Basic Information

Insect: Tenthredo mesomela
Gene Symbol: -
Assembly: GCA_943736035.1
Location: CALSEY010000270.1:246344-248602[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.079 16 7.5 2.8 1 23 354 377 354 377 0.95

2 10 7e-06 0.0014 20.3 0.4 1 23 383 405 383 405 0.99

3 10 1.5e-06 0.00032 22.3 1.5 1 23 411 433 411 433 0.99

4 10 0.0061 1.3 11.0 0.2 1 23 439 461 439 461 0.99

5 10 2.8e-06 0.00059 21.5 0.2 1 20 467 486 467 487 0.96

6 10 0.013 2.6 10.0 2.9 1 23 496 516 496 516 0.95

7 10 1.4e-06 0.00029 22.5 0.5 3 23 524 544 523 544 0.98

8 10 0.00014 0.029 16.2 1.4 1 23 550 572 550 572 0.98

9 10 0.0069 1.4 10.8 2.6 1 21 578 598 578 601 0.96

10 10 0.079 16 7.5 7.1 1 23 607 630 607 630 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.079	16	7.5	2.8	1	23	354	377	354	377	0.95
2	10	7e-06	0.0014	20.3	0.4	1	23	383	405	383	405	0.99
3	10	1.5e-06	0.00032	22.3	1.5	1	23	411	433	411	433	0.99
4	10	0.0061	1.3	11.0	0.2	1	23	439	461	439	461	0.99
5	10	2.8e-06	0.00059	21.5	0.2	1	20	467	486	467	487	0.96
6	10	0.013	2.6	10.0	2.9	1	23	496	516	496	516	0.95
7	10	1.4e-06	0.00029	22.5	0.5	3	23	524	544	523	544	0.98
8	10	0.00014	0.029	16.2	1.4	1	23	550	572	550	572	0.98
9	10	0.0069	1.4	10.8	2.6	1	21	578	598	578	601	0.96
10	10	0.079	16	7.5	7.1	1	23	607	630	607	630	0.96

