Tscr015942.1
Basic Information
- Insect
- Tenthredo scrophulariae
- Gene Symbol
- bab1
- Assembly
- GCA_963978835.1
- Location
- OZ022232.1:555906-557737[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-15 1e-11 45.1 0.1 1 45 342 386 342 386 0.96
Sequence Information
- Coding Sequence
- atggGGACTGCATCTCAACAATACTGCCTGCGCTGGAACAATCACAGATCAAACTTGCTGACAGTATTCGACGAGCTGTTACAAAACGAGGCTTTCACCGATGTCACATTAGCAGTGGATGGCGGAGCATCCGTCAAATGTCACAAAATGGTGTTGGCAGCATGCTCCTCATACTTTCAAACCCTCTTCATAGACCTCCCCTGCAAACACCCAGTGGTAGTTCTAAAAGATGTTAAATACATCGAGATAAAAGCAATTTTGGAATACATGTACCGCGGTGAGGTAAATGTGGCCCAAGAACAGTTGGGAGGTTTACTAAAGGTGGCCGAAGCTCTGAAAGTAAAAGGTCTGGTAGAGGAAAACGGCTCCCAagggagaagagaagaaggagaaacaGCTCCGTCTCCTCCAGCGATAACAACAAGCACAACAAGTAGCGCGGCTCATAGCAGTGGCCAAATTTCACCACCTCATTCAACCGGGACTCCATACAGTCTATACGGTAAATCACCGGTGGAAAGAGGCCAGGGAAGGTTGTCTCTCCCGATGTGGGCGCTCTCCGGCCTGCCATTGGCCCAGCACCCTTCCTCTGGacatcctcctcctcctcacCACGCTCAACATTCTTCAATGTTAGGAGGGTCCTATGACAATGGGTCAGACTCCTCACCTCTGAAGCGTAAAAAACTATCAAACATGCTCATGAATCGTGATACACCGATCCTGCGAACCGTACTAGGACAAGGTCACGCGGACAGCTCTCAAGGTGGAGTGCCGTTGTTACAACCAGACAGCCACGAGAGCCACTCTCGTACTCATAGCAACGGTTCGGCAAATGATGTGGACAGACGCAACAGCAACGATCTTTCCCACAGTGAGGCTGTCCACAGCCCTTATACAGACGTATCGCTTATGGATGAGGATGAAAAACCTTCGCCACAGTCTTACGCGGGAGAGACAAACCGAGGAATAGTAAATTACGTTCCAACACAAAAGCCTGAATGGAAACGTTACAAACAATATACGAGGGACGACATAATGTCTGCAATAAACGCAGTTAGGGGTGGAATGAGTGCGCTACAAGCTGCTCGTAAATACGGTGTACCGTCTCGCACTCTTTACGACAAAGTGAAGAAATTGGGTATCACGACATCTCGACCTTTCAAACGTGGTTCGAACGGAAGCGGAGCTTGCTTTCCCTATGGTATAGGGGGGAATGCAAACGGAAGTATTTATAGTGGTGGATTGTCAGAGAGCGAGAATGAGAACAGTAGCGCCGGAATAGGGAATCCTGCCTCAATGCTGGATCCAAATTTCATAGAGAGTCGAGATCCAGCGGAAAGAGAAACTAAGATAGAAATGACAGGCTGCAGTCCAAGTTCCGCCGTTCATTCAATGTCCCAACAACAACCGACTACGGAGGACCAAGTTGAAGATCTATCGGTTACTCGTAAGCCTGAGATCCGAGTAATAGTGCCACCGTCAATAGTCAAGGAGGAAGAACAGGATACTCCGAATAACTCAAACGTAACTAACTACTAA
- Protein Sequence
- MGTASQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDGGASVKCHKMVLAACSSYFQTLFIDLPCKHPVVVLKDVKYIEIKAILEYMYRGEVNVAQEQLGGLLKVAEALKVKGLVEENGSQGRREEGETAPSPPAITTSTTSSAAHSSGQISPPHSTGTPYSLYGKSPVERGQGRLSLPMWALSGLPLAQHPSSGHPPPPHHAQHSSMLGGSYDNGSDSSPLKRKKLSNMLMNRDTPILRTVLGQGHADSSQGGVPLLQPDSHESHSRTHSNGSANDVDRRNSNDLSHSEAVHSPYTDVSLMDEDEKPSPQSYAGETNRGIVNYVPTQKPEWKRYKQYTRDDIMSAINAVRGGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSGACFPYGIGGNANGSIYSGGLSESENENSSAGIGNPASMLDPNFIESRDPAERETKIEMTGCSPSSAVHSMSQQQPTTEDQVEDLSVTRKPEIRVIVPPSIVKEEEQDTPNNSNVTNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01538079;
- 90% Identity
- iTF_00718733;
- 80% Identity
- iTF_01414331;