Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: -
Assembly: GCA_963978835.1
Location: OZ022227.1:19189895-19192891[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.74 92 4.6 2.5 1 23 378 400 378 400 0.97

2 8 0.029 3.6 9.0 4.5 2 23 413 435 413 435 0.94

3 8 2.3e-05 0.0029 18.7 0.2 2 23 475 496 474 496 0.97

4 8 0.00016 0.019 16.1 1.4 3 23 504 524 502 524 0.95

5 8 3.8e-06 0.00047 21.2 1.1 1 23 532 554 532 554 0.99

6 8 4.3e-06 0.00053 21.1 1.2 1 23 586 608 586 608 0.99

7 8 0.0029 0.36 12.2 1.6 2 23 618 640 617 640 0.94

8 8 1.7 2.1e+02 3.4 0.3 1 13 651 663 651 670 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.74	92	4.6	2.5	1	23	378	400	378	400	0.97
2	8	0.029	3.6	9.0	4.5	2	23	413	435	413	435	0.94
3	8	2.3e-05	0.0029	18.7	0.2	2	23	475	496	474	496	0.97
4	8	0.00016	0.019	16.1	1.4	3	23	504	524	502	524	0.95
5	8	3.8e-06	0.00047	21.2	1.1	1	23	532	554	532	554	0.99
6	8	4.3e-06	0.00053	21.1	1.2	1	23	586	608	586	608	0.99
7	8	0.0029	0.36	12.2	1.6	2	23	618	640	617	640	0.94
8	8	1.7	2.1e+02	3.4	0.3	1	13	651	663	651	670	0.86

Sequence Information

Coding Sequence: ATGgttaaattatcaaatttctcTAAAACTTGTAGACTTTGTTCGAAAGTTTACAGAGTTGAGAAACTGGTAAAAATCTTTAGTAAGAGGGGAATATCTTTGAACCTTAAAGACAGCGTGAATGCTCACCTACCAATAAAGGTGATAGAAAACGATGCGACAATGCCAAAAAATATTTGCATCAATTGCATCAGAAGATTGAATGCTACTAATGAATTTTTTGGGACAGTTATAGcgtctgataaatttttcaaaaaattattgaaaaaggTTgaagaaaaacaatctgACTTTATTAAAATGACAAAGATAAGTGACAAATCTAACGGTTTATCGTCGCCAGGGATTAACGCATCAAAAGAATGTCTCAACATGCGGGAATCTCATGTAGATGCAAATCAGGTCGAGTCCTATGGCATAAACATAACAAAATCTGAACTTATTTTGTCTAGTAAAATGTGCAATAATGCATCCGAAACAAAGGAGACAACTTTATCCAATATTAGGCTCAATCAAGGTCTGGGAAACTTGTGTAATCCTAAGAACGATGATATTTCGAAGGAACTAAGTTGCCATCTGATAGATGTTACACCaaaaagtaaaattgaaaCGAGTGTAAGTTCATCCAATGATTCTAAATACGTTAACATCGTACCTAAGGCCAGCCATGTCGTATTAGGAAACAGAAATTGTAATGGAAAGATCATAATCAATGTTGGAAGCAGCGCAATGGGTGGCAAAGACCACCACACGAAGTTACCAATAGAAGTATTATGCTGCCCTGACTGCAATGAGACTGTGAAAATCTATTCGATGGAAGAGAGACAAttgttttttgaatatttgaaacaacATTGTTGTAGGAAGGTCACAGATTCCGATAAAACGATCAGATCGTTTGTTAAATACAAGGAAGCTTATGGAAGCGAAGATGTTTTTCTTGAGGCAAAGAAGGAGCCTTCTGAAATTAACGAAGGTACCAAATCACAAACCGCCAATCGGAAATGGCCGGACGGTGATTTGCCGGGTGATCCTGGCCCCGATCTTACCCtctatgaaaatatatttgaagatGATGTGAGATTAGATGATGATTTCCATTGGCCAATGCCGAAGCGAATTAGACGTCTGCACAAATGCGCTTCTTGTGAATTTGTAACGAAAAGTGCATTGAGACTTAAAACTCACCAAAAACTACACAGAACATTGGATAAAAGGCAGATATTACACTCTAATAGCTGCAAGCACTGCCATAAACGTTTTGATACTGTAAATGAAGCCAAAAAGCACGAGAGATTAGCACACGTTACTTTTGGTGCTAAAAATTCCCTGTGCGAATACTGCGGAATAATGAAGCCACAAAAAACTTTGAGGGATCATGTTTTGAAACAGCATACTGTACAGAGCGAAATAGAAATGCAGGAATGCGACGTCTGTGGAAAATCCTTTATTTCACCAACTAGTTTGTACCTGCACAAAAAGATACACACTATAGAAAAACAACACCTGTGTGATTTGTGCGGTAAAGCTTTTAAGCAGAGGATCGCAATGCGTCGACACTATATGCTACACTTTCCCCGAGCTCCGCCAAAATTTAAATGCAACATATGCGAGAAGAGAGTTACAACTAGAGGCTCCCTTCGTCTGCACATGATGAGACATACAGGAGAAAAGCCCCAAGAATGTCCAGAATGTCATATGGTAATGAGGCATGGGCTCAAACACCATATGAGATTACATTCTGACGAGGCACCATTCAAATGTGTAGTATGCGGTGCAGATTTTAAACGTCGAGATTATGTGCGAAGGCATATGAGAAAACATTTAAATGAAACAGAACATCGATCGCTGCAGTGTAATATTTGCGACCACGTGTTTGACGATATTAAAAACTTTTTAATTCATCATCAAAATATACACTGTAACGAAATTTTTACCCAGATTAAGATATACGAATGTAAAAATTGTTCCATGCAGTTTGCAGACCCGTTACAACACAAAGATCACGAAGAAGTTTGCAGAAGTATCGAGAGGGAAGCACCTCGTAAAGAAGCTTACATTAACGAAGTACAGTCTTGTATTATGATTAGTCACAATAGAGTTGGCGGAATAGACGATCATAAAGATTGCCCAAAGCGCATTGCCTCGGACCGATCTTATCCCTGTGTTTACTGTGATTATAAGGGCATGGGTAAAATCACAGTTTTAGAACACGGGCAGAAAGATACAACGGGGCAATTACTTGAGAGCACTCTTGGCGGACAGAGATTTCAAAATCTAAGTAATTCCATGAACAATAGACACCAGCAAAGCCGTTTCAAGTGTAACAAAGAGTTACGCAGATTGAAAAGACAGCACGAAAATGAACACTCCAATGATGTTATTTTGTCTGAGGATGTTATGTCTTTGGATACTGAATCCTCTGAATATGCATACattaatataattgataaacAGAACATGCGTGATAAAGATATGCTGATGTCTGTCGATGAACAAATAATGACCAGTAGTAGTGTTCACGTATTCGAAAGCCCGGTAGAACAATTTAGTCAATCTTTGCATTCGCATTCTCAATCAGAACTTGGAATAAATCCACACACCGAGACCTACACAAGAGAATCTCTTTCTTGGAAGCAACTCTAG
Protein Sequence: MVKLSNFSKTCRLCSKVYRVEKLVKIFSKRGISLNLKDSVNAHLPIKVIENDATMPKNICINCIRRLNATNEFFGTVIASDKFFKKLLKKVEEKQSDFIKMTKISDKSNGLSSPGINASKECLNMRESHVDANQVESYGINITKSELILSSKMCNNASETKETTLSNIRLNQGLGNLCNPKNDDISKELSCHLIDVTPKSKIETSVSSSNDSKYVNIVPKASHVVLGNRNCNGKIIINVGSSAMGGKDHHTKLPIEVLCCPDCNETVKIYSMEERQLFFEYLKQHCCRKVTDSDKTIRSFVKYKEAYGSEDVFLEAKKEPSEINEGTKSQTANRKWPDGDLPGDPGPDLTLYENIFEDDVRLDDDFHWPMPKRIRRLHKCASCEFVTKSALRLKTHQKLHRTLDKRQILHSNSCKHCHKRFDTVNEAKKHERLAHVTFGAKNSLCEYCGIMKPQKTLRDHVLKQHTVQSEIEMQECDVCGKSFISPTSLYLHKKIHTIEKQHLCDLCGKAFKQRIAMRRHYMLHFPRAPPKFKCNICEKRVTTRGSLRLHMMRHTGEKPQECPECHMVMRHGLKHHMRLHSDEAPFKCVVCGADFKRRDYVRRHMRKHLNETEHRSLQCNICDHVFDDIKNFLIHHQNIHCNEIFTQIKIYECKNCSMQFADPLQHKDHEEVCRSIEREAPRKEAYINEVQSCIMISHNRVGGIDDHKDCPKRIASDRSYPCVYCDYKGMGKITVLEHGQKDTTGQLLESTLGGQRFQNLSNSMNNRHQQSRFKCNKELRRLKRQHENEHSNDVILSEDVMSLDTESSEYAYINIIDKQNMRDKDMLMSVDEQIMTSSSVHVFESPVEQFSQSLHSHSQSELGINPHTETYTRESLSWKQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01303794;
90% Identity: -
80% Identity: -