Tocu001964.1
Basic Information
- Insect
- Tethea ocularis
- Gene Symbol
- -
- Assembly
- GCA_963555595.1
- Location
- OY741957.1:12076217-12076645[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-10 1.6e-07 31.4 0.0 1 43 15 57 15 59 0.89
Sequence Information
- Coding Sequence
- ATGGTGAGTAACTATAAACGCAAAACAGAAAGAGGGTCATACACCAAAGAGAAGCTCAAAGAAGCGGCACAAGCTGTCAAAAATGGAACTCTTAGTGGATATAAAGCTTCACAGCTTTATAACATTCCTAGAATGACAATCATGGATTGTGTGAACAAAAAAAGAACAAAGTCAAATACACTAGGAAGAAACACGGTCTTAGATCCCGAAGCCGAAGCGAAGTTAGCTAATGGTCTTAAATTGATGGAAAAATATGGCTTTGGCCTGAGCAGGAAGGAGTTGCTACTAACTGTTGGCGAATATGTAGAGAAAAACAATATCTCTACGTCCTTCAAAAACGGAATCCCTGGTCAGGCATGGTTTTCGGGCTATAAAAAACGCCACAATTTGTCAATCAAAAAACCACAGGCCGTCGAGTACGCAAGATAA
- Protein Sequence
- MVSNYKRKTERGSYTKEKLKEAAQAVKNGTLSGYKASQLYNIPRMTIMDCVNKKRTKSNTLGRNTVLDPEAEAKLANGLKLMEKYGFGLSRKELLLTVGEYVEKNNISTSFKNGIPGQAWFSGYKKRHNLSIKKPQAVEYAR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01415758; iTF_01415759; iTF_00686267; iTF_00923550; iTF_00161485;
- 90% Identity
- iTF_01415758; iTF_01415759;
- 80% Identity
- iTF_01415758; iTF_01415759;