Tfer040591.1
Basic Information
- Insect
- Tetanocera ferruginea
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_958299015.1
- Location
- OY282644.1:62865270-62869272[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 4.8e+04 -4.7 2.6 15 19 170 174 170 174 0.87 2 14 0.045 1.1e+03 1.2 0.4 4 10 205 211 204 211 0.96 3 14 9.2e-08 0.0022 19.3 17.3 1 19 219 236 219 236 0.99 4 14 0.33 8.1e+03 -1.6 0.8 5 10 261 266 261 266 0.95 5 14 5.9e-06 0.14 13.6 18.3 1 19 272 291 272 291 0.96 6 14 0.59 1.4e+04 -2.4 0.8 6 10 316 320 315 320 0.91 7 14 1.3e-07 0.0031 18.9 12.2 1 19 326 344 326 344 0.99 8 14 1 2.4e+04 -3.1 0.4 5 8 372 375 369 376 0.58 9 14 6.5e-09 0.00016 23.0 11.7 1 18 379 396 379 397 0.97 10 14 1.2e-06 0.03 15.7 15.9 1 18 431 448 431 449 0.98 11 14 4.3e-08 0.001 20.4 13.7 1 18 458 475 452 476 0.85 12 14 0.41 1e+04 -1.9 1.7 5 10 503 508 503 508 0.94 13 14 0.22 5.3e+03 -1.0 11.5 9 18 521 530 514 531 0.86 14 14 0.01 2.5e+02 3.2 5.4 3 11 544 552 534 553 0.86
Sequence Information
- Coding Sequence
- atgaatgttaataaaaaatcatcagAGTCTAAAAGGCAGTGTGCAAAAACTAATTCAGGTTCTCAATTAAGTAACGCAACAACTATGTTTAAGGCAATTCAAAACAACGATATTCAAAATGCAAAAGGACTAATAAAGGATTTTGAATCGAGTTCTGAAGAAGAAGATCTTAATGAAGAAGAGATTTTAGacaAACTCTATAAGAACTATAATGCTAGTTCCAACAATCAACAACTTTTGACCAAGACTGTTGGTTTTCTTGAGAACGTTCTTCACTCGGGAGCTGCCACTTGTCTTATATGCATTGGTAGCGTTAAACGAGCAGATGCAATTTGGTCGTGCAGACACTGTTACTGCATTTTCCATTTAACCTGCATTAAACGGTGGTCAAACGATAGCCTCGCACAAACCAAGACACATTCCAACAGTCAGCAGCACAATGAAGGTTACTATAACAATTTGGGCGTTTATGTACCTCCTAAGAAACCGAAAACACCCAAGTGGTACTGTCCACAATGCAGGCAGGACTATAACCTTAACGATCGACCAACTCATTACGAATGCTTCTGCGGAAAAGAGCTCAATCCAGCTCAACAATCTTGGCAAGTACCTCATTCCTGCGGTGAAGTTTGTGAGAAAAAACTGCAACCTGAATGTGGACATCAGTGCTTGTTGCTTTGCCATCCAGGACCATGTCCACCTTGTCCACAGAATGTATTTGTTTCGTGCAAATGTAGCAAGTCCGCTCCGAAATGGGTGCGCTGTTTCCAGAAGACGTGGACGTGTGACAAGCTGtGCACTGATATGCTGCCTTGTGGAAAACATCACTGTGAGAAAGAATGTCATGAAAATGGAAAATGTCCACCATGTTCACGAACCAGCAGACAGCAGTGTGTATGTAAAAATGAAGAAGCAACTCGGAATTGCTCCGAACTAACGTGGCAttgtaaaaaaGTTTGCAATCGTCAATATCCATGTGGAATTCATAACTGTAAAAGAATTTGTCATTCAGATCCATGCGGTGACTGTCCACAGGGACTACCACGATATTGTCCTTGTGGAAAAACGaaaaaaataggaCCATGTAATGAAACCATTGAGTCTTGTGGAGATACATGCCAAAAAATACTCTCATGTGGAATTCACAAATGCTCACAAAGATGTCATAATGGGGAATGTAGTACGTGTCTGATAATAACAACGAAAAAATGCCGCTGTGGTAAATACGAAAAAGAATTGCCCTGCTGGAAGAGTTTTTCCTGCGAAACAAAGTGTAAACAAATTCGTGACTGTGGAAAACATGCGTGCAATAAAAAATGTTGCGATGGACAGTGCACACCTTGCGATAAGATTTGTGGTAAAACATTGTCATGCAGGAAGCATAAGTGCAAATCGATCTGCCACGAGGGACCTTGTTATCCATGTAACCAAAATTCAAAGGTGAATTGTCGTTGCGGCAGTACTACTAAAACTGTACCGTGTGGTCGTGAACGTGTAGCACGTATCACATGCACAGAACCTTGCAGagtTCCATCGAAATGCCATCATAAAACTCGGCATCGCTGTCACAAAAACGAATGTCCCCCATGTGTTGAAAAATGCGGCCTGGCGAATACAACCACTGGTTGCTTGCACAAGTGCGAAACCCGATGTCATGCAGCGATTAAAGTACCGAAAAAGTTATCTACCACAATAAAAAGTGTTTGGGACTATAACTCTACAGAAGTATGTATTAGTCTAAGCACCAGCGATCCCTAG
- Protein Sequence
- MNVNKKSSESKRQCAKTNSGSQLSNATTMFKAIQNNDIQNAKGLIKDFESSSEEEDLNEEEILDKLYKNYNASSNNQQLLTKTVGFLENVLHSGAATCLICIGSVKRADAIWSCRHCYCIFHLTCIKRWSNDSLAQTKTHSNSQQHNEGYYNNLGVYVPPKKPKTPKWYCPQCRQDYNLNDRPTHYECFCGKELNPAQQSWQVPHSCGEVCEKKLQPECGHQCLLLCHPGPCPPCPQNVFVSCKCSKSAPKWVRCFQKTWTCDKLCTDMLPCGKHHCEKECHENGKCPPCSRTSRQQCVCKNEEATRNCSELTWHCKKVCNRQYPCGIHNCKRICHSDPCGDCPQGLPRYCPCGKTKKIGPCNETIESCGDTCQKILSCGIHKCSQRCHNGECSTCLIITTKKCRCGKYEKELPCWKSFSCETKCKQIRDCGKHACNKKCCDGQCTPCDKICGKTLSCRKHKCKSICHEGPCYPCNQNSKVNCRCGSTTKTVPCGRERVARITCTEPCRVPSKCHHKTRHRCHKNECPPCVEKCGLANTTTGCLHKCETRCHAAIKVPKKLSTTIKSVWDYNSTEVCISLSTSDP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -