 0.96

6 12 7e-06 0.00045 21.0 2.3 2 23 358 379 357 379 0.96

7 12 0.00083 0.053 14.5 7.0 1 23 385 407 385 407 0.98

8 12 6.9e-09 4.4e-07 30.5 1.3 1 23 413 435 413 435 0.99

9 12 2.3e-06 0.00015 22.5 1.7 1 23 441 463 441 463 0.99

10 12 0.00062 0.04 14.9 0.8 1 23 469 490 469 490 0.96

11 12 0.0061 0.39 11.7 0.3 1 23 496 518 496 518 0.95

12 12 4.1e-06 0.00026 21.7 2.9 1 23 524 546 524 546 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.032	2.1	9.5	7.4	1	23	212	235	212	235	0.97
2	12	0.0036	0.24	12.4	1.0	3	23	244	264	242	264	0.92
3	12	9.6e-05	0.0062	17.4	3.9	2	23	271	292	270	292	0.97
4	12	6.9e-05	0.0044	17.9	1.2	1	23	298	320	298	320	0.98
5	12	5.4e-05	0.0035	18.2	1.5	1	23	329	351	329	351	0.96
6	12	7e-06	0.00045	21.0	2.3	2	23	358	379	357	379	0.96
7	12	0.00083	0.053	14.5	7.0	1	23	385	407	385	407	0.98
8	12	6.9e-09	4.4e-07	30.5	1.3	1	23	413	435	413	435	0.99
9	12	2.3e-06	0.00015	22.5	1.7	1	23	441	463	441	463	0.99
10	12	0.00062	0.04	14.9	0.8	1	23	469	490	469	490	0.96
11	12	0.0061	0.39	11.7	0.3	1	23	496	518	496	518	0.95
12	12	4.1e-06	0.00026	21.7	2.9	1	23	524	546	524	546	0.98

Sequence Information

Coding Sequence: ATGGAACTCGAAACACCTTCCATATTACCAAAGGACGAAATACAAAATGCTGTGAATGAGTACGTTGAAATCGAAATACCTTTCGATTTATTCCATTACCTTAGTTCTAGTGAGTGTAATATACAAAGTGTGTGTCGAATATGTCTGTCTCCTAATAATAGTGTAATGTTTGGATTGTTATCAACCAAAGAAAACAATGTATTGGGTGAAATGTTTAAAGCCTTGACATCAATCCAGGTGTTGGCTGAAGATGGTCTGCCAGCATTTATTTGTGAACCATGTCATATTCAAGTGGTTCATTGTTATGAGTTCAAAAACAAATGTGAGAAGTCTGATTATGCATTGAAGTCTGTGCTGAAGGGAGAATTTATTACCAAAACTGAAAagatttatgaaaatgtaatAGAACCTAATGAAACaaccaaagaaatattttcCACAGATATTAAAATCAAAGAAGAAACGGAATTGCAAGAAgATATTCAATATTTGGAGAATCTAGAGGATATTAGCAATGACAATCTGTGTATTGTACAAAATACTGCTAAAAGAAAAAAgAAAAGGCTAGATATAACTTTAACAGatTCAAATTCACTTTTAAAAGAGTGTGTATCtggaaagaaaaacaaatacttCACATGCACATTTTGTTCTAAGAATTTCCATAAAGCTAAAACATTGCATaatcacataaataaaaaccatgTAAAATCAAATGAGCCTTACGGTTGCAAGCAATGTAATCAATCATTTAGTTCTGAACATGATCTGTTGGTGCACTCAGCTTTACATACGAAGGGATCCACTTGGCGTTGTAACCAGTGTCACAAGGAATTTAATGgcAAGTCAAGGCTGCGAAGACATATCCAAAGGCACATGGAATCGAAACCATTCTCATGCGAGACTTGTGGAAAGATGTTCATAGAAATGTGCGCACTGCGCCGTCACGTGCGCGTCCACACTGGTGAAATAGTCGAGAAAAAACATGCCTGCCATCTCTGTGATAAACGGTATAGTGAAAGTAGCCAACTAGCAGTACACATAGCACGGCACAGCGGCTCGCGACCGTGCACGTGTACAGTGTGCGGCAAGAGCTTCCCCACGCCGCGGCACCTCGCCTCCCACCGCCTCGTGCACAACGACGCCAAGCCTTACCCCTGCCTCTACTGTGACAAGAGATTCCGTCACGAGTCGACTCGGAACACCCACCACCGCACCCACACCGGGGAGAAGCCGTACGTGTGCTCCTTCTGCGGCAAGACGTTCATACAGAACTCTAATCTCACTCTGCACATGCGTACACATACAGGTGAACGTCCATATTCTTGCAATAAATGCGATCGTAAATTCACGTCAGGATCTTCGCTTAAAGCTCACGAGCGCACACACACAGGCGAGCGGCCTTACAGCTGTAATATTTGTGGGAAAAGGTTCGCACGTATGAACATGAAGGGGCACATGCGGCTGCACACGGGCGAGCGGCCCCACGCGTGCGGCGCCTGCGAGAAGACCTTCGTGTCCGCCTGGAGGCTCAGGGACCACGAGAGGATGCACACAGGTGAAAGACCATTCGAATGTGCGACCTGCACAAAGAAATTCCCATCGAGGTCACATCTAGTGAAGCACATAAAAACACACCAGGTAAAGAGAAATAAGGGTCCGCCAAGAGATTTGGTAATCGTTCGAAATAACTTCGTATCCACTACCGATACTATTGGCTGTAAGGAACCTAATCGTGACCAAACCTTAGAGCAAACTCTCAATGCAACTGATGAAGCCATTTGTGAACCAATCACCAATAGAGATTTTGAAACTCAGGAAATTCCAATGGAAGTATCTGGAGAATTAGTACTTCAGGacgatagtaataataaaacagaattaTTAGTTGTTGATAACAGTAAGACGGAAGCTGTATGTTTGAATGGGATCAGTGCAATTAATGACATTAATTATTCTAATGATGTGAATTTAATGACGGTAAATGAGGGTGGAGTGAGCATTTCCTCGTCTGCCGCCATGTTGGAAGGAGCTACAGTTAAACTTTACCAGTTAGACCAAAGTTTAGTGCAAATACATAGTTCTGGAGGGCAAGTGACGATTAGTAAAATTACTAGTAAAATGACTgcaaatttttaa
Protein Sequence: MELETPSILPKDEIQNAVNEYVEIEIPFDLFHYLSSSECNIQSVCRICLSPNNSVMFGLLSTKENNVLGEMFKALTSIQVLAEDGLPAFICEPCHIQVVHCYEFKNKCEKSDYALKSVLKGEFITKTEKIYENVIEPNETTKEIFSTDIKIKEETELQEDIQYLENLEDISNDNLCIVQNTAKRKKKRLDITLTDSNSLLKECVSGKKNKYFTCTFCSKNFHKAKTLHNHINKNHVKSNEPYGCKQCNQSFSSEHDLLVHSALHTKGSTWRCNQCHKEFNGKSRLRRHIQRHMESKPFSCETCGKMFIEMCALRRHVRVHTGEIVEKKHACHLCDKRYSESSQLAVHIARHSGSRPCTCTVCGKSFPTPRHLASHRLVHNDAKPYPCLYCDKRFRHESTRNTHHRTHTGEKPYVCSFCGKTFIQNSNLTLHMRTHTGERPYSCNKCDRKFTSGSSLKAHERTHTGERPYSCNICGKRFARMNMKGHMRLHTGERPHACGACEKTFVSAWRLRDHERMHTGERPFECATCTKKFPSRSHLVKHIKTHQVKRNKGPPRDLVIVRNNFVSTTDTIGCKEPNRDQTLEQTLNATDEAICEPITNRDFETQEIPMEVSGELVLQDDSNNKTELLVVDNSKTEAVCLNGISAINDINYSNDVNLMTVNEGGVSISSSAAMLEGATVKLYQLDQSLVQIHSSGGQVTISKITSKMTANF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00761901;
90% Identity: -
80% Identity: -