Tocu021867.1
Basic Information
- Insect
- Tethea ocularis
- Gene Symbol
- -
- Assembly
- GCA_963555595.1
- Location
- OY741985.1:3667759-3673608[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.0009 0.058 14.4 3.9 1 23 57 79 57 79 0.97 2 30 0.65 42 5.4 0.6 2 23 107 129 106 129 0.89 3 30 0.016 1 10.4 1.6 2 23 150 172 149 172 0.93 4 30 0.5 32 5.7 1.1 1 20 177 196 177 198 0.92 5 30 2.8 1.8e+02 3.3 3.5 1 23 220 243 220 243 0.92 6 30 0.028 1.8 9.7 0.1 2 23 272 294 271 294 0.92 7 30 0.14 9.2 7.4 0.4 3 23 345 366 344 366 0.96 8 30 0.047 3 8.9 1.4 1 23 370 393 370 393 0.93 9 30 4.9e-05 0.0032 18.3 1.4 1 23 430 452 430 452 0.97 10 30 0.0012 0.078 13.9 0.0 2 23 480 502 479 502 0.94 11 30 0.017 1.1 10.3 0.2 2 23 523 545 522 545 0.95 12 30 0.00065 0.042 14.8 5.0 1 23 550 572 550 573 0.96 13 30 0.18 11 7.1 2.7 1 23 577 600 577 600 0.89 14 30 0.2 13 7.0 4.9 2 23 603 625 602 625 0.96 15 30 2.3 1.5e+02 3.6 0.6 2 20 631 649 630 651 0.92 16 30 0.00021 0.013 16.4 2.2 1 23 704 727 704 727 0.96 17 30 0.011 0.72 10.9 1.8 1 23 781 803 781 803 0.94 18 30 0.0033 0.22 12.6 1.7 1 23 873 896 873 896 0.96 19 30 1.4e-05 0.00088 20.1 0.3 1 23 901 924 901 924 0.96 20 30 0.018 1.2 10.3 1.2 1 23 929 952 929 952 0.96 21 30 0.00071 0.046 14.7 3.2 2 23 955 977 954 977 0.94 22 30 0.031 2 9.5 1.6 2 22 984 1004 983 1004 0.95 23 30 0.33 21 6.3 0.7 1 23 1061 1084 1061 1084 0.92 24 30 0.17 11 7.2 0.1 2 23 1156 1179 1155 1179 0.93 25 30 7.7e-06 0.0005 20.9 0.5 3 23 1186 1207 1185 1207 0.94 26 30 0.0069 0.44 11.6 3.6 2 23 1212 1234 1211 1234 0.95 27 30 0.0033 0.21 12.6 3.8 1 23 1239 1262 1239 1262 0.95 28 30 4.8e-05 0.0031 18.3 5.9 1 23 1266 1289 1266 1289 0.97 29 30 0.0011 0.069 14.1 1.0 2 23 1296 1317 1295 1317 0.96 30 30 0.00019 0.013 16.4 0.4 1 23 1323 1345 1323 1345 0.97
Sequence Information
- Coding Sequence
- ATGATTACCAGTAACCCGGAGGCTAAAGCGACGGTGACTTCGCTCACTACATATAATAAACCAGAAGAACCGAAGGCCCGTTCACAACGGTTAAAAGTAACAAGACGCAGTAATCTAGGGACATTATTCCAGAACACAAGTGTTATACCTTTCAAGTGGAAAAACTTGTTCATATGTTTTTACTGCGGCAAACACACGAACGATTACGAAGAATTGAAAAAGCACACAAAATCCCATGGAAAATGCACTCTGAAAGAACATTCCTTCAAGAAACTGTCTGCTATAAAACACGACGTTAAAGTTGATGTATCAGAATTGGTTTGTAACATCTGCGACTCTTGTTTCGTTTGCCTGGACGACTTAATCGATCATTTAATTGACGATCATTCGTTAATATACGACAAAGATATTTTTATGCACATGTGGCAGTTTGCATTGCGCTCTATGAAATGCCATGAGTGTGACGAGAAATTTGTATACTATTCATTTTTCATATCTCACGTTTTAGAGAAGCATCCGTTGAATAGCTTTAAATGTGAGCACTGTGACGATTATTTTGACAGCCAAAAGGATTTAGATTACCATAAAATACTAGATAATATCGGATATGTTCTTAATATGTCTACGGCGATACCTTTCAGGCATAACAAACGTCGATTTCGCTGTTTCCATTGTACATCGGAATTTGAAGAATTTAATTTGTTGAAGAAACACACTTCGGCTAGTCATAAGAAAGGAGATCTCAAGAAGCAGGGAGGCGTAATGGAAATTAGACGTGAAAGTTATAGTGTATTCTTCGATATCAACGATCTGTCCTGCACAGTTTGCAACAAAtcatttgaaatttttaatgatttaatcgACCATTTAGTTTCGGAACACGACGCAAAGTACAACAAAACTGTTAAAAACACCTTCATTCCTTTTAAAGTAGGTGAAGATAACGTTGTATGCTGTTCTTGTGATACTGAGTTTACCGGATTATCGATTTTCGCACACATTAATGCTGTCCATTTTAATGAATCTGTTCTTTGCGGGTTCTGTGGGTTACTTTTGAATGATGAAGCTCATCTTAAATCCCATATGTTAATGTATCACAATGGGGCTCATGTATGCAGTGAATGCTACAAGGAGTTCGGATCAGATTACCAGTTGAAACTACACGAATATAGAATTCACGATGAAAACGAGCCCTCAAGAGCGTTCAGTGCCAATTACGCCAGGAGACAAAACCTACAAATATTATTCAACAATACATCTATGATTCCTTTCAAATGGCGTGGGAAATATATGTGCTTTTACTGCGGCGAGGATTTCAATGACTATAGCAGTCTTAGGAAACATACGAAGGGTCACGGCACCTGTTCAAACGACGACCGCGCGATAAAACTAATCAAAGCTTTTGACAGCGAAGTTAAAATCGATGTATCAGACATTACATGCGAAATTTGTGGCGAACCATTTACTAATTTCGACGAAATGGTCACCCATTTGATGTTAGATCACAATCTGCCTTATAATAAAGATGTAGATTTGATGATAGCGACTTATAGGTTGGTCGACCTTAAATGTCTGATTTGTGACGAAACTTTCGACTATTTTCGTAAACTAGTCATTCATGTGAATATTAGTCATCCGGAGAAATGTTTTCAGTGTCATTATTGCGATCAGATATTCAATAAGAAGAGAGACTTGGACTCGCACGTTAGGCTTCACCATAAGAAAGAGTACACCTGTTTGAAGTGTACTCAAAGTTTTCCAACAAATAAAGCTTTACAGTTTCACAGATCGCACGCCCATGTGTCTACGTGCAATATTTGCTTCCAAACATTTTCATCGCACAATAAAAGattaaaacatttgaaaaaagaCCATATCATTGAGGGTACCAAATGTGGATTCTGTCTCAAAACCTTAGCTACAAGGCAGGCCTTTTTCCGTCACGCCTCGAAATGTAACGCTAAGGGAGAATTTACATCTCCCAATGAAAGGGTAATCGTAGATGATGGAGATGATGATAAGAAAAAGTCTATAAAAGTGATCAGGAGTAATATCGCTTGCGTTCTTAATATGTCCACTGCTGTACCCTTTAAATATTTCCTAAATAAGTTCAGGTGTTTCTACTGTCCTAAAGATTTCTCAGATTGCGACGATCTTAAAGAGCACACGGTAACCGAACACCCGCACTGTGATATTAGGTTAAAATCAATGCGTTTGCGTCATAGATACGaagGTGAATATCCAGGCCCGTTCCAAGGGTGTACCTCAGAGAAACGGCGCAAAAACCTGCAAATACTCTTCAACCATACCACAATCATGCCGTTTAAATGGCGCGGAAAATATCTGTGCTTTTTTTGTGGGAAGAGCTACGCAGAATACACGGAATTTAAAAAGCACACCAAAGCCCATGGTCCTTGCACCACGAAAGATCATTCCTTAAAATATATCAAAGGCAACCATATCGAGATTAAAATCGACGTTTCCGATATTGCTTGCGAGATTTGCAATGATCTTTTCGTATCGTTCGATGAGATAATAGATCATTTAATCGATAAACATAACCTggattataacaaaaatatcgatataccTTATCAGGAATATAGGCTGGTCGATTTCCGATGTATGCACTGCGGGGAACAGTTTTCGTACTTCGCATATTTAGTCAATCACGTTAATAATATGCATCCTAAAAATAGTTTCATATGCGACGACTGTGGAATAACTTTTAATAAGAAGAGGGATCTGTCTGTACATATAAGGAATTTGCACCGACACGGCGGTTATCCGTGTGAACAGTGCCCACAGATTTGTGACTCGTATTTCACTTTGCGTCAACACCAGAATAACGCTCATTTTTGCAAGTGCAACAACTGCAGTCTAAGATTCGCCACTCAAAAGCTTTTACGAAAGCATATTCAATTAGATCACCCCGAAAGTACAGATTTGAAATGCAGTTACTGCTCCAGCGAGTTCCATACTTCGCAAGGATTGAAACAGCACATTAGGAAATGCAAAGTTAGACTGATAGCGCAAGTCGACGCGACTAATATATCGTTCCCTGTAGAGAATATTCTTGGAGTAGAAccgaaaaagaaacaaaacgtCTTACAAATAAGGCAGAATATCATATGTGTGCTAAACATGTCGACAGCTATACCTTTCAAATTCTTTTCTAAATTCAGCTGCTTTTATTGCAGTCAAAAGTTTGTTGAATACGAAGTGTTGAAGGAGCATACAATTTTGGAGCATCCCGTGTGCGATTTGAAGTCAAAATGCATGAGGAAATGCAGAGGGGAACGGATCACAGTGAAAATTGACGTTGCGTGTTTAGCTTGCAAAGTGTGCTGCCTACCGATGCACGACTTAGACTCTTTCATTGACCACATCATATCAGAACATAAAGCGAACTACGATAAATCTATTATATGTCTAGAGCCTCATCGAATAATTAAGGACAATATGCCGTGCCCTTTATGCCCTGACGTCACATTTCGGTACTTCACCACATTATTACGTCACATGAATTTAGAGCACAATAACAACAATCGAATTTGCGATTATTGCGGCAAAAGTTTTCGCACGGTGACCAATTTGAAAGTCCACATATCATATACGCATACAAAGTCGAGTGAATGCGCCGACTGTGGCGTTAAATTTAAGAATCAGTGGTGCTTATCGCGCCATAGGGCCAGATGTCACAATGTGAAAGATTTTAAATGTCCCAAATGCCCTGAACAATTTGAATCTCAGTACCATAAGCAGAAACATTTGATACATGCTCACGATATTGGTCATAAATGCTcgtattgtaataaaatgttcACTAGAAATTCGTTTATGAAGGATCACATTCGCCGTACTCATTTGAAAGAGAAAAATGTTCCATGTTCGGTTTGCAACGAGAGATTCTTTGATAATCATTTACTTCGGATGCATATGGTTAAGCATAAGGGGGAGAGGAAGTTTATTTGCGATGTATGTGGGAAAGCTTTTTTGAGGCGAAGCAATTTGAGTTCTCATAAGgaaatgcataaaaaatatggGCATGTACCGTTGCAAGTTTAA
- Protein Sequence
- MITSNPEAKATVTSLTTYNKPEEPKARSQRLKVTRRSNLGTLFQNTSVIPFKWKNLFICFYCGKHTNDYEELKKHTKSHGKCTLKEHSFKKLSAIKHDVKVDVSELVCNICDSCFVCLDDLIDHLIDDHSLIYDKDIFMHMWQFALRSMKCHECDEKFVYYSFFISHVLEKHPLNSFKCEHCDDYFDSQKDLDYHKILDNIGYVLNMSTAIPFRHNKRRFRCFHCTSEFEEFNLLKKHTSASHKKGDLKKQGGVMEIRRESYSVFFDINDLSCTVCNKSFEIFNDLIDHLVSEHDAKYNKTVKNTFIPFKVGEDNVVCCSCDTEFTGLSIFAHINAVHFNESVLCGFCGLLLNDEAHLKSHMLMYHNGAHVCSECYKEFGSDYQLKLHEYRIHDENEPSRAFSANYARRQNLQILFNNTSMIPFKWRGKYMCFYCGEDFNDYSSLRKHTKGHGTCSNDDRAIKLIKAFDSEVKIDVSDITCEICGEPFTNFDEMVTHLMLDHNLPYNKDVDLMIATYRLVDLKCLICDETFDYFRKLVIHVNISHPEKCFQCHYCDQIFNKKRDLDSHVRLHHKKEYTCLKCTQSFPTNKALQFHRSHAHVSTCNICFQTFSSHNKRLKHLKKDHIIEGTKCGFCLKTLATRQAFFRHASKCNAKGEFTSPNERVIVDDGDDDKKKSIKVIRSNIACVLNMSTAVPFKYFLNKFRCFYCPKDFSDCDDLKEHTVTEHPHCDIRLKSMRLRHRYEGEYPGPFQGCTSEKRRKNLQILFNHTTIMPFKWRGKYLCFFCGKSYAEYTEFKKHTKAHGPCTTKDHSLKYIKGNHIEIKIDVSDIACEICNDLFVSFDEIIDHLIDKHNLDYNKNIDIPYQEYRLVDFRCMHCGEQFSYFAYLVNHVNNMHPKNSFICDDCGITFNKKRDLSVHIRNLHRHGGYPCEQCPQICDSYFTLRQHQNNAHFCKCNNCSLRFATQKLLRKHIQLDHPESTDLKCSYCSSEFHTSQGLKQHIRKCKVRLIAQVDATNISFPVENILGVEPKKKQNVLQIRQNIICVLNMSTAIPFKFFSKFSCFYCSQKFVEYEVLKEHTILEHPVCDLKSKCMRKCRGERITVKIDVACLACKVCCLPMHDLDSFIDHIISEHKANYDKSIICLEPHRIIKDNMPCPLCPDVTFRYFTTLLRHMNLEHNNNNRICDYCGKSFRTVTNLKVHISYTHTKSSECADCGVKFKNQWCLSRHRARCHNVKDFKCPKCPEQFESQYHKQKHLIHAHDIGHKCSYCNKMFTRNSFMKDHIRRTHLKEKNVPCSVCNERFFDNHLLRMHMVKHKGERKFICDVCGKAFLRRSNLSSHKEMHKKYGHVPLQV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -