Basic Information

Gene Symbol
ARID5B_1
Assembly
GCA_963978835.1
Location
OZ022231.1:2474368-2482504[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-24 1.5e-20 74.1 0.0 2 89 239 324 238 324 0.95

Sequence Information

Coding Sequence
ATGATGTTGATATGCGATATTCGACCTCTGCAGGACGAGGTGTTGACGATATCAGAAAAGGTCGTCGTCCGCGTCAACGATTTGGTTACGTGGTTATCTCCGTCTTTAGAATGGTCGTGGGGACGCGAGGTGTCTTCTCCGCCCTCAACAAcgtgttcttcttcttccccgGACAATAGTCCGCGAAAAGATGACGCGCCTTTACCCCAAGTGCTGACAGACCCCGGCATAGACTTTTCGGATGTTGAAAAACAGCAGAAAGAATACGAGAGCAATTTTAACTCTACGATAAAGTGCGAGGGTGATGCACCCGCCCAAACACGTGTCGTTGTTCTTTCATATCCCAGGTATTGCCGGTACCGAGCTTTACTGCGTCGATTAGAAGGCGCGGAACCTTCCTGGCTATGTTCTTCGGTCGCAGCAGCCCTCGGAGGATTCACTGCTCTACCAGGAACAAGAGTTCTATTTTGCAGAGACACCTTCGACTACCCTGACCTCGAAACTCACGAACTACTCTGCAATCACTTAGcGCCAAAATTAAAGGGCAGACCTAgaagaaaacggaaaaaacGTAGCACATCACCTGGCGAATCGAGTAATGAGAGTGAGGCCTCAGTCGCCTCTACCTCTAAGACAGTTTCCGCCAGTATTGTACCAGGACTTCGACCACCCTCATCCGGGGTTCGTCGTAGCGAGAGAAAGACGAGTGCCGAGGAGAAGAGGTTCATCTCGGACGTTCAAACTTTTATGAATTCGCGGGGAACGCCAGTTGGAAAAATGCCGTTATTAGGATACAAACAAaTTGATCTGTTCCTGTTTTACACAAAAGTTCAAACAATGGGTGGATACGAGTCTGTAAGCGCTAGCAGACTTTGGAAATCGATTTACGATGAAATAGGTGGTAATACAGGATCAACTAGTGCTGCAACAATAACGAGGAGGCATTACGAAAGgCTGCTTCTACCTTTCGAAAGGCATCAGCGTGGTGAAGAGATAAAGGTGCGACCGGCACATGGGAGACGTTCAAAAACCAGCAGTATCTCggaagaaattgaaatcaaaCAGGAAACTGAGATTCCAAGTCCGTCAGAAACGCCACCGACTTATACCAACACTTCAAATAGTCCGACTTCAACCACAGTAACTCCGCCTTTGCAGACAATACTTTCGACGCCGTTTCTTCCTGGAGAAAAGCCGAAATCTGAAGTTGGAAAAATCTCGTCGTTGCGTAGCGTTCGGGTAAAACCTGAACGTCTTAAATCGCTGAATACTATAATAGCGAACGCGCCAACCCCGTGCAATCAAGCAATTCTTCAACTACCGAGTCCACCACCGTTGACGAACACACCTGTAACAACGCCGACTAGTACACCTTCAACGACACCAATCGACGGTCAAAGTGTCCTCGAAAGACAATTAAACAGCCCCTTAATGTCTCATCAATTACCACCGTCGTCAACACCGCCGATAATGCCGGTTAATACGACAAATACAAACGCCTCGGCTGTTGTAACGTTGACACCACCCCCCGAAAAGGATATAAAAGAGTTAAAACTCGACCCTAAACAAACTGCCCTGCTGGCACAGGGTAAAGAAAATATTCCACTATTTGGTGAAAAGACTATAATGTCTGTACCGCCCCGATCACCTGAAGTTATTGACCTAGAAACCGATTCGGAAACGAATAGTAGAGATAAGATTATTATTCCAAGTTTTAAGAAACGTAAACTTGAAATACTTAGGGAAGGTGGACTCGAGGTTACTGCCGTTGACTTGGAGGCAAGACCCAGTGTCATTCAGGCCACTATAACACCCGTTGTTTTACCAACACCAACAATCGTcaaacaacaacagcaacaacaagcTGAAGAAAAGACTGTTCATACTGCTAGCACTCCGGTTTTAAACAATTCTAGTACTAAATTAATCTCTGTTACTGTAACGCCAGACATTAGCCATATGCTGCACTCCCCACAGGATAATCAAAACTCACAAAATCGAGGATTACACAATCAACACCAACATCTACACCAACACCAACACCAACACCACCATCAtaatcagcatcagcatcagcatcagcataGTCAGTCTAAACAACAGCCAACAAACAATAATACCTCGATGAATAACAACAACGTTGTTAACAGCAGGGTGATAAATCTCGGTAGTTCAAACAACACGACTTTGTTACAGTTGTATGCAAATGCAAACGTCGTTATTCCATCTggtaataatagaaataatagaaattttgGACCACAAACACCAAACAGTAGGATAGCACCGCCTAAGGTGACGCAATCTAGATCGATATTTTCTCATAGTGAGAGAATCGTTTACGGTAATCCAAAGGATATAATGATGCCACAAAAATATGCAGCGGCTCAAACTACTACTAGTAGTACTACCACCACTACAACAACTACTACTACTACGACTACGACAACTGGTGTTTTAGACCTGACACAAAAGACGGATGAAAAACCGACAACTTTTAGCTCTAGACCGAGTTTGGAGATCGTTAGAGTACCGATAGTACCGAGACCTAATCCACTGAATttagatatgaaaaataaggaCAAACAATTATTGTCTAATGAATTACCAAAGAAAAATCAGAGTTTTAACTATGCAGCTAATATGATAGACACGAGAACAATGGTGTCTAATAATTTGGAAATAACTTTGGTCAATCCTAGTAGTAAACAGAAATCATCGccacagcagcagcagcagcagcagcagccacaacaacagcaacaaatATTATCACCGCTTGTTCATAGACCGGGGAATAATAATTCTGGTATTCATCAGCATCAGCCAAGAAGACAGCAACAACATGTTAATGGTAAATATACGATGAGGAATGATACACCGTCTTCTTACTCGACGAGAAAACCTAATCAAATGGTGATACCAAATATTCCAAACATCGCTAATGTGCCGAGTCTGAATCATCTTAATAATATTGCCAACTCGCCTTATGCGAGAACACTAGCAGTTGATGGAAGAAAGTCGGAAGTGACTGGTAAGGAACATCGTAGAAGTATAAGCGAGAGCGAAAGATGTGGAATTCctcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcatcAGCAGCAAGAAGTTTGCGATAGGCAAGGGGGTGGAGATACGCAGCAAAGACATCATCACGGTACAAATGTAACGAGTAATTATCACTCTTCTTCACCGTTGCCACCTATGCCACCAAATCCGGCATTTCTTTCGCAGTTAAATAATCATGGTAAATATTTACCCATGTTAGATCCAATGTATTATTCTGCACTTTATAACGGTATGTTTCCACATCCTATACCACCATCAGCGTCGTTTTTACCGCCTGAATTAAGCGCGTATTATAAAGAACTCCTAGCTACTCAACCTGGAAGACTGCCGATGGCCGGACAGCCCGCTGTACCGACATCAAAATAA
Protein Sequence
MMLICDIRPLQDEVLTISEKVVVRVNDLVTWLSPSLEWSWGREVSSPPSTTCSSSSPDNSPRKDDAPLPQVLTDPGIDFSDVEKQQKEYESNFNSTIKCEGDAPAQTRVVVLSYPRYCRYRALLRRLEGAEPSWLCSSVAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSTSPGESSNESEASVASTSKTVSASIVPGLRPPSSGVRRSERKTSAEEKRFISDVQTFMNSRGTPVGKMPLLGYKQIDLFLFYTKVQTMGGYESVSASRLWKSIYDEIGGNTGSTSAATITRRHYERLLLPFERHQRGEEIKVRPAHGRRSKTSSISEEIEIKQETEIPSPSETPPTYTNTSNSPTSTTVTPPLQTILSTPFLPGEKPKSEVGKISSLRSVRVKPERLKSLNTIIANAPTPCNQAILQLPSPPPLTNTPVTTPTSTPSTTPIDGQSVLERQLNSPLMSHQLPPSSTPPIMPVNTTNTNASAVVTLTPPPEKDIKELKLDPKQTALLAQGKENIPLFGEKTIMSVPPRSPEVIDLETDSETNSRDKIIIPSFKKRKLEILREGGLEVTAVDLEARPSVIQATITPVVLPTPTIVKQQQQQQAEEKTVHTASTPVLNNSSTKLISVTVTPDISHMLHSPQDNQNSQNRGLHNQHQHLHQHQHQHHHHNQHQHQHQHSQSKQQPTNNNTSMNNNNVVNSRVINLGSSNNTTLLQLYANANVVIPSGNNRNNRNFGPQTPNSRIAPPKVTQSRSIFSHSERIVYGNPKDIMMPQKYAAAQTTTSSTTTTTTTTTTTTTTTGVLDLTQKTDEKPTTFSSRPSLEIVRVPIVPRPNPLNLDMKNKDKQLLSNELPKKNQSFNYAANMIDTRTMVSNNLEITLVNPSSKQKSSPQQQQQQQQPQQQQQILSPLVHRPGNNNSGIHQHQPRRQQQHVNGKYTMRNDTPSSYSTRKPNQMVIPNIPNIANVPSLNHLNNIANSPYARTLAVDGRKSEVTGKEHRRSISESERCGIPQQQQQQQQQQQQQQQQQQHQQQEVCDRQGGGDTQQRHHHGTNVTSNYHSSSPLPPMPPNPAFLSQLNNHGKYLPMLDPMYYSALYNGMFPHPIPPSASFLPPELSAYYKELLATQPGRLPMAGQPAVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01412887;
90% Identity
-
80% Identity
-