Tmes002781.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- znf711
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000021.1:1139527-1157599[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 4.8 9.9e+02 1.9 0.3 1 22 378 399 378 402 0.88 2 16 1.9 4e+02 3.1 1.7 1 23 517 541 517 541 0.91 3 16 0.0011 0.23 13.3 0.1 2 21 598 617 597 621 0.90 4 16 0.00033 0.068 15.0 0.2 3 23 636 657 636 657 0.95 5 16 0.084 18 7.4 0.3 1 23 672 696 672 696 0.92 6 16 0.034 7 8.7 0.2 2 23 715 737 715 737 0.95 7 16 0.0034 0.71 11.8 0.1 1 22 742 763 742 763 0.95 8 16 0.26 55 5.9 0.5 1 23 801 823 801 823 0.94 9 16 4e-07 8.4e-05 24.1 4.2 1 23 847 869 847 869 0.98 10 16 0.0044 0.92 11.4 0.1 1 20 875 894 875 896 0.95 11 16 8e-05 0.017 16.9 1.3 1 23 915 937 915 937 0.98 12 16 0.048 9.9 8.2 0.0 3 23 944 967 942 967 0.88 13 16 0.27 56 5.8 1.3 1 23 977 1000 977 1000 0.95 14 16 0.0077 1.6 10.7 6.6 1 23 1028 1052 1028 1052 0.98 15 16 0.017 3.5 9.6 1.5 1 21 1058 1078 1058 1083 0.93 16 16 0.29 60 5.7 1.9 1 23 1089 1113 1089 1113 0.93
Sequence Information
- Coding Sequence
- ATGGAAAATTATGAGGACGAGGACGACACACATTTCTGCATAAAGTGTCATGCGACTATATCCGGGCTGGAGAATTACGTGCGTCATCGTCAAGCCGGATGTTGTCGACTCACGGAAAAGGAAGCTACAGTTCAGGGGACGGTCAATACACCATCGACAGTTTCCTATCCGGAAGTCCCAAACGCGGATGCGTTTTTTAATTCACTTGAACTTCAGAGCAGCGCGAAGAAGACACCTCGACGCGTTACCAGGGGAAAGGCGAACCGTGAAAGAAAAGATGAGAGACAATCAGAGGCTAGGAAAAAGCCTCGGAGGTGTCAGACTGAAGCTGAAGACGTTTCTTCGAAAAGCGTCGTCTCCGGGAAGCTGAATATTCTTCCCGTAGACGCGGAACTGGACAATCCAACTGACCACCTCAGCATACCGTCGCTTGTCGGATTCCCTGACATCGTAACTTCGTCGGCTTCAAAACCAGTCGTCACAGTTTCATTGAGTAAAAACTGCGCGACAACTTTAATGATAAAAATGGAGCCTCCGAATTACACGCCGAAGCAAGATGCACCGCTAGAAAATTCCCTGGAGACATTCATGGCCGATGAATCGGTCCCGAAGTCCGCTGGCTCCTCTTCAAAAAGGCGCGAAGTTTGGCTCGGGGACAATATCCTTGCTGATCATCATCTCGGAAATAGTACAGACAACAAAGGAATCGCGCACTCTTCAGCTCTCTCACGATACGCGGATTACGACTTTGCCGACGACGTGGACTCCGAGGACGAGTGCACCCTCGACGAAGATATGGGCGAGGATGACTCCTGCTCTGAAACTGATGACGCTAACGACCCTGAGTATCCACCGCAAGGACACACTGGAGGAAAATGGAGACCAGGACTGGCTACTGGTACTCAGGTCGACGCTGAGCTCGTCGAGGATGAGGTTGAACCTGATGAAGACAACCCGGAACGACCACCGCCTTCGCATACTGGTGGGAAGTGGAAACCCACGGATACCGCACAAGGCCAGAGAAGTGACGACGTCGAGATTAAAGACGAGAAAGAAGCAGCTACACAACCGCCGCCAGGACATACTCGAGGGAAATGGGTTCCGGGTGCTAGGAGTGATCAGAACAACGGATTTTACTGTAGTCCGTGTGGCCGGAGACTGGCTTCTCGATTAGTCTACAATCGGCATCTACTTTCGGAACTTCACGCGAAGCGAAGCATCAAGGAACTGGATGGAGTGCTACGTCTTCCTCGAGGAGTCGAGACTCTGGGTTTGAAAGAGAGTCGTGGAACCTATCGTCGTAGAGTAGCCACGTGGAAAGTCCAAGAAAATGAGGAGATCCGCTCTTCAGATGGTAAGAAAAAGTCGAGAAATCGAAGACGAGAGATCATTTGGTGCGAGATGTGTAAAACCCGAGTTCGACGTCCCCAAATGGGAAAACACCTTCTATCTCATTATCATTGTCGCGTTGCTGGTGTCATTCCTCGCAGTCCCAGAGCACGCGCCTTCCTTCTGGACAATATGGCTAATGTTGTTCGACAATGTCCCTTCCAATGCGCTGGATGCCGTTTCTACTGCAATACTGAAGAAACTTTTCTCCTTCATTGGCGATCCGAACTTCACATCAACGCGCATCGAGAGATATCGGGCAGCTACCACTGCACATCCTGTGACTTTTGGTGTGACGATAACCCAGAGATGGAGAATCATGTGACCAGTCTGGGTCACAGACAAGTAGTTTCAATGGTGAACGGTTCAGTGCCAGTTGTGATAACCCGGCAGCGTCATTTGCCGTGTGACACTTGCGGCCAAGCTTTCAGATACAACATTCAACTGAAGCAGCATGTATCTGAGACAGGTCACGCGGCAGAAACCGCATCTGACGTGTACCAGTCGCGAATTTGGTGTCCTCAGTGTAATCAAGTGTTTCGTTCCCTGATCGCTTTGCAACGACACCAATTAGCAACTCACGTCAAGGACAAACCCGGTCAATTATCCTCCCGTGCTGAGCCCTATTTCTGTTCTACATGTTCTTTGAACTTTCCTTCCGCCGAGGAAGCGGTTAAACATCGGAAAACTCCTCGGCATAAGGAGCTAGTTGACACTAGAAAGAGCGCTCTTAAAGGTATAAAAAAGCAGAGGAAATGCCCTAACTGTGATCTCGATCTTCCCGATCTGCAGCAACTGAAACAACACCTTCTTCAGTCACACGTCGAGCTCTGTCATCGGTGTCCGAGGTGTGGTGTGACCTTTGCACTGCCCCAGGATCTCGCGCTGCACACAAGAAAGGGAGAATGTGTTCAGAGCGAGGTGTTGAAGGCTCGTTCAGAAAGAGCGGACGATGAGGATGAACAAGAAGTTGGAAGAGGAGGAGGAGGAGGAGGAGGAAGTTCTGGGAATTTCCGGTGCAGTCAGTGCGCTTACGTTACTAATTCACAAGCCGAATTTATTTACCATGAAACTTTACACGCCGGTTATTCGGTGGAAGTCGACACCTTGGAGACCGTCGATGGCAGTACCGCTAAAATAAGACCAAATTTTAGCTGTCCAATATGCAAAAAATCATTCAAAAAACAACACTATCTTCTCAGACATATACGAATGCATACCGGTGAGAAACCGTTCCCTTGTCCGAGTTGCAAAACAAATTTTGCAAACAGGGCCAAGCTCAATCTTCATATCGCAAATTGTTCGATCGGTGATTCGGCATCGTGGTCAGAGAACACGAGACGACATAGAAATTACGTCTGTCTCGAGTGCAACAACGCTTTCTACACAAACCATGCATTGCAACAGCACATGCTACGTCACACGGGTAAAAAATTCCTTTGCGGACTACCCGGGTGTCCAACTGCCCTCAGGACTCCAGGGGAGCTCAAGACCCATAGAGAACGTGTCCACAACGCTTTGGAAACAAACAAGAAACATCATCAGTGTAGAGAATGTTCTTACCAAGCCGTATCTGTCGCACAGCTAAAAAGACACGAAAAACAGCAGCACAGAAATCCTGGGGAAGGTACGAGCGTTCGTAACCGCGGCGAAGACACGGGCGAGGGCGACGCCGAAGGTGCAGCGGGTGGTTTCCGTTGTCCTTATACGGACTGCCACTTCAAGTCAAAGCTCAAGTCGCACCTACGTAGGCACCTCAGGTTACATACTGGCTCTAAACCGTATAGATGCGTGCATTGTTCCTACGCGAGTAACAATTTCGAAAATCTTCGAAAGCATGTGCTTTCGACTAAGATACACCCAGGCAAGAGTATATACGAATGTACTCATTGCGATACATATCGTACGAATTTCTCGCGGGAGTTAAGGGCGCATCTTCTTCAGGAACATCGGGATAACTTTCCTACATCCGAGGTTGCAGCGAACCACGTAGCCGCTATGTACAGTGCTGAGCCGGATCCTTCGTCTATGGACAACCCGTCGTCCTTGTCTTGTCGTATTTTGTTGCTAAAGAGAGAGAATCTTTAG
- Protein Sequence
- MENYEDEDDTHFCIKCHATISGLENYVRHRQAGCCRLTEKEATVQGTVNTPSTVSYPEVPNADAFFNSLELQSSAKKTPRRVTRGKANRERKDERQSEARKKPRRCQTEAEDVSSKSVVSGKLNILPVDAELDNPTDHLSIPSLVGFPDIVTSSASKPVVTVSLSKNCATTLMIKMEPPNYTPKQDAPLENSLETFMADESVPKSAGSSSKRREVWLGDNILADHHLGNSTDNKGIAHSSALSRYADYDFADDVDSEDECTLDEDMGEDDSCSETDDANDPEYPPQGHTGGKWRPGLATGTQVDAELVEDEVEPDEDNPERPPPSHTGGKWKPTDTAQGQRSDDVEIKDEKEAATQPPPGHTRGKWVPGARSDQNNGFYCSPCGRRLASRLVYNRHLLSELHAKRSIKELDGVLRLPRGVETLGLKESRGTYRRRVATWKVQENEEIRSSDGKKKSRNRRREIIWCEMCKTRVRRPQMGKHLLSHYHCRVAGVIPRSPRARAFLLDNMANVVRQCPFQCAGCRFYCNTEETFLLHWRSELHINAHREISGSYHCTSCDFWCDDNPEMENHVTSLGHRQVVSMVNGSVPVVITRQRHLPCDTCGQAFRYNIQLKQHVSETGHAAETASDVYQSRIWCPQCNQVFRSLIALQRHQLATHVKDKPGQLSSRAEPYFCSTCSLNFPSAEEAVKHRKTPRHKELVDTRKSALKGIKKQRKCPNCDLDLPDLQQLKQHLLQSHVELCHRCPRCGVTFALPQDLALHTRKGECVQSEVLKARSERADDEDEQEVGRGGGGGGGSSGNFRCSQCAYVTNSQAEFIYHETLHAGYSVEVDTLETVDGSTAKIRPNFSCPICKKSFKKQHYLLRHIRMHTGEKPFPCPSCKTNFANRAKLNLHIANCSIGDSASWSENTRRHRNYVCLECNNAFYTNHALQQHMLRHTGKKFLCGLPGCPTALRTPGELKTHRERVHNALETNKKHHQCRECSYQAVSVAQLKRHEKQQHRNPGEGTSVRNRGEDTGEGDAEGAAGGFRCPYTDCHFKSKLKSHLRRHLRLHTGSKPYRCVHCSYASNNFENLRKHVLSTKIHPGKSIYECTHCDTYRTNFSRELRAHLLQEHRDNFPTSEVAANHVAAMYSAEPDPSSMDNPSSLSCRILLLKRENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00060621;
- 90% Identity
- -
- 80% Identity
- -