Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: -
Assembly: GCA_963978835.1
Location: OZ022236.1:623658-627224[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.008 0.99 10.8 2.6 1 23 110 133 110 133 0.97

2 13 0.011 1.4 10.3 4.6 2 23 265 287 265 287 0.91

3 13 0.0035 0.43 11.9 1.4 2 23 354 376 353 376 0.95

4 13 6.4 8e+02 1.6 7.6 3 23 463 484 462 484 0.95

5 13 3.7 4.6e+02 2.4 0.7 1 23 534 557 534 557 0.91

6 13 4.2e-05 0.0053 17.9 0.0 3 23 606 627 605 627 0.96

7 13 0.0017 0.21 12.9 0.2 2 23 654 676 653 676 0.90

8 13 0.0084 1 10.7 3.6 2 23 719 741 718 741 0.96

9 13 0.11 14 7.1 4.2 3 23 756 777 754 777 0.92

10 13 3.4e-05 0.0042 18.2 0.4 2 23 827 849 827 849 0.96

11 13 0.062 7.7 8.0 0.8 1 23 929 951 929 951 0.98

12 13 0.00012 0.014 16.5 0.3 2 23 967 989 966 989 0.96

13 13 0.0056 0.7 11.2 0.4 1 23 1066 1089 1066 1089 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.008	0.99	10.8	2.6	1	23	110	133	110	133	0.97
2	13	0.011	1.4	10.3	4.6	2	23	265	287	265	287	0.91
3	13	0.0035	0.43	11.9	1.4	2	23	354	376	353	376	0.95
4	13	6.4	8e+02	1.6	7.6	3	23	463	484	462	484	0.95
5	13	3.7	4.6e+02	2.4	0.7	1	23	534	557	534	557	0.91
6	13	4.2e-05	0.0053	17.9	0.0	3	23	606	627	605	627	0.96
7	13	0.0017	0.21	12.9	0.2	2	23	654	676	653	676	0.90
8	13	0.0084	1	10.7	3.6	2	23	719	741	718	741	0.96
9	13	0.11	14	7.1	4.2	3	23	756	777	754	777	0.92
10	13	3.4e-05	0.0042	18.2	0.4	2	23	827	849	827	849	0.96
11	13	0.062	7.7	8.0	0.8	1	23	929	951	929	951	0.98
12	13	0.00012	0.014	16.5	0.3	2	23	967	989	966	989	0.96
13	13	0.0056	0.7	11.2	0.4	1	23	1066	1089	1066	1089	0.98

Sequence Information

Coding Sequence: ATGGCGTCGACGATAGCTCGAGGTCCGATACTTCCGGAATCCGGTGACGGGGATAGCGATGTATCAAGCGGCGAGGACAGAGAGACGCTGAAGCGTCCCCACGGCGAGGCGGACCCAGCCGGTGGAAAGAAGCGTAGGAAACAATCGACCCCGGTTAGATTTCCGGCATCGCTTATGGCCGATGatcgagaagaagaagaagaagaggacgaAGAGGAGGGCGAAGAGTCCGAGGAAGACGTAACGGCGGTAGAAGACAGCGAAGGTAAGCCCTGCACCGTCGAACGGATCCACCAGACGTCAAAggacgaaaatttgaataacgaATTCCGCTGCCAATATTGTAGTCAATTGTTTGATAGCAAACAAGTACTTAATCACCACATTAACAGCGAACATAATCTGTCCGGTATATCGAGGCAGAGTCTACAGCGGTCGCCGGTTCACTCCCATATTAGCATTAAACAGGAGTTGAATACACACCAGGATGCAGCCGAAAGTCCTGTCAATCTATCCGGCATAGGTATAAAGAGTTTCGCCGCGACATGGCTGTCGGGACATGTCCAATCCCAGTCGCAAACGATCCAATTGCAATCCCAGACCGACGAGTGGCCTCCTTCCGGTTCGGCCGGTTCCTTGTCCTCGATCTCCAACCATCTTCAAGCCTTGCCTTTCCCCGGTGCGTTGGCGCAGTATCTTCCATTGCCGAACTTCTCGCTGGGAGATTCGAGCCAGGTCGGCAACAGGCCGCCGATAGGTCCGGCACCAGTGAGGATATTCAACCCAGACGCGTACTGCGACTTGTGTAATAAAGAATTTTGCAATAAGTATTTCCTCAAGACCCACAAGGCGAACAAACACGGTATATACGTTGATACTCCCGGGCAAACAGTAGGGGAATCGGGTTTCACCGGGCCACCATATCCAGGAGCTTTTTTGACCGGTGGTATGAAGCTGGAGCAGCAACAGACGCCGCAGCAACAACCGTTGAAATTGGAACCACTGAACGTCGGTGTTCCGACTGGACCCTTACTGCAAGCACCGCTGCCTTTGAACTCCGTGTGTGACCTGTGTCAAAAACGATTCAAGAACGACGAGTCCGTGAGGAAACACAAGCAGAAAGTCCACAACGGGGACCCCAACGATCCGGATACTCAAATGCTGCCGCCTCACGCCAACGACGACGACAAAGAGACTTCTCATCACAGCCTCAGCCCTGGCGCGATGGAAGCCCTGTTCAAACAGGAGTTCGGAGTCGAACAGGAGGACACGTCGTTCATGCCCGCGCCGAGGCACCTATCTCCGCAGTCCGTACAGCAGGCGAGAGACTCGGGGTTCAACGTCGACCGGCTTAGGAGACTGGGAGTTATAAATCCCGAAGCATTCTGCGAGATCTGTTGCAAGGAGTACTGCAACAAGTACTTCCTCCGTACGCATAAGATGAAGAGACATGGAATAGTCGTTCACGACAATGAGAAGTCACCTAGTAATCCGGGCGCCGCTGCGGCATGGCATCACGTACAGACTAGCCCTTTGAATCTCATCGTGGGAGAGACCAGTGCCAACAGTTCAGAGTCCGGTGATCGTCCCGGTGAAGATTACGAGTGCAAACCCTGCGGGATTAGGTTTCAAACTGTGGGACTGCACCAGGCGCATAGACAAAAGATACACGAACCGGAGGAACAGGCCGCGTCGCCGAAGCCGGAGAACGAGGACGCGACCGACCAAAGGGCTGATTCCATCAGCGAGGACCTCCAGAAGTTACAAACGATGATTCTGCAGCTGAACGGCTTAGAGTCGGGACGAGGAGCGCCGTGTCCGATTTGCGGCAAGGATTACGACACTCGACAGGCCCTCAGAAGCCACATGGCCATGGAACACGGAGCTGTCGTCGACGACACCGTCTCGTCGCCTTTGCAAGGTACGGAAAAGTCGCCTACGCCAAGCAGCGGCTCCCTGAACTGCACGTTTTGCGAAAAGGAGTTCTCCGGGCAGGAAGCCCTGAGGAAACACGTCGCCGAGGATCACCAGCCGTCGACACCAACGCCGAGCGTTATTCCGGCCGCTGCCGTTACGACGCCCGTTACGCCGACTACGCCGACAGCTCAAGCCCAGGAACGAAGAGCGTCTATTTCGATGACGCCGACGTCCAGCTACTGTGAAATTTGCAACAAGGAATTGTGCAACAAGTACTTCATGAAGACACACATGCAGAGAATGCACGGTATCGAGATAGAGAACGGGGCACAGATCGGTGGTGTGATATGCAACATATGCAACAAGGAGTTGTGCAGCAAGTACTTTCTTCGCGTTCACAAACACAACACCCACGGCATTATCGAAGAAGGGACGACCACCACGACCACCAGTAGCTCAGCCAAACAGGCGGATAACGATGCAACAAGCAGCGAAGACCCGGCCCTGAAACCCGAGCAATTGAGCGATTTGACTCACCGCTACTACGCCTACTTCACGGAAGTCTGTCCGATTTGCAACAGGAGATTCAGGAGCACCAAGTGGCTGAAGGCACACCTTCTCAGCGATCACGGTAAGGCGGGAATCGACAAGTGGCGGGAATTGGAACAGCAATATCAGTCGGGACCGAGGAGCGGAAGGACGCCCGGACCCTCGCGAGGGTCTTCGGTCCCGCACCAGAATCCCAGTTTGAAAATACCGAACGGTATTGAACTGAGCCAGCACCTTAAAACCGGGGACTATTCCGGCCTCGGTAATCAAGTGCTCTCGACTCTCTTCGGGTCCAGCGAGGACCAGCAATTAAAAAGCTACAGGTGCTCGTATTGCACATTCACGACGCCCGTGCTCGCCTTCCTCTTCGTCCACGAGAGGTCACACACGAGTCCGCAGAGCGGTACGAGCATAGAGACCGATAGAAATTTACAATGTCCCGTTTGTCTCCAAGGATTTTCTCAGCCGGAATTGCTGCAGCATCATTTACTCACCCAGCATCAGTTCCCGGGTATAATATCGCCGTTTCAACCCCATTTACAGATAAATAGTTCGAGGGCTGAGTCCTCGTCGGAAAAGGATAGCGAGTCGAAGGACCGCACAGACCTCGATGACTCGAAGCAAACGAGCCCTCACGCCTCGGTTCAGAACGTTTCGTTTAATGATGGGCAAAAATTGCAGAGACCAACCGAGGACGCAACCGCTGTTCAAGTCACGCCCCAGGGTGCCTACAAGTGTGCACAGTGCGGTTATGCCACTCCGAATTTGAACCGTATTAAAAAACATATAAGAAAGGATCACAGGAGTGCGGGAAACGAGACGCAGGACAGCGGCGTTATAACTGCAGAATTGACACGCACCCTTAGGGAGGTTGCTAACAAACACAAGATTCCCGCGAGTTATGCCATGCCACAGGACCTCAATTCGAATCCTGACAAGACTATAATGCAACAGTTCCTTATCGAGGAGTGCACCGAGCCTGTACATGGTGGCTCGGATACGAATACGGAGAAGAAATTTGGACCCGCTTTTGTATATCTGCCAGTAAGGACGCGGATCAATGCTCCTTTGTCCGCATCCTTTAATCTAAGTCCTacctga
Protein Sequence: MASTIARGPILPESGDGDSDVSSGEDRETLKRPHGEADPAGGKKRRKQSTPVRFPASLMADDREEEEEEDEEEGEESEEDVTAVEDSEGKPCTVERIHQTSKDENLNNEFRCQYCSQLFDSKQVLNHHINSEHNLSGISRQSLQRSPVHSHISIKQELNTHQDAAESPVNLSGIGIKSFAATWLSGHVQSQSQTIQLQSQTDEWPPSGSAGSLSSISNHLQALPFPGALAQYLPLPNFSLGDSSQVGNRPPIGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDTPGQTVGESGFTGPPYPGAFLTGGMKLEQQQTPQQQPLKLEPLNVGVPTGPLLQAPLPLNSVCDLCQKRFKNDESVRKHKQKVHNGDPNDPDTQMLPPHANDDDKETSHHSLSPGAMEALFKQEFGVEQEDTSFMPAPRHLSPQSVQQARDSGFNVDRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIVVHDNEKSPSNPGAAAAWHHVQTSPLNLIVGETSANSSESGDRPGEDYECKPCGIRFQTVGLHQAHRQKIHEPEEQAASPKPENEDATDQRADSISEDLQKLQTMILQLNGLESGRGAPCPICGKDYDTRQALRSHMAMEHGAVVDDTVSSPLQGTEKSPTPSSGSLNCTFCEKEFSGQEALRKHVAEDHQPSTPTPSVIPAAAVTTPVTPTTPTAQAQERRASISMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIIEEGTTTTTTSSSAKQADNDATSSEDPALKPEQLSDLTHRYYAYFTEVCPICNRRFRSTKWLKAHLLSDHGKAGIDKWRELEQQYQSGPRSGRTPGPSRGSSVPHQNPSLKIPNGIELSQHLKTGDYSGLGNQVLSTLFGSSEDQQLKSYRCSYCTFTTPVLAFLFVHERSHTSPQSGTSIETDRNLQCPVCLQGFSQPELLQHHLLTQHQFPGIISPFQPHLQINSSRAESSSEKDSESKDRTDLDDSKQTSPHASVQNVSFNDGQKLQRPTEDATAVQVTPQGAYKCAQCGYATPNLNRIKKHIRKDHRSAGNETQDSGVITAELTRTLREVANKHKIPASYAMPQDLNSNPDKTIMQQFLIEECTEPVHGGSDTNTEKKFGPAFVYLPVRTRINAPLSASFNLSPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00060630;
90% Identity: iTF_01413692; iTF_01303728; iTF_00939898; iTF_01411843; iTF_01412636; iTF_00939039;
80% Identity: -