Sequence Information

Coding Sequence: ATGACGAACGTGCGGAGATCAACGGTTGAGAATTTTTGCGCTGTGGAATCGAGGGAGGAGGTACACCTCACGGAATTACTTCCAGTCAAACAATCGGCAATCTCGAAGCACGATAATGACAAGGACGACGTCGTAGCGGACGCTTTTAAAGCCTTACGTGAAGGAAGCAAACACTTTTCTTTGAGCAGAAACGAGTTTTGCACTAAAGGCGATGCCGATTTTTCCCAAATACTCAAAGACCCGGCGGAAGGAAGTGCGGACAATATCGGGAAAGAGTGTGACGAACAGTCTGAGGAAGAGTGTGTCGACCAGTCTGAAGAAGAATGTGATACATCAACCACCGACGAAACGATCAGCAAGAATTCTGCAAAGCGGAAGGGGAACCGGGTATTCAAAAAGCGAATGAAGTATATCCATACGAGAAAACTAGTGCAGCAGATGAAGGAAAAGATCAAACATAACCAGAAGGGAAAGAACATTTCCGTTATAGCCGGCTCTAACGAGTTTCAAGTATCAAATCTTCGCAAAAACAACGGTACCAACATCCTCCACAATTCCGATGATCAGAACAGGCTCTCACCCCTCTCGCAAGACGTTGATGGTGATAAAAACAGCGGATTTGTTGACAAGAACGGAGATATTTCTGACGAAATTTATGCATTCCGTCAGGATAAGAACACCAAGGGAATGAGAAAAGTTAATAAGAAGAAAGGCAACCAGGAAACTTTGTCAAAAGGTAAAAAAAAATCAAATTCTAACGGGAGACTAAAAAAAACGCGGAGCGATCAGGACGTAGCCATAACCTGCAAACGCAATACTGCATCAATAAAGATCAGGAATAACAAAAGGAAAGAAAAACAAAGTCAAATCGAACGAGAAACTGCATCAGATAGTCAAGAAGAGGGTCTGCGGGAAAAAATCGACGCGATAATTCAGGCTAACTACGTAATGGAGCGTAAGAACAACAACACAACTCGTGAAAACCGTAACAAGCTTAAGGAGGCCTTGGCCAAACGTGCTCAGATTCGTAACTCTGATGAAGAATCATCGGAGAAAAAACACCATTGCGAAAGATGCAGCGCGAGATTTAAGGGTAGCGGTGGTCTTAGGACACATTTCAAAGTAGTGCACGCCGTTGGTCCAGGGTTTACCtgcgacgattgtggcaaagaatttcctctcaaggaaagactcaagctacatgtcaggacacacaccggatacaaaccgtacaaatgcgcagattgtcacaagagtttcgctcgaggaggacagctcgctcagcaccgtcgaacccacacccaggcaaaaccctaccgttgcgttatatgccccggcatgttttcatgcgctgcgaatctcgccctgcacattaaacgtcacaacggccaaaaggaccataagtgcgagatctgcggacgcgcctttgttaggcgagatgcgctgaaaaagcaccttgaatgcctacacaaggacgttaagtcatttctctgctcgatatgcaacaagaccttcaagggacaccttccacaacacatgaggactcacgcccaggacagaccacacggatgcgcaacttgcggccaaaggtttgcccaaaaatcgcaattgaccgttcatcagagaacccactcgggacagagaccatttcgctgtttagtttgctggcaggcctttgcccactcgaccgctttgaaactccatactagaagacacaccggagagagaccgttcaaatgtgccgaatGCAGCGCTGGTTTCACCCAGTTACCACATTGGAAGAAGCACATGAAGTGTGTCCACGGACGGAATGATCCCTACTGCTGCAAAAACTGCAACACATTTTTCAGAATAAAGAACGACCTCGAAACTCACGAGAAGTCTTGTCATCTTGCTGATGAGCCAATGGAGATCGACACCGATAATCGTGCAGGGCGTTCTGTCGTCCCAAAATATCGAATAATGACTGTAGAGAAGATGAGACTACTTCTAGCCGTCTTGTTTAAACGAATTTCGAAACCTGAACGACTGGACGAACTGGGCTTCGGAAAACGACTGATAGACGAAGTGCTGAAAGACTCTCTTCTGTCCGCGGGTAAGGACCCGGCCGATGAGGATGATGGCAATGAGTTTGAAGTACTCAAGCAAAATTTGGCCATGTTTTTGAAATGGACAGTGCCCAAAGAGCATTGGGAAGCTTTCAAAAAACTGAAAAAATCGCCGGAAGAGATACTAGAGACGCTGACCGTCAGCCAGTAG
Protein Sequence: MTNVRRSTVENFCAVESREEVHLTELLPVKQSAISKHDNDKDDVVADAFKALREGSKHFSLSRNEFCTKGDADFSQILKDPAEGSADNIGKECDEQSEEECVDQSEEECDTSTTDETISKNSAKRKGNRVFKKRMKYIHTRKLVQQMKEKIKHNQKGKNISVIAGSNEFQVSNLRKNNGTNILHNSDDQNRLSPLSQDVDGDKNSGFVDKNGDISDEIYAFRQDKNTKGMRKVNKKKGNQETLSKGKKKSNSNGRLKKTRSDQDVAITCKRNTASIKIRNNKRKEKQSQIERETASDSQEEGLREKIDAIIQANYVMERKNNNTTRENRNKLKEALAKRAQIRNSDEESSEKKHHCERCSARFKGSGGLRTHFKVVHAVGPGFTCDDCGKEFPLKERLKLHVRTHTGYKPYKCADCHKSFARGGQLAQHRRTHTQAKPYRCVICPGMFSCAANLALHIKRHNGQKDHKCEICGRAFVRRDALKKHLECLHKDVKSFLCSICNKTFKGHLPQHMRTHAQDRPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLHTRRHTGERPFKCAECSAGFTQLPHWKKHMKCVHGRNDPYCCKNCNTFFRIKNDLETHEKSCHLADEPMEIDTDNRAGRSVVPKYRIMTVEKMRLLLAVLFKRISKPERLDELGFGKRLIDEVLKDSLLSAGKDPADEDDGNEFEVLKQNLAMFLKWTVPKEHWEAFKKLKKSPEEILETLTVSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00939840;
90% Identity: iTF_01414455;
80% Identity: -