Tocu012092.1
Basic Information
- Insect
- Tethea ocularis
- Gene Symbol
- -
- Assembly
- GCA_963555595.1
- Location
- OY741969.1:9359707-9373352[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-07 7.1e-05 22.9 0.1 12 38 6 32 2 36 0.84 2 2 5.8e-07 0.00034 20.7 0.0 4 38 121 155 118 158 0.86
Sequence Information
- Coding Sequence
- ATGGCAATGACGAAAGTGCTCGCAGAAAACATGAAAATCCGCAAGGCAGCTCGAATATACAGAATTCCCGAATCGACTTTGCGAAAATAtgtcaaatcaataaaacaCGGCGAAGAGATTTTGGTAGAACCTAAATTAGGGAGGTTCAGTAGAACTTTCCCAGAGATTTATGAAGAACAAATGATTAACCACGTCAAAAAGCTGTGTAAAGAAGGCGATCCGATGACCAAAAGCGATTTTTTGAAGCTAGCATATGAATTTGCAGAGCAACATGGCCTCCCGCATCGATTTAATACTAAAAACAAAACAGCTGAAAGAGGTAAGAAAACTCGGAGTAAAAGGCGTTTATGGAAAAATAGGGACTTAAAAATAGCAATAGATGAAATTATTTCTAGTGGAATGAAAACTAGTGTAGCCTccaaaaaatatcatgttccaAAAACAACTTTACATAAGAGAGTTCAAGCGATAAAGCTGGGCAAGGAAATTACTTTAAAACCAAAATTGGGAGGCAGCACAACATTTCCAATGAAATACGAGGAACAATTGATTAAACGTGTTGAACAACTTCAGAAAGAGGGCATTCAGTTAACTAAAACTGAATTCTTAGAGATCACTTATCAATATGCGGAGCAACTTGGTATTCCGCATCGGTTCAATGTTGCTAAGCGGAGAGCCGGTGATGACTTCTATTGCGCTTTTAAGAAACGGCACCCTGATTTCAAGTTGAAGTATACATTTTCGCAACGAGGTCCGTCCTACTGTAACCAGTATTGCTCTAAAAAGGCGACGCTGCAGTGTCCGGCTAAACTGACCTTGAATAAGGAAGAAACATATGAAATTATAAACGTGAACAAAAAGGATGTAATATTGTACAAAAATCATACATTCCTGCAACGCGGTGCGTCCTACTATCACCAGTATTGCTCTAAGAAGGCGTCTCTACGGTGTCCGGCTAAGATAACCCTTAATAAGGATGAATCATATGAAGTTATCAACGTGaacagtaaaaatataattctgtataaaaattatacattttcgCAACAAGGTCCGTCCTACTGTAACCAGTATTGCTCTAAGAAGACGATGCTGCAGTGTCCGGCTAAACTGAGCCTTAATAAGGATGGTAGTATACAAAATGCAATCACGAAGCATAATCATCCGCCACCAAAACTGTTTAAAACGAACGATGGAAAGTATTTTAGGTTATCTAGATAA
- Protein Sequence
- MAMTKVLAENMKIRKAARIYRIPESTLRKYVKSIKHGEEILVEPKLGRFSRTFPEIYEEQMINHVKKLCKEGDPMTKSDFLKLAYEFAEQHGLPHRFNTKNKTAERGKKTRSKRRLWKNRDLKIAIDEIISSGMKTSVASKKYHVPKTTLHKRVQAIKLGKEITLKPKLGGSTTFPMKYEEQLIKRVEQLQKEGIQLTKTEFLEITYQYAEQLGIPHRFNVAKRRAGDDFYCAFKKRHPDFKLKYTFSQRGPSYCNQYCSKKATLQCPAKLTLNKEETYEIINVNKKDVILYKNHTFLQRGASYYHQYCSKKASLRCPAKITLNKDESYEVINVNSKNIILYKNYTFSQQGPSYCNQYCSKKTMLQCPAKLSLNKDGSIQNAITKHNHPPPKLFKTNDGKYFRLSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -