Basic Information

Insect: Tenthredo mesomela
Gene Symbol: -
Assembly: GCA_943736035.1
Location: CALSEY010000174.1:454227-457739[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 8.8 1.8e+03 1.1 0.7 2 15 417 430 416 438 0.76

2 9 0.0074 1.5 10.7 1.9 1 19 444 462 444 463 0.97

3 9 0.043 8.9 8.3 2.2 1 21 481 501 481 503 0.81

4 9 0.012 2.6 10.0 0.5 1 23 546 569 546 569 0.96

5 9 0.057 12 7.9 0.3 3 21 577 596 576 597 0.88

6 9 2.7e-05 0.0056 18.4 5.5 1 23 634 656 634 656 0.98

7 9 0.00019 0.039 15.7 1.8 1 23 662 684 662 684 0.98

8 9 0.00098 0.2 13.5 0.7 1 23 691 713 691 713 0.97

9 9 0.068 14 7.7 1.0 2 12 722 732 721 735 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	8.8	1.8e+03	1.1	0.7	2	15	417	430	416	438	0.76
2	9	0.0074	1.5	10.7	1.9	1	19	444	462	444	463	0.97
3	9	0.043	8.9	8.3	2.2	1	21	481	501	481	503	0.81
4	9	0.012	2.6	10.0	0.5	1	23	546	569	546	569	0.96
5	9	0.057	12	7.9	0.3	3	21	577	596	576	597	0.88
6	9	2.7e-05	0.0056	18.4	5.5	1	23	634	656	634	656	0.98
7	9	0.00019	0.039	15.7	1.8	1	23	662	684	662	684	0.98
8	9	0.00098	0.2	13.5	0.7	1	23	691	713	691	713	0.97
9	9	0.068	14	7.7	1.0	2	12	722	732	721	735	0.88

Sequence Information

Coding Sequence: ATGTATGGAATTCCAAGATTAAAAGAGTGCCAAGAATTATATGAAATAATGGAATTAAACGAGGATACCATTTCCCCAACATTTCTATGTAGATTATGCGCAAACAGTGGCAATGATATGGTTCATATATTCGACGCTAACGAATTACACGATAATAGTATAACACAGAAGATTAAAGACTGTAGTCTACCTATCGTGGTGACGGAGACTGATAATTTGACAAAATATGCCTGCCGTATTTGTCTCGGCAAATTAGAACTTTGTTATCAGTTTCATAAAACTGTAGCAGAGGCTGAAAATCAACTTCTTGCATATATCGGAGAGACAAAATCGAGTAAAATAATTGCGGAGACGGAAGAATATCGAAAGACTCTTTCGGTATATGACGGAGGACAACGTAGCGCTAGAAAACTCGCTAGTAATGGAATGATAATAAAACCTCCTGCTCAAATATGCCATACAAAGAATCAATGCAGCAAAATTAGTAAAAATAGAAGTAGAGAAGATGAATGTAAGAAAGAAGATTTAAACATGGATTTTTTGAATGCTGGTCAAACATCTGATATTGAACAGAATAATATAAGGCAGTTAGGGAAAGAATTGAGATCTGAAAAACAGGTGAATAGATCTGATTCGGGATTTTATTCTCCTCCGATTACTAGGAGTCAAAGTCAGACAGAGTGTGATAAgaagaagaagaagaagaagaagaagatgaagaaaaagacgagaaaatatactaagaatgatgtcattcctatttgtgaaAATAAACATAAGGATAAAAGACCGAAGCTGGATGAATCAATGAAGACTATAGATTTACAAGAAAAATCAAGGTCTGAAAAGGAAGAGGATATTCCTGATTTTGTATTCTATTCCCCTCCGATTACCAGGAGTCGAAGTCACACGGTATCTGATAGTGTGAAAAAACCAGAGTCAAAGAACGATTCCAGCGATGACGATAACTCCGTTTGGGAAGAGAAATTCGAGGATCAAAACCCAAAGCTGAACATTCCAATTAATCGAATACATTTAGAAAAAGAATCAGAGTCTGTAAATAAGGAGCATATATCAGATTGTAAACTTTATACACTTCCGATAACCAGAAGTAAAAGTCCCACAGTTTGTAATAGCGGGAAAATAACAGAAGGTAGTAAAGATAACAGCGACGATGACATCCTATTTTGGGAAGCGAAATTTAAGGATCAAATTTTTTCCGATCAAAGCGTTGCTTACGATGAAATAACGTGTAGAATTTGCGAAGCGAGTTTTCAAACTGCTGAAAAATGCTATCTACACGGTAGCGTTCACGCTTGGACAAATTATTATCCCTGTTGTGTTTGTAATAAAACTTTCGATACTGAAAATGAATGGAAAAAACACAGTCCTGAACACAAAGATATTAGACTAGAATTTGAAAACAGGGATATAATAATGCACGACTGTAACGAATGCGGAAAGAAATTTGTTTCCGAAGCCAGACTTAAGTTTCATAAACTTTTTCATAAATCTAGTGCTGAAATAATACCCACCAAAAGAGGATCTCCAAGTTTACAACAATTATGCTGGACTTTGAATCAGCGTCTCTTAGCTGAGACTAGAAAAGATCCCTTAAGTAGTAATCGAATACTTCATAACTGTGAAGAGTGCGATACAGTTATGGAGTCAAAAAAATCTCTCGAAGAACACGTACTGACTTCGCACGACAAACAACAGCAAGAATTTTGTTCCAATGCATGTGGAAACCAGTTTAGAACTGAAGAACAGCTTAATGATCATCAAAGGAACCGTGATCGTACTTTCGAATGTACTTTGGGCAAGAGAAGATTCGACTCTAACGATACAGTAAAAGTTCACGGAGAAGTTCCCCGCAGGCAATCGTTGACTGAAAATAAATTTTCATGCGCTCATTGTGGGACGACATGCACGCGTAAAGGGCATCTGATTATTCATCTAAGAAGTCATTCCAAAGAGCGAATTTACAGCTGTGATATATGTACGAAAAAATTTGCGACTAAGGAAGCGAGGAATAATCACAGTAGAAAGCACACTGGTGTCACACGTTCTTTCAAATGTTCTAAATGTGATAAGAATTTTGTATGGGAAGATTCGTTGAAACAACACGAAATTTCTCATTCATTAAATAATACAGTGCCTTGGAAGTGTACTCGGTGTGATAAATCGTTTAGTACTACAACAGAATCAAGACATGATTATTTGAATGTATTACATAATGATAGACCATACAATTGCGATCCGTGCAAAATTTCGTTTAAAGAACAAAGAATCAGTCATGTCGCCGTCCTGGTAACCTTGTAA
Protein Sequence: MYGIPRLKECQELYEIMELNEDTISPTFLCRLCANSGNDMVHIFDANELHDNSITQKIKDCSLPIVVTETDNLTKYACRICLGKLELCYQFHKTVAEAENQLLAYIGETKSSKIIAETEEYRKTLSVYDGGQRSARKLASNGMIIKPPAQICHTKNQCSKISKNRSREDECKKEDLNMDFLNAGQTSDIEQNNIRQLGKELRSEKQVNRSDSGFYSPPITRSQSQTECDKKKKKKKKKMKKKTRKYTKNDVIPICENKHKDKRPKLDESMKTIDLQEKSRSEKEEDIPDFVFYSPPITRSRSHTVSDSVKKPESKNDSSDDDNSVWEEKFEDQNPKLNIPINRIHLEKESESVNKEHISDCKLYTLPITRSKSPTVCNSGKITEGSKDNSDDDILFWEAKFKDQIFSDQSVAYDEITCRICEASFQTAEKCYLHGSVHAWTNYYPCCVCNKTFDTENEWKKHSPEHKDIRLEFENRDIIMHDCNECGKKFVSEARLKFHKLFHKSSAEIIPTKRGSPSLQQLCWTLNQRLLAETRKDPLSSNRILHNCEECDTVMESKKSLEEHVLTSHDKQQQEFCSNACGNQFRTEEQLNDHQRNRDRTFECTLGKRRFDSNDTVKVHGEVPRRQSLTENKFSCAHCGTTCTRKGHLIIHLRSHSKERIYSCDICTKKFATKEARNNHSRKHTGVTRSFKCSKCDKNFVWEDSLKQHEISHSLNNTVPWKCTRCDKSFSTTTESRHDYLNVLHNDRPYNCDPCKISFKEQRISHVAVLVTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -