Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: -
Assembly: GCA_963978835.1
Location: OZ022235.1:4875037-4877298[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2 2.5e+02 3.2 0.7 1 12 254 265 254 268 0.84

2 10 0.014 1.7 10.0 0.4 2 23 276 297 275 297 0.97

3 10 0.0066 0.82 11.0 2.2 1 23 298 320 298 320 0.98

4 10 0.035 4.3 8.8 0.8 1 23 329 352 329 352 0.91

5 10 0.00079 0.099 13.9 0.8 1 23 373 395 373 395 0.97

6 10 6e-05 0.0075 17.4 2.2 1 23 401 423 401 423 0.96

7 10 1.5e-05 0.0019 19.3 0.6 1 23 429 451 429 451 0.99

8 10 2.9e-05 0.0036 18.4 2.5 1 23 459 481 459 481 0.98

9 10 3.9e-05 0.0048 18.1 5.2 1 23 486 508 486 508 0.98

10 10 0.0006 0.075 14.3 2.5 1 23 526 548 526 548 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2	2.5e+02	3.2	0.7	1	12	254	265	254	268	0.84
2	10	0.014	1.7	10.0	0.4	2	23	276	297	275	297	0.97
3	10	0.0066	0.82	11.0	2.2	1	23	298	320	298	320	0.98
4	10	0.035	4.3	8.8	0.8	1	23	329	352	329	352	0.91
5	10	0.00079	0.099	13.9	0.8	1	23	373	395	373	395	0.97
6	10	6e-05	0.0075	17.4	2.2	1	23	401	423	401	423	0.96
7	10	1.5e-05	0.0019	19.3	0.6	1	23	429	451	429	451	0.99
8	10	2.9e-05	0.0036	18.4	2.5	1	23	459	481	459	481	0.98
9	10	3.9e-05	0.0048	18.1	5.2	1	23	486	508	486	508	0.98
10	10	0.0006	0.075	14.3	2.5	1	23	526	548	526	548	0.98

Sequence Information

Coding Sequence: ATGTTAAAATGCGGCGCGCCAGGATGTACGACTAACGAAGACACGATGATAAACGGAAAGAGACTCACTCTATTCTCGTTTCCAACCTACGACGATTCGCTGGTTAAACAATGGAAAGAAAAGTCCAAGCTTACACAATCGTCGGATAAGGATAACACAGAGTTAAAATTGTGCCAATTGCACTTTGGATCTTCTAACTTTGTCTCGGATGAGAAAAACGCCTTAGCTCCTGGCGCGGTGCCAACGATATTTGaatttaataacaaaaggAGAATCGAGGAGGAGGAAAAGCCCGATGATTTACCCGAAGAACTACCcttgaaacaaagaaaatttcaagaagCCGGGGAAGAGCCAAATAATGTTATAACACTGGCAGAAATTCCTCAGATTCAATCTAAACcagaattattaataaatGATGAAGAGAAGAAGTGTGTAGAAACTATGCCTCTGAGTATAATGGAGCAGGTAGAAAACAGCCTGAATAAAAATGGTGGAGAATCATCTTCTGTATTTACAAAGCAGATAGACATGGGGAAGAAGGTCTACAGGCTGATAATAAGAATAGATAAAGTAATTGAGAAAAGGGAGACTTCTGTAAAGGAGGCAAAAGTCGTTGAGAAGCAACCAGAAGAATTAAAACCCCCTAAAACAGGATCTAGTATTGGTATCGGGTTGAAAAACGGTAGAGTTTTAAGACCGTGTTCAAAAACAGGGTGCAAACTCGTTAAAACTACCCTAAATTCTAAGCCTGTATTCCAATGCGAACGTTGTAACAAATACTACGTTGTCAAGGAGAGTAAAAGCGACGTGAATAACTGGACTTGTTACATTTGTCAGGAAGTATTGTCCAGTCCAGATGCCCTAAGTTGTCATATCCGTAAGCATTTCACGTGTGATATGTGCCAGGCACAATGTAGCACGCAGATATCATACGACAAACATATTAGGCTCCATGTTAGCACGGATCCATTGCTTCCTTACAAATGCCACAGGTGTCCGAATATATTTGAGGTGAAGGCTGACGTGCGTCAACACTACGCTGACAATCATTCTAAGATAACTAAACAGGATCGTATAAATAACAAGAAGCAATCACCGAACCAGGTGCTTTTTAGATGCAAATATTGTTACGCTGTATTTAAAAAGGAAGATGCGTACAAAATCCACGTTGAATCGCACATGGGAGACGGAAAATTCGACTGTGCTTTATGCAGCAAGAGATTTAAGACTGCTAAACATCTGGCCACTCATCAGGCCCGACATTTAGGAACTCTTAAATTCACTTGCAGAGTTTGTAGCAAGGAGTTTTCCAGCTTAGATGCTGTCGAAACGCACATGAAAACACACATGGAAGTTGTGAGGGAAGAACACAAGTGTAATATATGCAAAAAGATATTCAAAACCGAGTCTATTCTGAATAGTCATATGAGAGGACACCTGTCGCGTGCACATAGATGTCCATTGTGCCACAAGgcttttattaataaaactaCACTAAGGATACATTTCAAGACTCATAACAAAGCTTCTGATCCTCCGACGAACAGAGATTTGATTGTGACAAAACAACACACATGTACATTGTGCCCCAGTACGTTTGAGAGCCGTTCACGATTGTACAATCACATAATGACACACCTTGAGCAAATGCACGGTGCGGAAGGAGGCGAGGTAGTCTTTGACGGACTCAATGAACTCCTTGAAACCGACGAGGATATACTTTCGTAG
Protein Sequence: MLKCGAPGCTTNEDTMINGKRLTLFSFPTYDDSLVKQWKEKSKLTQSSDKDNTELKLCQLHFGSSNFVSDEKNALAPGAVPTIFEFNNKRRIEEEEKPDDLPEELPLKQRKFQEAGEEPNNVITLAEIPQIQSKPELLINDEEKKCVETMPLSIMEQVENSLNKNGGESSSVFTKQIDMGKKVYRLIIRIDKVIEKRETSVKEAKVVEKQPEELKPPKTGSSIGIGLKNGRVLRPCSKTGCKLVKTTLNSKPVFQCERCNKYYVVKESKSDVNNWTCYICQEVLSSPDALSCHIRKHFTCDMCQAQCSTQISYDKHIRLHVSTDPLLPYKCHRCPNIFEVKADVRQHYADNHSKITKQDRINNKKQSPNQVLFRCKYCYAVFKKEDAYKIHVESHMGDGKFDCALCSKRFKTAKHLATHQARHLGTLKFTCRVCSKEFSSLDAVETHMKTHMEVVREEHKCNICKKIFKTESILNSHMRGHLSRAHRCPLCHKAFINKTTLRIHFKTHNKASDPPTNRDLIVTKQHTCTLCPSTFESRSRLYNHIMTHLEQMHGAEGGEVVFDGLNELLETDEDILS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01411573;
90% Identity: iTF_01414246;
80% Identity: iTF_01414246;