Tfer011528.1
Basic Information
- Insect
- Tetanocera ferruginea
- Gene Symbol
- lola
- Assembly
- GCA_958299015.1
- Location
- OY282640.1:170650498-170652802[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-11 9.7e-08 33.0 0.0 3 45 438 480 436 480 0.90
Sequence Information
- Coding Sequence
- ATGGAGCAGCCCAATATGTCACCAACCGACGCACTGGCCGCATCGACTTCTAATATGATTGGTGCTGGCAGTGGTGTAGGTGGTGGTGTtggcggtggtggtggtggtcaAGCTCAGCCACCGGCGCCGCTGCCATTACCCACAAATAGTGAAGGACAAACTTATTGTTTGCGTTGGAACAATCACAAATCAAATCTGATTGAAATACTCGACGCTCTGATCAAGGTCGAAAGCTATGTGGACTGCACCATTATCGTGGACGATCAGGTGCAGTTTAAGGCGCATCGCGTGGTGCTTGCAGCCAATTCACCGTATTTTCAGTCAATACTGCAGGATGTGCCCATGGATCACTGCAGCATCATATTTCCCGGCGTCAAGGCGTTCGAGATGCGCGCCTTGCTCGAGTACATGTACACAGGAGAGGTCAATGTCACACAGAGTCAAATACCACAGATCATGCGCATTGCTGAGGAGCTCGAGGTCAAGGGTCTCTTCGACATGGCTGATCTGAAGGAGAAATTCAACAAACTGAATGATGAACAGGCTGAAAGTGTTGGAAATCCCTACGCCTGCTCAGCGGCACCCACCGTTCCCTACACATCGGCTGCTACCTCGTCTACAACGCCACACAATGGTTCGCAAGACCATGTTGATGCCGCTGCTCTGCACTCTTCATCCGTGATCTCAACATCAAGCAATATTTCACCATCTGCAGCACCTTCAAGTAGCTCCTCGCCGCCATACAACAGCTACAAGTCGCCATATACGAACATGTTTTCAAAGTCGCCAGCACCTTCGGCTCTAGCTGCTCAGACGCAGGCATCCGTTTTAGCACAGACACCAACCCACCAGCAGTCACAGTCAAGTGCCGGTGCTGAACGAGCACAATGGCCGATCTCAGCTGGCATGCCAGCAGCTGCAGCTGCTATGCTAAGCGCCGTCTACGAGTCTGCACCTGACATGAATCCGCTAAAACGCAAGAAACTTTCATCGATCTCGAGCATGTTGATGAACCGCGATACGCCCATACTACGCAATGTGCTAGCTCAATCCAATCCGGCAGACTCGTCACAACCGATGCCGCTGCTATTGCCAGGTGGCGGTAACAAAGTCGACAAGGCCTCGAcgcacaacaacaaccacagttTCAATGGCTCGGACTATAGCAGTGAAAAGAAATATCCAGAGGAGCCGCACTCGCCGTACACCGATCGTTCTTTCGAGGATGATGGCTTCGATCCTAAGGGTAACTTTGGCGCAAATCCCAATAACCAGAAGCCTGAATGGAAGCGTTACAAGCAGTACACGCGCAACGACATCATGTCGGCAATTCAGTGCGTACGTGACGGCATGAGCGCTCTACAGGCTTCACGTAAGTTTGGCGTGCCTTCGCGCACACTCTACGACAAGGTCAAAAAGCTGGGTATCACAACTGGTCGTCCGATGAATCGCACCATGAAACGAAGTCCCAGCAATGTTGAGACATCTGCCGCATTCCCCTACGCACACGGCTACGGTCAGTCCGAGCCTTTGCTCTCATCCTTACACGACAGCCGTGATGAGCGTGACATGTCCAAGGAGCACCCACGCGTCGATCACCACATGTCACATGGACCCACCATTCCACACCAAGCCGCTGCCTTGCTTGATCACGCCCTTTTGCAACAGGCACTTGAGAATCGCGGTGGCGATATTGCTGGTCGCGAAGCACTACACGCCATGGCCTTGGCTGCGGCTGCACATGCTGCTGTCAATCGCATGTCGGCCAGTCCTGGCCCCAACGGCACTGCACGCTCGCCCAGCCCAAACTTTGTCATGAAGTATGCGCGCAACGAACACGAACTGATGTTGGAGCGTGAGAAAGAACGGCGACACATGGAGCGAGAGCGTGAGCGTGAACTAGACTTGGAGCATGAGCGTGAACTTGAACGCGAGCGTGAACAGAACGATTGTGAACGTGATGCCGACGATGAAGACGATCATGTCGAAGACTTATCGGTGACACGAAAGGATTGTCACACACCGGACAACAGAAGAGCCGATTCGCCTTACTCGCCACCACCAGCGCCGCTGTTGCCAGCTGGTGAAAACAACAGCGTCATCATGCCACCGATGTGTGTCAAACTGACGGGCAACAGCAATGATGACTTTATGATGAATGACAACGGCGGCGTCAAGCGAGAAATAATCAGCGACGATGGTCGTGCTGACTGA
- Protein Sequence
- MEQPNMSPTDALAASTSNMIGAGSGVGGGVGGGGGGQAQPPAPLPLPTNSEGQTYCLRWNNHKSNLIEILDALIKVESYVDCTIIVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPQIMRIAEELEVKGLFDMADLKEKFNKLNDEQAESVGNPYACSAAPTVPYTSAATSSTTPHNGSQDHVDAAALHSSSVISTSSNISPSAAPSSSSSPPYNSYKSPYTNMFSKSPAPSALAAQTQASVLAQTPTHQQSQSSAGAERAQWPISAGMPAAAAAMLSAVYESAPDMNPLKRKKLSSISSMLMNRDTPILRNVLAQSNPADSSQPMPLLLPGGGNKVDKASTHNNNHSFNGSDYSSEKKYPEEPHSPYTDRSFEDDGFDPKGNFGANPNNQKPEWKRYKQYTRNDIMSAIQCVRDGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSNVETSAAFPYAHGYGQSEPLLSSLHDSRDERDMSKEHPRVDHHMSHGPTIPHQAAALLDHALLQQALENRGGDIAGREALHAMALAAAAHAAVNRMSASPGPNGTARSPSPNFVMKYARNEHELMLEREKERRHMERERERELDLEHERELEREREQNDCERDADDEDDHVEDLSVTRKDCHTPDNRRADSPYSPPPAPLLPAGENNSVIMPPMCVKLTGNSNDDFMMNDNGGVKREIISDDGRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01181270;
- 90% Identity
- iTF_01415138; iTF_01181079; iTF_01181270;
- 80% Identity
- iTF_01415138;